Triplophysa dalaica: 130410192
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Entry
130410192 CDS
T09616
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130410192 (ddx49)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130410192 (ddx49)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
90S particles
Helicases
130410192 (ddx49)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
130410192
NCBI-ProteinID:
XP_056590710
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Position
21:14109392..14112522
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AA seq
459 aa
AA seq
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MATFESVGLCGWLIHQCKEMGINRPTPVQEKCIPAILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSDDPYGVFCLVLTPTRELAYQIAEQFRALGKPLGLKDCIIVGGMDMVTQGLELSRK
PHVVVATPGRLADHIRSSDNINLKKIQFLILDEADRLLEQGCTDFTKDLEVILSVVPAKR
QTLLFSATLTDTLQQLQSIAMNKPFFWEQTSEMRTVEELDQRYILTPEKVKDAYLVHLIQ
TFQDEHADWSVIIFTNTCKNCQILAMMLREFNFPTITLHSMMKQRQRFANLAKFKSNVFK
ILVATDVAARGLDIPTVQVVINHNTPGLPKTYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEELIQAKLKEFPVVEKEVLKILTQVNVTRRQCEIKLESTDFDEKKNTNKRKQMILEG
KDPDLEEKRKHELDKIKRKEKFKGKIQEKHQKKKQQQET
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtttgagtctgtcggcctgtgtggttggttgatccatcagtgtaaggagatg
ggcatcaatcgtccaacgccagtacaggagaaatgcatcccagccatactggaaggtcgg
gactgcatgggctgtgcaaaaactggaagtgggaaaacggcagcttttgtcctcccagtg
ctgcaaaagttgtctgacgacccttatggtgttttctgcttggtcttaacccccactaga
gagcttgcttaccagatagcagaacagttccgagcattaggaaagccactgggcttgaag
gactgtatcattgtgggtggaatggacatggtcacccagggtttagagctgtcgagaaag
cctcatgttgttgttgcaacaccaggacgacttgctgatcacatcagaagctctgacaac
atcaacttgaagaaaatccagtttctaatcctggatgaagctgaccgtcttttggagcag
ggctgcacagatttcactaaagacctagaggtcattctcagtgttgtgcccgcaaaacgc
cagacactgctgttcagtgccacacttacagacacactgcagcagcttcagagcatcgcc
atgaacaaacctttcttctgggagcaaacatctgagatgcgaactgtagaagagttggat
cagagatacatcctcactcctgagaaggtcaaggatgcttacctggtccatctcatccag
acgttccaggatgaacatgctgattggtctgtcataatattcacaaacacttgcaagaac
tgtcagatactcgcaatgatgctgcgtgaattcaatttcccaaccatcactctgcactca
atgatgaagcagagacaacgttttgccaacctggcaaagttcaagtcaaacgtcttcaaa
attctcgtagcaacagatgttgctgccaggggtttggatattcccaccgtacaggttgtt
atcaaccataacacgccaggtttgcctaaaacttacatccacagagttggacgaactgct
cgagctggtcgaaatggtgtatccattacactagtcacacaatatgacatccaccttgtc
aatgccattgaggaactgatacaggcaaaattgaaggaatttccagttgtagaaaaagag
gtgttaaagatcctcacgcaggtcaacgtaacaagacgacaatgtgaaattaaactggag
tcaactgattttgatgagaaaaagaacaccaacaaaaggaaacagatgattctagaggga
aaagatccagatttggaagagaaaaggaaacatgaacttgacaaaatcaagcgaaaggaa
aagttcaaaggaaaaattcaagaaaagcatcagaagaaaaaacaacaacaagaaacatga
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