Triplophysa dalaica: 130410561
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Entry
130410561 CDS
T09616
Symbol
efl1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130410561 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130410561 (efl1)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
GTPases
130410561 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
DUF1825
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130410561
NCBI-ProteinID:
XP_056591298
LinkDB
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Position
1:32661232..32744222
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AA seq
1124 aa
AA seq
DB search
MGHTSLEKIIALQKKTSSIRNMCILAHVDHGKTTLADCLVATNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAITLHYTTGENEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAFIHLQKILEQVNAVTGSL
FTSKVLEERAEKDAGAQSITTENSAGDQVYDWSAGLEETDDSDLYFSPDRGNVVFASAMD
GWGFRIHQFAEMYSQKMGIRSWVLLKTLWGDFYLNTKSKRIMKGAQSKGKKPLFVQLVLD
NIWSLYDAVVTRRDKEKVEKMVTSLGLKVMPRDLRHSDPKVLLCAICSQWLPVSQAVLSM
VCEKLPSPAEMSSERAEKLMCVGVRSFDSLHEKTQELKKAFLDCSADGMAPVIVFVSKMF
AVDPKALPQNKQRPLTHEEIGQRRELARQRHAERQVANQNAEAPKSTDKGRASIPSAPAN
SSVTDSLCAQTETLSVKAAVEDESREHFVAFARVYSGVIRKGQKVFVLGPKYDPSLALRT
LPEDCSASDVLSAVPHMACCTVDKLYLMMGRELEELDEVPSGNVLGIGGMEEFILKSATI
STSPACPPFTALNFEATPIVRVAVEPKHPSEMPKLVRGMRLLNQADPCVEVLIQETGEHV
LVTAGEVHLQRCLDDLRERFAKIEISASKPIIPFRETVVRPPKLDMVNEELGRQHKMAVI
HQDKDDQTKYSEGVQVDSTGLVTLTTSNKMATVGVRAIPLPEEVTHLLEDNVELIRTMEQ
FSVFAREGKTLDINQKILESIQDLKVKLESLLQGHKWRGAVERIWAFGPRRCGPNILLNN
VEGYPRPSMWQCLEGERAEMATFRDFDNSIISGFQLATLAGPMCEEPLMGVCFSVETWDM
TFSAPLAQHDSFDKAMITEPNTVNQSGSSEKDAREMDMSLSNQSRSRAEAAGSSMDCYGP
FSGQLIAAVKETCRYAFQAKPQRLMAAMYTCEIMATAEVLGRMYAVLSKREGRVLHEEMK
EGTDMFIIKAVLPVAESFGFAEEIRKRTSGLASPQLVFSHWEVISSDPSWVPTTEEEYLH
FGEKADSSNQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgggacacacaagtttggagaagatcattgccctacagaagaaaacatcaagcattagg
aatatgtgtattcttgctcatgtggatcacggaaagacaacattagcagattgcttggtt
gccacgaatggcattatatccagccgcttagcaggaaagttgagatacctggacagcagg
gaagatgagcagatcagaggaatcactatgaagtccagcgccataacattacattacaca
acaggagagaacgaatacctcataaatctcatcgactctcccggtcatgtggacttctct
tctgaagtgtccactgctgtcagactgtgtgatggagctatcgtcattgtcgacgccgtc
gagggggtttgtccgcagacgcaagtcgttttacgtcaggcttggctggagaacatccgt
cctgtgctcgtcatcaacaaaatcgaccgtctgatcgtggagctgaaactcacaccacaa
gaggcgttcatacacctgcagaagatactggagcaggtgaatgcggtaacgggttcatta
ttcacatctaaagttctggaggagcgtgcagagaaagacgcaggagctcagagcatcaca
acggagaacagcgccggagatcaggtgtacgactggagcgctggtctggaagaaaccgat
gactctgatctctacttcagccctgaccggggtaatgtggtgtttgccagcgctatggat
ggatggggtttcaggatccatcagtttgcagagatgtacagtcagaagatgggcatccgc
tcctgggttctgctcaagaccctgtggggagatttctacctcaacactaaatccaaaaga
atcatgaagggagcgcagtctaaaggaaagaagcccctgtttgtccagctcgtactggat
aatatctggagtctttatgatgctgtggtcactagaagggacaaagaaaaagtggagaag
atggtgacctctctggggttaaaggtcatgcctcgtgacctaagacactcggaccccaaa
gtgctgctgtgtgccatttgtagccagtggctgccggtgtctcaggcggttctctcgatg
gtgtgtgaaaagctgcccagcccggccgagatgtcgtctgagagagcggagaagctgatg
tgcgtaggagtgcgcagcttcgattctctgcatgagaaaacgcaggagctaaaaaaagca
tttctggattgttcggctgatgggatggcgccggtaatcgtctttgtgtcgaagatgttt
gctgtggaccccaaagctcttccacagaacaaacagaggcctttgactcatgaagagatc
ggccagagaagggaactagccaggcagcggcacgccgagagacaagtggccaatcagaac
gcagaagcccccaagtcaactgataagggaagggcttcaatcccatcagcccctgccaac
agcagtgtcacagattctttgtgtgcacagacggagactctttctgttaaagccgcagtc
gaagatgagagcagagaacatttcgtggccttcgcgcgggtttacagcggagtcatcaga
aaaggtcaaaaggtgttcgtgctcggacccaaatacgacccgtcgctggctctcagaacg
ctgccggaagattgttccgcatcagatgttttgtccgctgttcctcacatggcctgctgt
acggtggacaaactttacctaatgatgggtcgtgagctggaagaactggatgaagttcct
tcaggaaatgttctcggtattggaggaatggaggaattcattctcaagtcggccaccatc
tcgacgtctcccgcctgccctccctttacggcactcaacttcgaggccacgcccatcgtc
agggtcgcagtcgagcccaagcatccaagtgagatgccgaagctggtgcgaggtatgagg
ctgctgaaccaggccgacccgtgtgtggaggtgttgattcaggagacgggcgagcatgtt
ctggtcactgcaggggaggtgcatctacaacgctgtctggatgacttaagggagaggttt
gctaaaattgagatcagcgcttccaaaccgatcattccgttccgtgagacggtggtccgg
ccgcccaagctggacatggtgaacgaggagctgggcaggcaacataagatggcggtcatt
caccaggataaggatgatcaaaccaagtattccgaaggagtacaagtggattccaccggc
ctggtcacgctcaccacctctaacaagatggccactgtcggggtccgagctattccgctt
ccagaggaagtcacccacctgctggaggacaacgtggagctcatccgcacaatggagcag
ttcagcgtgttcgccagggagggcaagactctggacatcaaccagaaaattctggaaagc
atccaggacctgaaggtcaaactggagagcctcctgcagggccacaaatggaggggtgcc
gtggagcgtatctgggcattcggtccacgccgatgtgggccaaacattcttcttaacaac
gtagagggctacccgagaccttccatgtggcagtgtttggagggagaaagagccgagatg
gccacgtttagagactttgacaacagcatcataagtggctttcagttggccacactcgca
ggccccatgtgtgaagaaccgctgatgggcgtttgcttctcagtagagacctgggacatg
acgttttctgcacctctagctcagcatgactcctttgataaggccatgatcacggagcca
aatacagtcaaccaaagtggaagttctgaaaaagatgcacgtgagatggacatgtccctg
agcaatcaaagcagaagtagagcagaggcagcagggagttcaatggactgttacgggccg
ttttccgggcagctcatcgccgctgtgaaggaaacctgtcgatacgccttccaggccaaa
cctcagcgactaatggctgccatgtacacctgtgagatcatggccactgctgaagttcta
ggtcggatgtatgcggttttatctaaacgtgaaggacgagtcctgcatgaggagatgaag
gaagggacggacatgttcatcattaaagctgtacttcctgttgccgagagcttcggattc
gctgaggagatcagaaagaggaccagcggcctggccagtccacagctagtgttcagccac
tgggaggtgatctctagtgatccgtcctgggtgcccactacagaggaggagtatttacac
tttggagaaaaagcagattcctccaatcaggctctgaaatacatgaatgctgttcggaga
cgcaagggcctgtacgtggaggagaagatcgtagaacatgcggaaaaacaacgaactcta
agcaaaaacaaataa
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