KEGG   Triplophysa dalaica: 130410624
Entry
130410624         CDS       T09616                                 
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1
  KO
K11757  protein polybromo-1
Organism
tdw  Triplophysa dalaica
Pathway
tdw03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130410624 (pbrm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdw03021]
    130410624 (pbrm1)
   03036 Chromosome and associated proteins [BR:tdw03036]
    130410624 (pbrm1)
Transcription machinery [BR:tdw03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130410624 (pbrm1)
Chromosome and associated proteins [BR:tdw03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    130410624 (pbrm1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 130410624
NCBI-ProteinID: XP_056591381
LinkDB
Position
21:15338001..15357220
AA seq 1623 aa
MGSKRRRATSPSSSVSGGDFEDSQTPSIPSTSRKRRRITNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQLTADFQLLF
NNAKTYYKPETPEFKAACKLWDLYIRTKNEFVQRGDYDEDDDDGEDAQENPAGSTEEESV
SSLKEVLTQLLDAVLTYTEHGRVISELFQRLPSKVQYPDYYAIIKEPIDLKTIAQRIQMG
YYKSVNHMAKHIDLLAKNAKCYNEPGSQVFKDANTIKKIFAQRKMELEHAEPVKTSIRIR
NRRFAQGDRLSSITTALQYGSESEEDAILTGSIHYDEGESEAESIHSSMDVSNPIFQLYE
AVRGSRNSQGQLLAEPFFQLPSRKDYPNYFQQITHPISLQQIRSKMRNNEYDSVEQMESD
LNLMFENAKRYNVPNSQLYKRMLKLQQIFQMKRRELMRRYDEDGDSMLSSTLSDGGTTKR
KSYKKNTKKNRMKALYASVAEAREMGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLRTI
DHNIRSDRYPSEDSMMENMKLMFRNARHYNEEGSQVYNDANILEKILREKRRDLGPPPDD
DDIISPKMKIRKSGISPKKSKYLTPLQQKLNELYESVKNYTDKRGRRLSAIFLRLPSRAE
LPDYYVAIKKPIDMEKIKGHMLSNKYQDVDALVEDLVLMFNNACTYNEPESLIYKDALVL
HKVLLETRRDLDCAEDARVPDVARLIQELVRNLFVSVLGHQDDEGRCYSDSLAEIPAADP
NNPEKPPLNFEIIRANVDKGRYRRLDVFQDHMFEVLEKARRLHRTDSEIFEDSVELQQFF
IRIRDELCKNGEILLSPALSYTTKHLHSDVEKEKKEKLPKEYEEDKLKREEEKKEAEKSE
DSAGGGWQGVLQRNFSQDCSFKDNMYHVGDYVYVEPTEPNLQPHIVCIERLWQDDAGEKW
LYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFVKEYFKLQPDNFR
PEDIFVCESRYSAKTKSFKKIKMWTMPLSSVKFVPREVPLPVVRVASMFAPKLDSEKPPE
VPEDGKAAPSVIDKEREDVTMEISNGEPGCQYYEQLCYNDTCLKVGDCVYIRSHVLVRNR
VGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCIGGKCTV
SSFKDFLSCRPTEMPEEDVLLCESRYIESDKQMKKFKGLKRFSMSAKVVEDEIFYFRKLI
VPQKEPSPLLDKKIEELEAKFADMTDEELEELGDDDGDGSDGHMPQLQTSLSGDMDMLHY
APPQSTPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWR
SLEATKKAEYEERAAKVAEQQERERAHQQNPRAGTPVGALMGVVPPPTPMGMLSNSMTPM
AGMMGSYRPVGNMINKVGMPPHPMMVPALPLHPLWGRPGMPYLGMNGMTPGSTGNTYGNQ
MGVMNSGQQAPPPYPGQVGQPAFQQPSTPIFVAPPPKPQRLLHSEAYLKYIEGLSADSTT
VSKWDQTLSVRRKDVRLSKEQESRLPSHWLKSKGAHKTMADALWRLRDLMLRDTINIQQT
YNI
NT seq 4872 nt   +upstreamnt  +downstreamnt
atgggctcgaagcgacggagagccacttctccgtccagcagtgtgagcggaggagatttt
gaggacagtcagaccccgtccataccttcaaccagccgaaagaggagaagaatcacaaac
attcccactgttgaccctattgctgtgtgtcatgagctgtacaacactatcagagactac
aaggatgatcagggtagaatgctttgtgaacttttcataagagcaccaaaaagaaggaat
cagccggattattatgatgtggtgtctcaacctattgacatgatgaagatccagcaaaag
ctgaagatggaggagtatgatgatgttgagcagctcacagcagactttcagctccttttc
aacaatgccaagacgtattacaaaccggagactccggagttcaaggcggcgtgtaaactt
tgggatctgtacatccgtaccaaaaatgagtttgtgcagcgtggggactatgatgaagat
gatgacgatggtgaagatgcacaagaaaaccctgcagggtccaccgaggaggagtccgtc
tcaagccttaaggaagttctcacgcagcttctggatgctgtgctgacatacacagaacat
ggacgtgtcatcagtgaactgttccagagacttccctctaaagtgcaatatccagattat
tatgctattattaaggaaccaatagatctgaagaccattgcacagagaatacagatggga
tactacaaaagcgtaaaccatatggcaaaacacattgacctgttagccaaaaatgccaaa
tgctacaatgaacccggatcccaagtatttaaagatgcaaacactatcaaaaagatcttt
gcacagaggaagatggaacttgaacacgctgagccggttaaaaccagcatcagaatcagg
aataggaggtttgcacagggagatcgtctctcttctatcactacagctctacagtatggt
tcagagagtgaagaagacgccatactaactggctcgattcattatgatgagggcgagtct
gaagccgagagcatccactccagcatggacgtgagcaatcccatcttccagctgtatgag
gcagtacggggcagcaggaacagtcaagggcaactcttagccgaacccttttttcagctg
ccctccaggaaagactaccctaactactttcagcaaatcacccatccgatctcactccaa
cagataaggagtaagatgaggaataatgagtatgatagtgtggaacagatggaatcagat
ctcaacctgatgtttgagaacgcgaaacgctacaacgtccccaactctcagctctacaag
cgtatgctaaagctgcagcaaatattccagatgaagagaagagaactgatgaggagatat
gatgaagatggggacagcatgctctcatccactctttctgatgggggcacaaccaaacgc
aaaagctataagaagaacacaaagaagaaccgaatgaaggctctatatgcttccgtggca
gaggctcgagagatgggaacagggcgaaggctctgcgatctcttcatggtcaaaccctca
aagaaagactacccagattactacaagatcatactggagccaatggacctgaggaccata
gaccacaacatccgctctgaccggtaccccagcgaggactcaatgatggagaacatgaag
ctgatgttccgtaacgctaggcactataatgaagagggatcacaggtttacaatgatgcc
aacattctggagaagattttgagagaaaagcgaagggacctcggacccccgcctgatgat
gatgacatcatttcacccaagatgaaaattagaaagagcggcatctctcctaaaaagtcc
aagtacctaacgcctctgcagcagaaactcaacgaactttacgaatctgtcaagaactac
accgacaagcgtggccgtcgtctcagcgccatcttcctccgtctcccatcccgtgccgag
cttcccgactactatgtggccatcaagaaacccatagacatggagaagatcaagggtcac
atgctatccaacaaatatcaggatgttgacgcgctcgtggaagatttagtgttgatgttc
aacaacgcttgtacttacaacgagcctgaatctctcatctataaagacgcattggtgctt
cacaaagttcttttggagaccaggagagacctggattgcgctgaagacgcccgtgttccg
gatgtagcgagacttattcaggaactggtacgcaatctttttgtgtccgtgcttggtcac
caggacgatgaggggcgttgctatagcgactcgctggcggagattcctgccgccgatccc
aataatccagagaagccgccattgaactttgagatcatcagagcaaacgtggataaagga
cgttataggcgactagacgtgttccaggatcacatgtttgaagtcttggagaaagccaga
cgtctgcataggacggattcagagatctttgaggattctgtggagctccagcagttcttc
atccggatcagagatgagctgtgcaagaacggagagattctcctgtcgcccgccctcagc
tacaccactaaacacctgcacagtgatgtggagaaggagaagaaagagaagctgcccaaa
gagtatgaagaggataaactcaagagagaggaggaaaagaaagaggctgagaagagcgag
gattcagctggtggtggatggcagggagtccttcagcgtaacttcagtcaggactgcagc
tttaaagataacatgtaccatgtgggagattatgtgtatgtggagcccacagaacctaac
ctgcagccacacatcgtatgcatagagcgcctctggcaggatgatgcaggagagaagtgg
ctttatggctgctggttctacagacccaatgaaacatttcacctggccacacgcaaattt
ctggaaaaggaagttttcaaaagcgactactacaacaaaattcctgtcagtaaaattttg
gggaaatgtgtcgtaatgtttgtaaaggagtatttcaaacttcagccagacaacttcaga
cccgaagacatttttgtttgcgagtctcgctactctgcaaagaccaagtctttcaaaaag
atcaagatgtggacgatgcccctgagctctgtcaagtttgttccccgtgaagtgccatta
cctgtggtccgtgtggcctcgatgttcgcccccaaactggacagcgagaagcctcccgag
gtgccggaagatggcaaagctgcaccttctgttatagataaagagagagaggatgttacc
atggagatcagtaatggagaaccaggttgtcagtattatgagcagctctgctacaatgac
acgtgtttaaaagtgggagattgcgtctacatccgatctcatgtgctcgtgcgcaaccgt
gtgggcagaattgaaaagatgtgggtgcgagatggagctgcctattttttcgggcccatc
tttattcacccggaggagaccgagcatgaacccaccaagatgttctataagaaagaagtt
tttctcagcaacctggaggaatcctgccctatgacttgtataggagggaagtgcacagtg
tcttcttttaaagactttctgtcatgccggccgactgagatgccggaggaggacgtactg
ctgtgcgagagccgctacattgagagcgataaacagatgaagaagttcaaagggctgaag
cgtttctctatgtctgccaaagtcgttgaagatgaaatcttctacttcagaaagctcata
gttcctcagaaggagccttccccactgttggataagaagatcgaggagctggaggccaag
tttgctgatatgacggacgaagagctggaggagctgggtgatgatgatggagacggctct
gatggtcacatgcctcagcttcagacttctctgagtggcgacatggacatgctgcattac
gccccaccacagtccacgccgaagtcaataaaggggctgtcaaagaaggaaggggcaaag
aggaagatcaacatgagtggctacatcctcttcagcagcgagatgagggccgtcatcaag
gcccagcaccctgacttctctttcggagagcttagtcgactggtgggcacagagtggaga
agcctggaggccacgaagaaagccgaatatgaagagcgggcagctaaagtagcagagcag
caggaacgagaacgggcgcatcagcagaacccgagagcaggtaccccagtaggggcactc
atgggggtggtgcctcccccgacccctatggggatgcttagcaacagcatgacgcctatg
gcaggcatgatgggtagctacaggcctgttggtaacatgattaacaaggtcggcatgcct
cctcatcccatgatggtgcctgccttacccctccaccctctgtggggtaggcctggtatg
ccatatctgggtatgaatggaatgactccgggatccacaggaaacacttacgggaatcag
atgggcgtgatgaactcaggccagcaggctcctcctccgtacccgggtcaggttgggcag
ccagctttccagcaaccctccacacccatatttgtagctcctcctcccaaaccccagcgt
ctcctacattcagaggcatatctgaagtatatcgaaggtctgagtgccgactccactact
gtgagcaaatgggaccaaacactttctgttcgcaggaaagatgtgcgtctctcaaaagag
caggagagccgtctcccctctcattggctgaagagtaaaggagcccacaagactatggcc
gacgctctgtggcgactgcgggacctgatgcttcgcgacactataaacattcaacagaca
tacaacatctag

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