Triplophysa dalaica: 130410479
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Entry
130410479 CDS
T09616
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130410479 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130410479 (taf4a)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130410479 (taf4a)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130410479 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
130410479 (taf4a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130410479 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
130410479
NCBI-ProteinID:
XP_056591148
LinkDB
All DBs
Position
21:9771398..9785373
Genome browser
AA seq
815 aa
AA seq
DB search
MVTILPSHGAKIGTSAVQTLNGGNAMDPHTGSGTPVSGGQSTSSSSSDDASASVPVVNNG
PGVSKGHVNVTVAPSPNTVIQSSYGSPQCAGPSVVRPSMQTAGTGLTINGSNNNAVSVTV
ANVATQPAPGITTTAIPLSMNQTPASVSAIPVKSESPKTVSPAGMTLGPQIQSPVVATGA
VLQGVARTAAPATIASSPAIRTIAPQVLAPRLHQSSPGQGIQNIQLPPGMVLVRSDSGQL
LMIPQQMLAQMQAQSQANRPAAPTSTTPGPITSAQVPGTPLMARQVTPTAIIRQGSPTAS
STATTTLQRPPVQQASSVGTVLSVQAGTAQRTVTAATGTTVTPTTETMENVKKCRNFLST
LIKLATSGKQSTETVANVKQLVKNLLEGTIEAEEFTSRLYKELNSSPQPYLVPFLKRSLP
ALRQLTPDSTAFIQQSQTLQSPTVVLTSPSTAATTAPRTLIQTGLSNSSHTASLVLQPSQ
QGTIVKPPQVTLTTTPMVTLRGQPQSHIVMGQPQVQLKQIQTVAAKQGVVSSTKLTHGSV
SVALVQRMKAKDAAGGTFRDDDDINDVASMAGVNLSEENARILATNSELVGAVTRSCKDE
AFLSASMLQHKILQIGKRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKNMTYKE
DSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKE
MQQQELAQIRQREANMTALAAIGPRKKRKLDSPSLGTDAEGSGLSGSASGGLNAGASRQY
TRQRITRVNLRDLLFCLENERSTNHSHLLYQALLK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggtaactattttgcccagccacggcgcgaagatcgggacgtccgcagtgcaaactttg
aacggaggcaatgcgatggatccgcacactggaagcggcactccagtgtccggtggccag
tcgacatcatcatcatcatcagacgacgcttcggcttctgtcccggttgtcaataatgga
cccggggtgtcgaaaggacatgtaaacgtgactgtcgccccaagcccaaacacagtgatc
cagtcttcttacgggagtccacagtgtgctggaccctcagttgtcaggccatctatgcaa
actgctggaacagggttaactattaacggaagtaacaataacgccgtttcggtgactgta
gccaatgtagccacccagccagcaccgggaataactactaccgccatccctctttcgatg
aaccagacacccgcctctgtgtctgctattcctgtcaagtccgagtcccctaaaactgtc
agccctgccggcatgaccctcggaccccagattcagagccccgtggtggccacgggagct
gttttgcagggagttgcgagaacagcagctccagcgactattgcatccagtcctgccatc
aggactattgcgccacaggtgttagcgccccgtctacaccagagcagtccgggccagggc
atccagaacatccagctacctccaggtatggtgttggtgcgtagtgacagcggtcagttg
ttgatgattcctcagcagatgttggcacagatgcaggcccagtctcaggccaaccggcct
gctgcccccaccagcaccacccctgggccaatcacctctgcgcaggtacctggaacccca
ctaatggcccgacaggtgacccctaccgccattataaggcagggatccccgacagccagc
agcacggccaccaccacactccagagaccacctgtacagcaggcatcctctgttggcacg
gtgctgtcagtgcaggcgggaaccgcccagaggactgtgactgctgccacggggaccacc
gtcaccccgacaacggagacgatggagaatgtaaagaaatgtaggaactttctgtccacg
ttgataaagctggccaccagcggtaagcagtcaacagagactgtcgccaacgtcaaacag
ctggtcaagaacctgctggaagggacaattgaagccgaggagttcaccagcagactctac
aaagagctcaactcctcgccacagccttacctagtgcctttccttaagaggagtcttcca
gctctgcgacagctcactccagactcaacagccttcattcagcagagccaaacccttcag
tcacccactgtggtgctgaccagccccagcaccgctgctaccacagccccccgcacgctt
atccagactggcctcagcaactccagccacaccgcctctctggtgttgcagccctcgcag
caggggacaatagtgaagccccctcaggttaccctgacaaccactcccatggtaacgctc
aggggtcaacctcaaagccacatagtgatgggtcagcctcaggtgcagcttaaacagatc
cagacagtggcagcaaagcagggtgtggtgagcagcactaaactgactcatggttccgta
tctgtagctttagtgcagaggatgaaagcgaaggatgctgcaggaggaactttcagggat
gatgatgacatcaacgatgtggcctcaatggcaggtgttaatctttctgaagaaaacgca
cgaatcctggccaccaactcagaactggttggcgcagtcacacggtcatgtaaggacgaa
gcttttctctcggccagtatgctacagcacaagatactacagataggcaagaggtttggg
gtgactgagctgggacccgaagtggtgaacatagtctctcatgcaactcaacagagactg
caaaaccttctagagaaagtctcattgatcgcacaacaaaagaacatgacttacaaggag
gacagtcggtacgagcaggtggaggacgttcgctctcagctgaagttctttgagcagctc
gaccagttggagaagcagaagaaagaggaacaggagagagaaattttaatgaaggcagct
aagtcacgctcgcgacaagaggaccccgagcagctgcggctgaaacagaaggccaaagag
atgcagcagcaggagttggcgcagattcgacagagggaggctaacatgacggcactggcg
gctatcggacccagaaagaaaaggaaactggattctccttcgctcgggactgacgcagag
ggatcgggtttgtcagggagtgcgtccgggggcttaaatgcaggagcgtcgaggcagtac
actcgccaacgcatcacgcgcgtaaacctcagggatttgctcttctgtctagagaacgag
aggagcaccaaccactcacacttgctctaccaagccctcctcaaataa
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