Triplophysa dalaica: 130409986
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Entry
130409986 CDS
T09616
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130409986 (chd5)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130409986 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
130409986
NCBI-ProteinID:
XP_056590250
LinkDB
All DBs
Position
21:6057642..6082535
Genome browser
AA seq
2017 aa
AA seq
DB search
MDCYGNRPHVTIWALMPGSLSNEEEGQDDMDFEDDVPDEDEEGERERSSVRSVPLSPLER
FFHEDSVNQHKKKKPSKITEGKEEKPKLKKKKKKEGLPCELDDMSDREDRGHRSGSESST
YGTLKKKKKKPKEKKEKKTKQRKKDEDDDDDDDDDGSMKEPKSSSQLMQEWGLEDVQYAF
SEDDYKTITNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVA
AAVAAAVETVNVAPPICIRSIQQISPSGPIKKAKTKEGKGPGAKKKSKPGKETKKKGKPK
KSKSKAGQGGKRKKGSSSEEDFLDDFSDFDDISIHSASVRSDTSAPPKKKTNRRGRKKRK
REDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG
IQWEAKDDEEEEDEAAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPN
GEWLCPRCMCPPLKGKVQKILHWAWGDPPLPPEVTLGQDGEKVDSLAKPPLKGRPERQLF
VKWAGLSYWHCSWVNELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRRSKD
PHYAAMEERFYRYGIKPEWMIIHRIVNHSFDKDGDVHYLIKWRDMPYDQCTWETDDFDVP
EYDSFKQAYWDHREQVLGESQHPLLFRKGKRLKDEGKRREPPPDTPVVDPTIKLEQQTWY
IDDTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPF
LVSAPLSTIINWEREFEMWAPEFYVVTYTGDKESRAVIRENEFTFEDSAVKTGRKVFRMK
KDTPIKFHVLLTSYELITIDQAVLGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKL
LLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRL
KADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKC
CNHPYLFPVAAVEAPVLPNGSYDGNHLVKSSGKLTLLQKMLKNLKDEGHRVLIFSQMTKM
LDLLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA
DTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLV
VRPGLGSKTGSMSKQELDDILKFGTEELFKDDVEAARTMGDNKDGEEGSVIHYDNDAISK
LLDRSQDATEDTEIQNMNEYLSSFKVAQYVVREEDEEEEVQREIIKQEENVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDDLSDNQSEYSVGSEDEDEDFE
ERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDA
FNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGV
MSLVRKKVQEFEHVNGKFSTPDLIPVGLEFKKLNESISSDPNTPVPASPVPTQPSTPVSS
DKTELVSGSQEDKEITEPESAKSSDPEPTMPEPSPAPEKINESEETKSSNVGEKRQEESV
KSDTPPVNSEPSSNQTQLSTKSSEQSANQTALDSGKGKETSHERGENKHSPAKSEEKEPK
RANPDDVKSEEPSENQLNGEKDVRDDTDESHKDDKNSVKTRFMFNIADGGFTELHTLWQN
EERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEINKGNY
LEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQH
LSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILS
RLTSRGNEPPPQQPFPQGSFGCSQMYNSSFAGGFRGPGGTAMVNYSQMPLGPYVSVSSNG
PSVPTSHLEKRSSDVLRDVPTPDLKSVKPSDVICIED
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggattgctatggcaaccgaccacacgtcacaatctgggcattgatgcccggatcgctg
agcaatgaagaagaggggcaagacgatatggattttgaagacgacgtgccagatgaggat
gaagaaggtgagcgtgagaggtcgagcgtaaggagcgtccccctgtcaccgctagagagg
ttcttccacgaggactctgttaatcagcataagaaaaagaaaccaagcaagataacagag
ggcaaagaagaaaagcccaaactgaagaaaaagaagaaaaaggagggccttccttgcgag
ctggacgacatgtctgacagagaagaccgcggtcacagatccgggagcgagagcagcacc
tacggtaccctgaagaagaagaaaaagaaacccaaagagaagaaagagaagaaaaccaaa
cagcggaagaaagatgaagacgatgatgacgatgatgacgatgatggaagcatgaaggaa
ccaaagtcatccagtcagctgatgcaagaatggggacttgaagacgtgcagtatgctttt
tcagaggacgactataaaacgatcactaactacaaagcctttagccagtttcttaggccc
cttattgccaagaagaaccccaagatccccatgtcgaaaatgatgacggtgcttggagca
aaatggagagagttcagcgcaaacaaccctttcaaaggcacctctgcaactgctgtggcc
gcggctgtggcggctgctgtggaaacggtcaatgtggccccgcccatctgtattagaagt
atccaacagatctcaccatctggaccaatcaaaaaagccaaaaccaaagagggaaagggg
cctggtgctaagaaaaaaagcaagccagggaaagaaacaaaaaagaaagggaaaccgaag
aagtccaaatcgaaagcaggccagggtggaaaaaggaaaaaaggctcttcgagtgaggag
gacttcctggatgacttttctgacttcgatgacatcagcattcacagtgcctctgtacgc
tcagacacgtcagcaccaccgaaaaagaaaacaaaccggcgtggacggaaaaaaagaaaa
agagaggatggagacggttacgagacagaccatcaagactactgtgaagtttgtcaacaa
ggaggagagatcattctatgtgacacctgtcccagagcatatcacctggtgtgtctggat
ccagaactggaaaaagcccctgagggaaaatggagctgcccccattgtgaaaaagaaggc
atccagtgggaagccaaagatgatgaggaggaggaagatgaggctgcaggtgaggaggaa
gatgaccatatggagttctgcagagtttgtaaggacgggggagagctgttgtgctgtgac
acctgcccttcctcgtatcacatccactgcctcaacccaccactgccggagatccccaat
ggagagtggctttgtccacggtgcatgtgtccaccactaaaagggaaagtccaaaagatc
ctacactgggcatggggggatcctcctctacctcccgaagttactcttgggcaagatgga
gagaaggtggatagtttagccaaacccccactgaagggccgtccagagaggcagctgttt
gtgaaatgggctgggctgtcttactggcactgctcgtgggtcaacgaactacagttggaa
ctatatcacacagtaatgtaccgtaactatcagcgcaagaacgacatggacgaaccacct
ccatacgactatggctctggggaggaggagcttaacaatgaaaagaggaggagcaaagat
cctcattatgcagccatggaggaacgattctaccgttacggcatcaagccagagtggatg
attattcacagaattgttaaccacagttttgataaggacggagatgtacactacctgata
aagtggagagacatgccatatgatcagtgcacctgggagactgatgacttcgatgtacca
gaatacgacagttttaagcaggcctactgggaccacagggagcaggtgcttggtgagagc
caacacccactgctgttcagaaaaggaaagcgtctaaaagatgaaggaaagaggagagaa
ccccctccagacactccggttgtggatcccaccatcaaattggaacagcaaacctggtat
atcgatgacacagggggcactttgcacccgtaccagctagaaggcctgaactggttgcgc
ttctcatgggctcaaggaactgatacgatcttggccgatgaaatggggcttggcaagact
gtgcagactatagtgttcctgtactccctctacaaagagggtcactccaaagggcccttt
ctggtcagcgcaccactgtccaccatcattaactgggaaagagagtttgagatgtgggct
ccggaattctatgtggtgacttacactggggacaaagagagcagggccgtcatacgtgag
aatgaatttaccttcgaggacagtgcagtcaaaacaggacgcaaggttttccgcatgaag
aaggacactccaataaagtttcatgtgctgctgacatcatatgaattgatcaccattgat
caggctgttcttggctctattacctgggcctgtctggttgtagacgaggcccacaggctg
aagaataaccaatcaaagtttttcaggattctgaatggctacaaaatctactataagctg
ctcctgactggaacccctttgcagaacaatctagaagagctttttcacctgctcaacttt
ctcacacctgagcgcttcaataacctggaaggttttctggaagagtttgcggatatctca
aaagaggaccagattaaaaaactacatgacttactgggaccacacatgctcaggaggctg
aaggcagacgtgttcaagaacatgccatcgaaaaccgagctcatagtgcgagtagagcta
agcccgatgcagaagaaatactacaagttcattttaacacggaactttgaagcgttaaat
tccaagggaggtggcaatcaagtgtcgcttttgaacatcatgatggacttgaagaaatgt
tgcaaccacccctacctgtttccagtggctgcagtggaagctcctgtcttaccaaacggt
tcgtatgatggtaaccacctggtgaaatcctcaggcaaactcactctgcttcaaaagatg
ctcaaaaatctcaaggatgaaggccaccgagttcttatcttctctcagatgacaaagatg
ttggacctgcttgaggacttcctggagtttgaggggtataaatacgagcgtattgacggg
ggcatcactgggggattgcgtcaagaggccattgatcgttttaatgcacccggggcgcag
cagttctgttttttactttctacacgtgctggtggattgggtatcaatctggcaaccgca
gacacagtggtcatatatgattctgactggaacccacacaatgatattcaggcattcagc
agggcacaccgtatcgggcaaaataagaaagtaatgatctatcgtttcgtaacacgggca
tccgtagaggagcgtatcacccaggtggccaagcgaaaaatgatgctgacacaccttgtg
gtgcgaccaggcctgggctccaaaacgggctctatgtccaaacaggaactggatgatatc
ctgaagtttggaacagaggagctttttaaagatgatgttgaggctgcaaggactatggga
gataataaagacggagaggagggcagtgtgatccactatgataatgatgccatctctaaa
ctgctggaccgcagtcaggatgccacagaagacacagagatccagaacatgaatgagtac
ctcagctcctttaaagtggctcagtatgtagtaagagaggaagacgaagaggaggaggtc
cagagagagattattaagcaagaagagaatgttgatccagactactgggagaagctcttg
aggcaccattacgagcagcagcaggaagatttggctagaaacctgggcaaaggaaaacgc
atccgcaaacaggtcaactacaatgacgcctcccaggaggaccaagagtggcaggatgat
ctctcagacaaccagtctgaatattcagttgggtctgaggatgaggatgaagattttgag
gagcgtcctgaaggaggacgcagacattctcgcagacagttaaagagcgatcgagacaaa
ccgttgccaccgctgctggcgagagttggaggaaatatagaagtgctgggatttaacgcc
cggcaaaggaaagccttcctaaacgccatcatgcgctgggggatgcccccacaagatgcc
ttcaactctcactggctcgtccgtgacctgagagggaaaagtgagaaggaattcagggct
tatgtgtctctgttcatgaggcacctgtgtgagcctggggcagatggagctgagacgttc
gctgatggggtcccaagagaggggctgtcccgccaacatgttctcacccggatcggtgtc
atgtctttagtccgcaagaaggttcaggagtttgagcatgtgaatgggaagttcagcaca
ccagatttaattcctgttggattagagtttaaaaaactcaacgaaagcatctcatcggac
cccaacacacccgtcccggcaagtccggttccaactcaacccagcactcctgtctcctca
gacaagactgagttagtatccggttctcaagaagacaaggagattacagaaccagagagc
gccaaatcatcagaccctgagccaactatgccagaaccctcccctgcgccagagaagatc
aatgagagtgaagagacgaaaagcagcaacgtaggggagaaacgacaggaagagagtgtg
aaaagtgacaccccacctgtcaattcagagccatcgtccaatcaaacacagctgtccact
aaatctagtgagcagtcagccaatcagacagctttagactctggtaaagggaaagaaact
tctcatgagagaggtgaaaataaacacagtccagcaaaatccgaagaaaaggagccaaaa
agagctaatccagatgacgtgaaatccgaagaaccttctgagaaccagctgaacggagag
aaagacgtgagggacgacacagacgagagccacaaagatgacaaaaacagcgtcaagaca
cgcttcatgttcaacatcgcagatggaggattcacagagttacacacactgtggcagaac
gaggaacgcgcagctgtgtcgtctggcaaaatttatgacatctggcaccgtcgccatgac
tactggctgctggctggcatcgtaacacacggctatgcccgatggcaggacattcagaat
gacccacggtatgccatcctcaacgagccttttaagactgaaataaacaaaggaaactac
ttggagatgaagaacaaatttctggcaaggcgatttaagctcttggaacaagctttggta
attgaggaacagctacgacgtgcagcctacctgaacatgactcaggaccccagtcacccc
gccatggccctcaacacacgcttcgctgaggtagaatgtctggctgagtcccatcaacac
ctctcaaaagagtcactagctggaaacaagccagccaacgccgtgctgcacaaagttctg
aaccagctggaggagctgttaagcgatatgaaggccgacgtgacgcggttgccctccatg
ctctctcgggtgccgcctgtgtccgcccggctgcagatgtccgagcgcggtatactcagc
aggctcaccagccggggaaacgagccgccacctcagcagccgttccctcagggctcgttt
ggatgttctcagatgtataatagcagttttgccggagggttccgaggacctggaggcacc
gcgatggtgaactacagccagatgcccctggggccatacgtcagtgtctcctccaatgga
ccctcggtcccaacaagccacctggagaagaggtctagtgatgttctgagagatgtgccc
acccctgacctaaaatcagtgaaacccagtgatgtcatatgcattgaggactaa
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