Triplophysa dalaica: 130410552
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Entry
130410552 CDS
T09616
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130410552 (pcdh17)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Protocadherins
130410552 (pcdh17)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
130410552
NCBI-ProteinID:
XP_056591237
EnsemblRapid:
ENSTDLG00000011988
LinkDB
All DBs
Position
21:4875501..4936758
Genome browser
AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNSKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSEQIDIDISENAAPGTRFPLAAAYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELIVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPLGMVLIDLNATDTDEGINGQVTYSFSCYVADRIKELFSIDQRTGVIKIQGKID
YEENPIVEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVSPVVELIIKVTDHGKPTLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYIKPNANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAESNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKASGLKPQ
PLEQEEDCVNCTEECRVLGHSDRCWMPQFPAAGAGGAGTPQAEGSDYRTNLFVPAGMEAV
AVETEPYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSP
SKGCNTGSPCSAKGMGDGAEGKPSTSHYGPPDGQYISPNKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMNCVLEQGGGEMGRGTMDADQVVRDIDKLLQDCRGSEHTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacattgaaaaac
ttgaactactcgatacctgaggagaaaattcagggtgtcattggaaacattgccaaggat
gcggagctggaactgggggagcaggggaagaaatccaacttcagggtgttggagaactcc
gccccgcatctcatagatgtggatcctgaaagcgggctgttatacacaaaacagcggatc
gacagggaaacactgtgtagacaaaactctaagtgccagctctcaatggaagtgtttgcc
aatgacaaagagatctgcatgattaaagttgagatacaggacataaatgacaacgcacca
agctttccttctgaacagatcgatatcgacatttctgagaacgcagccccaggtacacgt
ttccctttggctgccgcctacgatcctgacacgaaggaaaacggcctgaaaacatatcag
atcacacgggatgattacagtatattctcgttggacgtaaaatccaggggggatggaact
aaatttcctgaattgatcgttcagaggtctttagatcgagaggagcgcagccatcacact
ttaattataactgccacggacggaggggaatatcctaaatcgggcacgatgcaaatcaat
gtgaaagtcacagattctaatgataatagccctgtgtttgaacaaccctcatatgtagtg
gagatccctgagaattcacctctagggatggtattgatagatttaaatgccacagatacc
gatgaggggattaatggccaggttacttattcctttagttgttatgtcgcagacaggatc
aaagagttgttttcaatagaccagcgaacgggtgtcataaagattcagggtaaaatcgac
tatgaggagaacccaattgtagaaattgatgttcaggcgaaagatcaaggccccaaccca
attcctggccattgtaaagtcaccgttaaagtgctcgacaggaatgacaactggccctcg
ataggtttcgtggctgtgcgtcagggggcggttagcgaagcggcaaccccagggacagtg
atcgctcttgtgagagtcacagacaaggactcgggccgcaatggccagctccagtgtaga
atcttgggcaatgtcccttttaagttggaggagaactatgataacttctacacagtggta
acagacagacctctagatagagaagtaaaagatgagtataacataaccattgtggccaaa
gacaatggaaacccacccctgaattcaaccaagtcttttactgttaagatcttagatgaa
aatgataatgcgccccgcttcacaaaaatggtctatctgcttcaggtgcctgaaaacaac
atcccgggagagtacctgggctcggttctggctcatgacccagatttgggccaaaatgga
actgtgtcctattctctccttccctctaatgtgagcgaggaatctatcaccacatatgtt
aacatcaaacctactgatggtgcaatttatgctctgaggagtttcaactatgaacaaaca
aagtattttgactttaaagtccaggcgaaagattcaggtaatcctcacctggagagcaac
accaccgtccgtgtgagcgtactggatgttaatgacaacattcccgtcattgttctccca
ttacttcagaacgatactgctgagatccacgtaccacgaaatgtgggggtcggtcacatt
atcaccacggtcagagctgtggacaacgacttcggcgagagtggccgactcacctacgag
atctcggacgggaacgaggaacacctgtttgagatcgattctgtgacgggtgaggtacga
acagctcagccattgtgggaagaggtgtcacctgttgtagaactcatcatcaaggtgacc
gaccacggcaagccgactctgtcggccatggcgaagcttatcgtcaaagcctactccgga
cccctaccggagggagaaccacgcatcaatgctgagcatcacaactgggacatgtcactc
ccattaatagtcaccctcagtatcatctccatcatgctcttggcggccatgatcacgata
gcggtcaagtgcaaacgggagaacaaggagatccgcacgtacaactgccgcattgctgag
tacacccacccgcaattgggcaaaggcaagaaaaagaaaatcaacaagaacgacatcatg
ctagtgcaaagcgaagtggaggagcgagataccatgaacgtcatgaacgtggtaagcagc
ccatcgctggccacctcgcccatgtactttgactaccaaacacgtctgcccctaagctct
ccgaggtcagaggtcatgtatatcaaacccaacgccaacaacctcagcgttcctcaaggt
cacgttggctgccacaccagcttcacaggacccgttaccaataccacggagacaccagta
aacaggatgtcgataattcagacagacaattttccagctgagtccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacgttcaaagatccggagcgtgccagtctcaga
gacagcgggcatggagacagcgaccaagcggacagtgatcaggacactaataaaggctcc
tgctgtgacatgtcggctaaggaagcgctcaagatgaaggccagtggcctgaagccgcaa
ccgcttgagcaggaagaggattgtgtgaattgcacagaagaatgtcgagtgctgggtcac
tcggaccgttgctggatgccccagtttcctgcagccggggctggaggagcaggaactcca
caggccgagggctcggactaccgcaccaacctcttcgtcccggcaggcatggaagcggtg
gccgttgagactgagccctacgagacggtgtgcaatcccaacggtaaaaaaacattctgc
acgttcggcaaggaacgtcgagaccacaccatcctggtggcgaatgttaaaccctaccta
aagaccaaacgtgccctcagccctctgttgcaagaggtcccctcggcctcgtgtagtccc
agcaagggctgtaatacaggttccccctgttcagccaaaggtatgggcgacggcgcagaa
ggcaagcccagcaccagccactacggacctccagatggacagtacatctcccccaacaag
cagaacaaagagcagggctactcaactctgcctccctccgacccggtggccaaagtcttg
gctgaggcacgttcgcggatcagccaggagacagcggtggaaatgaactgtgtcttggaa
cagggaggaggagagatgggtcgtggcaccatggatgcggaccaggtggtcagagacatc
gacaaactgctgcaggattgtcggggaagtgagcacacccctatcagaaagtga
DBGET
integrated database retrieval system