Triplophysa dalaica: 130410721
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Entry
130410721 CDS
T09616
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130410721 (rfx1b)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Other basic domains
RF-X
130410721 (rfx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
130410721
NCBI-ProteinID:
XP_056591531
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All DBs
Position
2:3947810..3958431
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AA seq
859 aa
AA seq
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MSNSDFLSGIQSAVVMATSGYPTEELQPSQTQGSSVTTSSSAQQKATCSTTPQFPANIQS
SPASAPSHSASIARLQTTPINQKKVVLATPPPRATPIAQYVTGELQSSASQSGNGQSTSQ
FIVVTVTEGSLHSSDSVSDSNSPPAGQTGVPTQVVQQVQTAQRSGVQGTSKSQRGQLGDS
NLHITTDVPVQHVYSSQFGEGDANYSSTPIRSNSFPYTDSSLYPQTTPSIAYYETSPTSG
SQVTSPATTQVVSVTSGAVTGVASMFSEGSSGITVPAGSSTGIGGVGGVVSPGGVGSYVI
PCGYMLGGGNQSFSQNTRASPATVQWLMDNYETAEGVSLPRSTLYCHYLLHCQQTKLEPV
NAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKSSSPLLRLLEDQQHLALRQQPFS
QKQRIKSMHKVEGLTNGMALGAGQQLGAGLSDISGQVHQYQQFLDASRGLPEFRELKALD
KCLPVGLLPQHIHNYQLLYREHCEAIQDVMVNLQFSLVETLWKSFWRFSEGQSNSADSLD
LHDESEKRLPKSVLVLLCKYEPVLSWTRDCDNILYQSLVEILIPDVLRPIPSALTQAIRN
FAKSLENWLTNALINIPEEMVSYKVVCAGAFAQTLRRYTSLNHLAQAARAVLQNTAQITQ
MLSDLNRVDFTNVQEQASWVCSCDDGVVQQMEQDFKMTLQQQNSLEQWAAWLDGVVSQVL
KPYTGSSAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHR
VAQAKGETPIAVMGEFASMNRGQRSTDPDKDEEDEEEDDETDEDQDLSAHAHSIVMGDES
LEPPAKLARADLFNSSTQN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagcgactttttaagtgggattcagtctgccgttgtcatggcaacctcaggc
taccccaccgaggagcttcagccctcccaaacgcaaggaagcagcgtgacgacaagctca
tctgcgcagcaaaaagccacttgttctacaacaccgcagttccccgccaacatacagagc
tcgccggcatccgcgccttcacactcggcctccatcgccagattgcagaccacacctata
aatcaaaagaaagtggttttggccacgcctcctccgagagccacacccatagcccagtat
gtcacaggagaactacaaagctccgcctcccagtctgggaatgggcagagcacatcacag
tttatagtggtgaccgtaacagagggctctctgcactcgagtgactctgtgtcagactct
aattctcctccagctggacagacaggtgtgccaacacaggtagtgcaacaggtgcagaca
gcacagagatcaggggtgcagggaacaagcaagagtcagagaggacagctgggggacagt
aatctacacatcacaactgatgttcccgtacagcatgtgtactccagtcagtttggggaa
ggagatgccaactacagtagtacaccaatccgttccaacagtttcccgtacacagactcc
tccctctaccctcagaccacgccctccatcgcgtattacgagacttcgcccacatccggg
tcgcaggtcacctcccctgccaccacccaggtcgtgtctgtcacctcgggggcggtcacg
ggggtggcttccatgttctcagagggcagttcagggataactgtgcccgctgggtcctcg
acgggaattggaggagtgggaggcgtggtcagtccgggaggggtggggagttacgtgatt
ccgtgcgggtacatgctcggaggagggaaccagagcttctcgcagaacacgcgagcatcg
cctgcgaccgtgcagtggttgatggataactatgagacggctgaaggtgtgagtcttcct
cgtagtactctctactgtcattacctcctgcactgtcagcagaccaagctagagcctgta
aacgccgcctccttcggcaaactcatccgctccgtgttcatggggctcaggaccagacgc
ctcggcaccagagggaactctaagtatcattattatgggcttcgcatcaagagcagctct
cctctgcttagactcttggaggaccagcaacatctggccttgagacaacagcccttctcg
cagaaacagaggataaagtccatgcataaggtggaaggactgaccaatggaatggctctg
ggggcggggcagcaactgggggcggggttatcagacatcagcggtcaggttcaccagtat
cagcagtttttggatgcctctcgcggtctgccggagttcagagagctgaaggccctagac
aaatgtctacccgtaggactccttcctcaacatatacacaattatcagctactctacaga
gaacactgcgaggcgattcaggacgtgatggtgaatctgcagttttctcttgtggagacg
ctgtggaaaagtttctggaggttcagcgaaggacaaagcaacagcgcagattcactcgac
ctacatgatgagtcagagaagcgtttgccaaagtcggttctggttctgttgtgcaagtat
gagcccgtcttgtcctggacacgtgattgtgacaacatactgtaccaaagcctagtggag
attctcatccctgatgtgctgagacccatccccagtgccttaacccaagccattcgcaac
tttgctaagagtctggagaactggctcaccaacgccctgatcaacatcccagaagagatg
gtcagctacaaggtggtgtgtgcgggagcctttgcccagacgctgcgacgctacacatcg
ctcaatcacctggcacaggcggcacgcgccgtcctgcagaacaccgctcagatcacgcag
atgctcagcgacctcaaccgcgtcgacttcaccaacgtccaggagcaggcgtcgtgggtg
tgcagctgtgacgatggtgtggtccagcagatggagcaggactttaaaatgaccctgcag
cagcagaactctctggagcagtgggccgcgtggctggacggggtagtctcgcaggtcctg
aagccctacaccggcagctcggccttccctaaagcggctaaactctttttgctcaagtgg
agcttctacagctctatggtgatcagagatctgaccctgcgcagtgccgccagtttcggc
tcgtttcatctgataagactgctgtatgatgagtacatgtattacctgattgagcacaga
gttgcacaggccaaaggagagacgcccattgctgtcatgggagagtttgccagtatgaac
agaggtcagaggtcaacagatccagataaagatgaggaagatgaggaagaggatgatgag
accgatgaagatcaggatttatccgctcatgctcactccatcgtgatgggagacgaatct
ctggaaccgcctgcaaagcttgccagagcagacctgtttaacagcagcacacaaaactaa
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