Triplophysa dalaica: 130410202
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Entry
130410202 CDS
T09616
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130410202 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130410202 (nfasca)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
L1 family
130410202 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
V-set_CD47
Ig_6
DUF3792
Syndecan
Motif
Other DBs
NCBI-GeneID:
130410202
NCBI-ProteinID:
XP_056590725
LinkDB
All DBs
Position
21:complement(8609374..8673780)
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AA seq
1371 aa
AA seq
DB search
MWTQGQWAALAVLSIILLLSKEADPIEVPLDPKIQQELKQPPTIVKQSLKNYIVAPGDSI
IIECEAKGNPVPTFQWRRNGKFFNVGKDPWVTMRTRSGTLEIIKSGKPEDYEGEYQCFAS
NDYGTAISNKILLRVSKSPLWPKEVLDPVVVREGASLVLPCNPPPGLPPPLTFWTDSSMM
PLEKSTRVSMGLNGDLFFSNVLAIDATTDYSCNARFGFTIQQKNPYNLRVQTNEPYNDTL
VNSTDVYGARNVAETQPKLLSPKGLSSSKMVLRGEELLLECIAAGVPTPTINWFKRGGDL
PKQKVKFGNYNKTLHILNVSEEDSGSYTCMASNKMGSLRHSVDVQVKAAPFWLDKPTNLV
LAPDENGRLVCRANGNPKPTIQWQMNGGPIDGLPNQQVEGDTIMFHSVQIGGSAVYQCNA
SNEHGYLLANAFVNILDMVPRMLGPKNQLIKVIENNRTFLDCPYFGSPFPVLRWFKNGHG
SGLDGGQYKVYHNGTLEITHARPEDQGTYTCVAGNILGKSENKVMLEVKEPTRIVRAPEH
VTGPSGSTARFDCRVKHDPSLPITITWLKDDKPLSFGWLGRLKKNDESMTIHNINPEDSG
TYTCTSKTEIDEDSASARLTVTMDDNSSASNRSASAGRPDPPQDLELSDPLARSVRLTWV
PGNENNSPVTHFLVQFEEDRWEPGKWQNLSLHDGNLNSVNLQLSPFVNYQFRVIATNAVG
QSQPSLPSSRYQTSGAPPDVVPSGLKGWGSKKNNMEITWQPLLNTERNGPNMRYVLWWRM
ENTDEEWKNISTTKTKHTIHNIDTYVPYEIKIQAANDFGLSPASNVVIGYSGEDKPSAAP
TNLRVSKINSTKVNVHWVPVDPSNVNGEFKEYKLYYWREASLIKGLKVNRTKLHKGFYTT
AEHPSGILTELYPYSKYKTYMVVANREFEGPQSNHVEFETKEGEPGAPKYFKIQKHTDVV
HLKWDKPLEPNGVLIGYTLQYHTVNGTQEGERMVQSFPPNVTEYIMNLPHRFTRYKFYLA
ARTQVGAGEVYVMESPLFTNEGTPDTDSTVVAVNFTDALMFETPPPPLSTVPVPEILTPE
PATPAPTTAAPPKPTTTTTTTTTTTTTTAASTTVASVRPVSPKTVDWKLLAPNVKIWNVT
VEVNSDHANVSWKHNFSVDSSVFVIEYTPENKSQTHLPRAEGNAIMKSFQVNRGPPIKLS
GLLDGVKYRLRVYSHEHHSISSDYVTFETAYKESEDIATQGWFIGLMCAVALLVLILLIV
CFIKRSRGGKYKVSEKKDLPLDAVEHKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDD
SLVDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgcaggggcagtgggcggcactggcagtgttgtcaataatcttgcttctgtca
aaggaggcggatccaattgaagtcccactagacccaaagatccaacaagagttgaaacaa
ccccccaccattgtgaagcaatcactaaagaattacattgtggcccccggagatagcatc
atcattgaatgcgaggccaaggggaacccggtgccaacgtttcagtggaggcgaaatggc
aagttcttcaacgtggggaaggacccgtgggttaccatgcggacacggtcgggaacgctg
gagatcataaaaagcgggaaaccggaagattacgagggagagtaccagtgtttcgcttcc
aacgactatggcacggcaatttccaacaaaatcctgctacgagtctcaaagtctcctctg
tggccaaaggaagttctggacccagtggttgtgcgtgaaggggcatcgctcgtcctcccc
tgcaacccacctcctggactcccccctcctttaaccttctggacggacagttccatgatg
cctttagaaaagagcacgcgagtatcaatgggcttgaatggtgacctgttcttctccaat
gttctggctatagatgccaccacagattacagctgtaacgctcgcttcggtttcaccatt
caacagaagaacccgtacaacctcagagtccaaaccaatgagccttataatgacacctta
gtcaactccactgatgtgtacggtgcacgtaatgtggcagaaacgcaacccaaacttctg
tctccaaagggcttgtccagctccaaaatggtgctgcggggggaagagcttctgctagag
tgtatagctgctggagtcccaactcctaccatcaactggttcaaaagagggggagatctt
cccaaacaaaaggtcaaatttggtaactataataaaacgttacatatcctcaacgtgtct
gaggaagactccggaagctacacctgcatggccagcaacaagatgggcagccttcgacat
tctgttgacgtacaggtcaaagccgctccattttggctggataagcccaccaatcttgtg
cttgcccctgatgagaatggacgattggtttgtcgtgcaaatggaaacccaaagcccact
atccaatggcaaatgaatgggggaccgatagatggactgccaaaccagcaagtggagggt
gataccatcatgttccattcggtgcagatcggtggcagtgcggtgtaccaatgcaatgca
tctaatgagcatggatacctactggccaacgccttcgtcaacatcttggacatggttccg
cggatgctaggcccgaagaaccaacttatcaaagtgatcgagaacaacaggactttcctt
gactgcccttactttggctccccgttccctgtgctgcgctggttcaagaatggccatggc
agcggtctcgatggtggacagtataaggtgtatcacaatggtacattggagatcacacat
gcgcgacctgaagatcagggcacgtacacctgcgtcgccggtaacattctgggcaagagt
gagaataaggtgatgctggaggtcaaagagcccacaagaatagttcgggccccagagcat
gtgacaggacccagtggaagcacagctcgctttgactgtcgagttaaacacgatccgtca
cttcccattaccatcacatggctaaaagatgacaagcctttgagcttcggctggctgggc
cggttaaaaaagaatgatgaatccatgaccattcacaatatcaatccagaggattcaggg
acgtacacatgcacttccaaaactgagatagatgaagactctgcctctgctcgccttact
gttacaatggatgacaactcgtctgcctcaaatcgtagtgcctctgcaggtcgacccgac
ccccctcaggatcttgaactgtctgatcctctagctcgcagtgtcagactcacctgggtg
cctggaaatgaaaacaacagccctgttacacatttcctcgtccagtttgaagaggacaga
tgggagccggggaagtggcagaacctgtcattacacgatggcaacctgaactcagttaac
ctgcagctgtcaccctttgtcaactaccagttcagagtcatagccaccaatgcagtgggt
cagagtcaacccagcctcccctcttcacgctatcagaccagcggcgctcctcctgatgtg
gttccaagtggtcttaaaggatggggaagcaagaagaacaacatggagatcacttggcag
cccctgctgaacacagagagaaacggtccgaacatgcgatatgttctctggtggagaatg
gaaaacacagatgaagaatggaagaacattagcaccactaaaacaaagcacactatccat
aatatagacacctacgttccttatgaaatcaaaatacaagccgccaatgacttcgggctt
agtccggcgtctaatgttgtcattggttattctggcgaagacaaaccatcagctgcacct
acaaacctcagggtgtcaaagatcaacagcaccaaagtaaatgttcactgggtccccgtg
gaccccagcaatgtgaacggagagtttaaggaatacaaattgtactactggagggaggcc
agtctgattaagggcctgaaagtgaacaggacaaagctgcacaaaggtttctacacaacg
gccgaacatccctctggcatcctcactgaactctatccttacagcaaatacaagacctac
atggtcgtggctaaccgagagtttgagggtccacagagcaaccatgtggagtttgaaaca
aaagagggagagccgggcgccccaaagtatttcaagattcagaagcacacagatgtggtc
cacctgaagtgggataagcccctggagccaaatggggttctgattggatacacgcttcag
tatcacacagtaaatgggacacaagagggagagaggatggtccagagtttcccccccaac
gtgacggagtacatcatgaacctgcctcaccgtttcacaagatacaagttctacctagcg
gctcgtacacaggtgggcgctggagaggtctatgtcatggagtcgccacttttcacaaat
gaaggcaccccagatactgactcaacagttgtagcggttaactttacagatgccttgatg
ttcgaaacccctccccctcccctatccactgtcccagtccccgaaatacttaccccagaa
ccagccacacctgcccctacaactgctgctccacctaaacctacaacaaccactaccact
accacaacaaccacaactacaactgcagcttcgactacagttgcttcagttcggccggtt
tctcccaaaactgtggactggaaacttctggccccgaatgtaaagatctggaatgtgacc
gtggaggttaacagtgaccatgctaatgtcagctggaagcacaacttctccgttgacagc
agcgtgtttgtgatagagtacacgccggagaataagagccagacgcatctaccgagagct
gaaggtaatgctataatgaaaagctttcaagtaaaccgcgggcctcccattaagctgtcc
gggctgttggacggggtcaagtatcggttgcgggtgtattcccacgagcaccactccatc
agcagtgactatgtcacgttcgagacagcctacaaggagtctgaagacatcgctactcag
ggctggtttattgggctcatgtgtgccgtcgctctgttggttctcatcttgctcatcgtc
tgtttcatcaagaggagtcgtggaggaaaatacaaagtgagcgaaaagaaagacctcccg
ttagatgctgttgaacataaagaccaagatggatcatttgactatcacagtgacgaggac
aacaagcctctgcagggcagccagacctctctggatgggaacgtgaaggagagcgatgac
agtctggtagattatggtgaaggaggggacggtcagttcaatgaggacggctccttcatt
ggccaatacacagttaagaaggacaaagaggaaacggagggaaacgaaagctcagaggcc
acgtcacccgttaatgccatctactctctggcatag
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