Triplophysa dalaica: 130410010
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Entry
130410010 CDS
T09616
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130410010 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130410010 (usp38)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130410010 (usp38)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130410010 (usp38)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130410010 (usp38)
BRITE hierarchy
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130410010
NCBI-ProteinID:
XP_056590310
EnsemblRapid:
ENSTDLG00000012390
LinkDB
All DBs
Position
2:complement(12822050..12834056)
Genome browser
AA seq
1006 aa
AA seq
DB search
MDKILEALVSSSHPVSVKRAIVKKVMEAAEKEVTEEQCQALYQLTARLILVGEDAFQRQV
GLQVQEAYARYHRDEFASFFSKEYVIGLLQQGYGSLDHREPAILDYLHSSLRLLISCPAV
LELAPLLQTEVLRIICGRPEPATCAKLAIILTDFPQCIPREKSGVLFCQQLVRTFAYFHC
SASAERELREYVTQVTRVSTLLQGIWKAETATLLPSLQEVFAIISSTDPSFEPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDASMTQALCRMIDWLSWPLAHHVDTWVIALLKGLAAV
QKFTILIDVTLLKIEQVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHVVTLVQ
SLKNDGLPNSKTFLLQFAELIHCMMYQYSGFPDLYDSILESIKDLPKPNEEKIKFVLSQS
AWTSQSNSFASGLLKLTGKSETGKTGLVNMGNTCYMNSIIQILFMATDFRRHVLSLHLNG
SNTLMKKLQLLFAFLAHTQRAAYSPRNFLDASRPPWFTAGSQQDCSEYLRFLLDRLHEEE
KTLSDLQVISPQPEPASPSAETVPSAAGQPVADVPSSSDPMVVKEDRRTFVERMFGGRLS
TVIRCLKCQSLSEKEEPFTDLSLAFCPSMSQPQGPTDEYKSSSNVGPCQGAVNGGSESSE
SSVKEAGTRTDRPVVEPTLSVPDLVDYFLAPEILENDNCYFCEHCGSLQRAEKVMRVVSA
PEYLILTLLRFSYDATCHVRRKIMDNVGIPMHICLPLCQHASSASSDAALPSESPDSGEN
LAKKLKPSQKEEGVTDSRANSESTESSLEMLPVPYVLSSVVMHSGMSSESGHYYSYGRNV
SSTDGYVAHPCPNNLEGSSLSQEEMGCADHKPIDWFLFNDSRVTFTNFQSLQNVTSRFPK
DTAYVLIYRKQEINGLESNGGALVNGLRLNGEPPLQKDLMDAITKDNKLFLQEQELNARA
RALQATSACSFRPNGSDDNEPPGSCGPSGGGGGGGGGFNTISRLVF
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggaggcactcgtcagctcctcccaccccgtgtcggttaaacgtgct
atagtgaagaaggtaatggaggctgcagaaaaagaggtgacagaggagcaatgccaggcc
ttgtaccagctcactgcccgtcttattcttgtgggcgaggatgcttttcagcgacaggtc
ggtctccaagtgcaggaggcctatgcacgctaccaccgtgatgaatttgcaagcttcttc
agcaaggagtatgtgattggtctccttcagcaaggttacggctctttggaccacagagag
ccggccatcctggactatcttcacagctccctacggctgctcatcagttgcccggccgtg
ttagagttggcacctctgctacagacagaggtcctgcggatcatctgtggacggccagag
ccagcaacctgtgccaagctggccatcatactgacggacttcccacagtgcattccacga
gaaaagtcaggagttctcttctgtcagcagcttgtacgcacctttgcgtatttccactgt
tctgcctctgcagagcgggagttgcgggagtatgtgacccaggtgaccagggtgagcaca
ctgcttcagggcatctggaaggcagagaccgccacactgctgccctcgcttcaagaggtg
tttgcaatcatctcctctacagacccttcatttgaaccctctattgccctggcaagcctg
gtccaacacatccctctgcaaatgattacagtcctcatcaaaagcctgactactgaccag
aatgtcaaagatgccagtatgacacaagcactctgcagaatgattgactggttgtcctgg
cctttggcccatcatgtggacacctgggtcattgctttattgaagggacttgcggctgtt
caaaagtttaccattctcatagatgtcacactgcttaaaattgaacaggtctttaatcgt
ctctggtaccccattgtgagacagggagcactggtggttctgtcacacatgctgcttagt
ttccagcactctcctgaagccttccacttagtagtaccccatgtagtaacgttggtgcaa
tctttgaagaatgatggccttccaaacagcaaaaccttcctgctgcagttcgcagaactc
atccactgcatgatgtaccaatattctggcttcccagacctatatgacagcattcttgaa
tccattaaagacctgcctaaacctaatgaagagaagattaaatttgttctgagccaaagc
gcctggacctcacagtccaactcatttgcctcaggcttgctcaagctcacaggcaaatca
gaaacggggaagacgggacttgtgaatatgggcaacacatgctacatgaacagcatcatc
cagattttattcatggctacagatttcagacgacatgttttgtcactgcatctgaatggc
tccaacacccttatgaagaaactccagcttctttttgctttcttagcccacacacagaga
gcagcatattcaccaaggaattttttggatgcatctcgaccgccctggtttacagctgga
tcccagcaagactgctcagagtatttacgttttctgttggacaggttgcatgaggaggag
aagaccctctctgaccttcaggtaatcagtccacagcctgaacctgcttccccatctgct
gaaaccgttcccagtgctgcaggtcagccggttgctgacgtgccatcaagctctgatccc
atggttgtcaaagaagatagacgcacttttgtggagcgcatgtttggaggaagactgtca
acagtcatccgatgcctgaagtgccaaagtctgtcagaaaaagaggagccgtttacagat
ctctcccttgccttctgcccctccatgtcccagccacagggacccactgatgagtacaaa
agctcctccaacgttgggccttgccaaggggcagtgaacgggggcagtgaaagctctgag
agttctgtaaaagaagcaggaaccaggacggataggcctgtggtggagcccactttgtct
gtgccagatttagtagactatttccttgcaccagaaatcctagaaaatgacaactgctac
ttttgcgaacactgcggctcactccagagggccgagaaggtcatgcgggtggtgtcagcg
cccgagtacctcattctgactctgctacggttttcttatgacgccacgtgccatgtacgt
cgcaagattatggacaacgttggcatcccgatgcacatttgcttgcctctgtgccaacat
gccagctctgcttcctcagatgcagctttaccatccgagtcacctgacagtggtgagaat
ctagctaagaaactcaagccttctcagaaagaagagggtgtgacggacagcagggcgaat
agcgagagtaccgaaagcagtttggaaatgcttccggtgccgtatgttttaagttcagtt
gtaatgcattctggtatgtcttctgagagcggtcactactactcatatggaaggaatgtg
agtagtaccgatgggtatgtagctcacccatgtcctaacaatctggaaggttccagccta
tcacaagaagaaatggggtgtgccgaccacaagccaatcgactggttcttgtttaatgac
agccgagtgacttttacaaactttcagtcattgcagaatgtcacaagtcgctttcctaaa
gacacagcctatgttctgatctatagaaaacaagaaattaacggactagaaagcaatgga
ggggcattagttaatggtttgagactgaatggagagccacccctacagaaagatctgatg
gatgctattaccaaagacaataaactcttcttacaggagcaggagctgaatgccagagcc
cgggctctccaagccacttcggcctgctcatttcggcccaatggttctgatgacaatgag
ccccctggcagctgtggaccctcaggtggaggtggaggtggaggtggaggcttcaatacc
atcagcagactcgtcttctaa
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integrated database retrieval system
