Triplophysa dalaica: 130410446
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Entry
130410446 CDS
T09616
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130410446 (rbm39a)
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
General mRNP proteins
130410446 (rbm39a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RSRP
RRM_occluded
RRM_5
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
130410446
NCBI-ProteinID:
XP_056591097
LinkDB
All DBs
Position
21:complement(8419263..8425335)
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AA seq
523 aa
AA seq
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MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSKSRERKRSKSRDRKKS
HDRRRSRSKERKRSRSKERRRSRSKERGGRYRAPFSGQKFNGGPRGKTGPPPAIKLSRKR
SRSRSPFKKDKSPVRLPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRI
ISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNLQK
GNSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAECA
KKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHCFQ
LSNMFNPNSENEHGWEIEIQDDVIEECNKHGGVIHIYVDKKSTEGNVYVKCPSIPAAMAA
VSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacttggacatcgaagcaatgttagaggctccttataaaaaggatgacaac
aagtccttaagtaccaatggccacgaggagcggagtaagaagaaaaagaagagcaagagt
cgcagcagaagcaagagtcgggagaggaaaagaagcaagagtcgcgaccgcaagaagagc
catgatcgcagacggagccgcagtaaggaacgcaaacgcagccgcagcaaggagaggcgc
cgttccaggagcaaggagcgtggtggtcgttacagagctccattttctggacaaaaattt
aatggtggtccaagggggaagactggcccaccacctgccatcaaactaagccgtaaaagg
tccaggagccgcagtcctttcaaaaaagacaaaagccctgtgagactgcccattgataat
ctcacacccgaggagagagatgcgcgaacagtgttctgcatgcagctggcagccagaatc
cgaccacgagacctggaggaattcttttctgctgtgggaaaagtgagagatgtacgaatc
atctctgatagaaactccagaagatccaagggtattgcttacattgagtttgtggattcc
acctcagtacctttggcaattggcctgtctgggcaaagacttcttggagtgccaatcatt
gtccaggcttcacaggctgaaaagaacagagcagctgcattggccaacaacttgcagaaa
ggaaattctggacctatgaggctgtatgtcggctcattgcattttaacattacagaggac
atgcttagaggcatctttgaaccattcggaaggattgatagtattcaactcatgatggac
agtgaaactggaagatccaaaggatatggctttatcacttttgctgatgctgaatgtgct
aagaaagctctggaacagcttaatggctttgagctggctggcaggccaatgaaagtagga
catgtgacagagcgcaccgatgcttcaactgccagctccttcttggacaatgatgagctg
gagaggaccggaattgatctgggaactaccggaagacttcaactcatggccagactggct
gagggtactggtcttcaaattccacctgctgcacagcaggctcttcagatgagtggctcc
atggtagccatggctgcagctactgctgctatgaaccctggattgagttttaacattaat
gtgcccacaaaccaagctttgaatctgccatctcaaccaattgctacacactgcttccag
ctctccaacatgttcaatccaaattcagaaaatgaacatggttgggaaattgaaattcag
gatgatgtaattgaagagtgtaacaaacatggtggagtcatacatatatacgtggacaag
aaatctactgagggtaacgtctatgtgaagtgtcccagcattcctgctgccatggctgca
gttagtgctttgcatggacggtggtttggcggtaaaatgatcacagccgcttatgtccct
ctccctacataccacaatcttttcccagagtcagtgcaagccacacagcttctcatgcct
agtcgccggtga
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