Triplophysa dalaica: 130410201
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Entry
130410201 CDS
T09616
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
tdw03015
mRNA surveillance pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130410201 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
130410201 (eif4a3)
03015 mRNA surveillance pathway
130410201 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130410201 (eif4a3)
03041 Spliceosome [BR:
tdw03041
]
130410201 (eif4a3)
03009 Ribosome biogenesis [BR:
tdw03009
]
130410201 (eif4a3)
03012 Translation factors [BR:
tdw03012
]
130410201 (eif4a3)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130410201 (eif4a3)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130410201 (eif4a3)
mRNA cycle factors
Stress granule specific factors
130410201 (eif4a3)
Spliceosome [BR:
tdw03041
]
Complex C
Other components
EJC/TREX
130410201 (eif4a3)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
90S particles
Helicases
130410201 (eif4a3)
Translation factors [BR:
tdw03012
]
Eukaryotic type
Initiation factors
eIF-4
130410201 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
130410201
NCBI-ProteinID:
XP_056590723
LinkDB
All DBs
Position
21:574629..578077
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAPVPVRKRIMKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATYCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcccccgttcccgtgaggaaaaggatcatgaaggaggaagacatgaccaag
atcgagtttgaaacgagtgaagaagtcgatgtgacgccgacgtttgacacgatgggcctg
agggaagatttactgcgcgggatctacgcatacggttttgagaaaccatcagccattcag
cagcgagccattaaacagatcataaagggaagagacgtcattgcccagtcacagtccggt
actggtaaaacagccacatactgtatatcagtcctgcagtgtttggacatccaggttcga
gagactcaggctctgattttggctccaactcgagagttagcaggacagattcagaaggtg
ctgctggcgttgggtgactacatgaacgttcagtgtcactcgtgtatcggaggcacaaat
gtgggggaagacatcaggaagctggactacggtcagcatgtggtggccgggactccggga
agagtgtttgacatgatccgcaggaggagtctgagaacacgagccattaagatgctggtc
ctggatgaggcagatgaaatgctcaacaaaggttttaaggagcagatttatgacgtgtac
aggtatcttcctccggccactcaggtgtgtttgatcagtgccacgctgccccatgagatt
ctggaaatgaccaacaagttcatgacagaccccatccgcatcctggtcaaacgtgatgag
ttgactctggaggggatcaagcagtttttcgtggctgttgagcgagaggagtggaagttt
gacaccttgtgtgacctgtacgacacgctgaccatcacgcaagccgtcatcttctgtaac
accaagcgcaaggtggactggctgacagagaagatgagagaagcaaacttcaccgtgtca
tctatgcatggagacatgccacagaaagagagagagtctatcatgaaggagttcagatct
ggagccagtcgagtgttgatctccacagatgtttgggccagaggtctagatgttcctcag
gtttctctcatcatcaactatgatctgccgaacaacagagagctttacattcacaggatt
ggtcgatcgggtcgttacggcaggaagggtgtggccatcaactttgtgaagaatgatgac
attcgtatcctgcgtgatatcgagcagtactactccactcagatcgatgaaatgcccatg
aacgttgctgatctgatctga
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