Triplophysa dalaica: 130410481
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Entry
130410481 CDS
T09616
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130410481 (ssrp1b)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130410481 (ssrp1b)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130410481 (ssrp1b)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130410481 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
130410481
NCBI-ProteinID:
XP_056591155
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All DBs
Position
2:9607496..9620938
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AA seq
700 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQTLVYKNSKTGKVDSIPVHELTQAQWRRVCLGH
GLKLSTSTGHIYKYDGFKDTDIEKISEYFKANYKLELTEKDMCVKGWNWGTAKFSEPLLS
FEVNDSPAFEIPLSSVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPTPGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMNEEEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGIKGNDNMYSDSDDDQHDAYLERMKEEGKIREEANGSDISEGESDES
FNPGEEDDDIAEEYDSKASASESSGDEGDSDRDRKKKPAKKAKLVKERKPRKKVKKVKDI
NAPKRPMSAYMLWLNSSRDRIKSENPGISVTEISKKAGEMWKQLSKEKKEEWDGKAEEAK
KEYERKMREYRESGGGSSGTSKRERKRKGKNEEKRKKSGGGREKEKERTTGNDSFKSREF
ISSEESSSESERGKRRKRKKSVDEEDVASTPPSSEESGSD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacactctggaattcaatgagatttatcaggaggtcaaaggctcctggaatgat
gggcgcctgcgcttcagtaagcagactctggtgtataaaaacagtaagaccgggaaggtg
gacagcattcctgtccatgaactcacccaagcccagtggaggagagtttgtctgggtcat
ggccttaaactgtcaaccagcactggtcatatctacaaatatgatggctttaaagataca
gacattgaaaagatctcagagtacttcaaagccaactacaaactggagctgacagagaaa
gatatgtgcgtgaagggttggaactggggcactgcgaagtttagtgaaccattgctttca
ttcgaggtaaatgacagccctgcatttgagatcccactttccagtgtatcccagtgtgca
acgggaaagaatgaggtcacattggagtttcatcaaaatgatgacacagaggtgtccctc
atggaggtgcgcttctatgtcccgcccacccctggagacgagggttccgatccagttgag
gcatttgctcagaacgttttgtcaaaggcagatgtgatccaggctacaggagatgccgtg
tgtatcttcagagagctgcagtgtctcacaccaaggggcaggtatgatatccgcatttat
ccaacatttctccatctgcacggtaaaacgtttgactacaagatcccatacactacagtg
ctccgcctcttccttttacctcataaagaccagcggcagatgttctttgtgatcagtctg
gacccgcccattaaacagggtcaaacccgttatcattttcttatcctcctgttctcaaag
gaagaggacatcaatctgacacttaacatgaacgaggaggaggtggagagacgctttgaa
gggaagcttaataaaaacatgtctggctctctatatgagatggttagtagagtcatgaag
gccctggtcaacaggaagatcacagtgcccggaaatttccaaggtcactcaggtgctcag
tgcataacatgttcatataaagccagttctggtctgttgtatccgctggagagaggtttc
atctacgtgcacaagcctcctgtacacctgcgctttgaagagattgcctgtgtgaacttc
gccagaggaaccaccaccacccgctctttcgactttgagatcgagaccaagcagggcaat
cagtacaccttcagcagcatcgagagagaggaatatgggaagctttttgactttgtcaat
gctaaaaagctaagcattaagaacagaggctttaaagagggtatcaaaggcaatgacaat
atgtacagtgactctgacgacgaccagcatgatgcctaccttgagcgcatgaaggaggag
ggcaagatccgtgaggaggccaacggcagtgatatctcagagggcgagagtgatgaatct
tttaatcccggtgaagaagatgacgacattgctgaagagtatgacagtaaggcctctgcc
agtgaaagcagcggtgatgaaggagacagcgatcgagaccggaagaagaaaccagccaag
aaagcaaaattagtgaaagaaagaaaaccacgcaagaaagtgaaaaaggtaaaggacata
aacgccccaaagagaccaatgagcgcctacatgctgtggctgaattccagtagagaccgc
atcaaatcggagaacccaggcatctctgtcactgaaatctctaaaaaggctggagaaatg
tggaaacaactcagcaaagagaagaaagaggagtgggatggaaaagcagaggaagcaaag
aaagagtatgagcgaaagatgagagagtacagggagagtggtggaggctcctcgggcacc
tcaaaaagggagagaaagagaaaaggaaagaatgaagaaaagaggaagaagtcaggtggc
gggagagagaaagagaaagagcgaacaacaggcaacgacagttttaagagtcgagagttc
atatccagtgaggagagctcatcagagtcagagagaggcaaaagacgcaagcgcaagaag
tctgttgatgaagaagatgtggccagcacaccaccgagctctgaagagtccggctcagac
taa
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