Triplophysa dalaica: 130410749
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Entry
130410749 CDS
T09616
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw02010
ABC transporters
tdw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130410749 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130410749 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdw02000
]
130410749 (abca7)
Transporters [BR:
tdw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130410749 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
130410749
NCBI-ProteinID:
XP_056591566
LinkDB
All DBs
Position
21:complement(14520111..14545314)
Genome browser
AA seq
2334 aa
AA seq
DB search
MTIGTQLYLLLWKNFTYRRRNKVQLVIELLWPLFLFLILIAVRQSHPVYKQSQCHFPNKA
LPSAGTLAWLQGIVCNINNPCFHHPTPGETPGRVSNFDNSILSRLLVDLRTVLRISGNRT
AFSGLQDLSLAVQRLGERPDAWPNLPVGEYLRANESFTSFLSSNTSIPSEYIDQLLRALL
NLQVVALAGGGLRLSDLVCNASLLSHYLTVKDGDSFPELQGVLCAVPSDIMQRVEQIFLS
ELDFSKILTRERLRANAADLPVLSRAVSSVSQELASVMDDISSLSSFSQLNSELRLLTPT
NRSTLPRESFRAFSRIMCGHPEVGGERIPSFNWYEDQDIKSFLGRNGSEEKNLENDNSTT
PFCENLIRSLESNPLSRIVWRGIKPLFIGKLLYTPDTPLTRAVMAEVNKTFQDFQIMSEV
MEAWQEVGPRIKTYMESSVEIRLLQDLLRRPEVAVLVNLRLESTSWTASRIAHFLSTPDP
DTPRKDGAPPTWLDLYQDLNDTISTLSELTKCFSLNKLEGVATEGQLVERALELLEDRQF
WAGIVFLLPNTSSSSLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FIYVQDLVERAITRLHTDKEPNTGIYVQQMPYPCFVDDAFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVYEKEARLKETMRIMGLSSGMLWLSWFISSFLPFLFSAGLLIAALKVGDILPY
SDPAVIFFFLTAFATATIMLCFLISTFFSRCNLAAACGGLVYFTLYLPYVLCVAWREYLS
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPMEGDDYNFTTSIVMLYVDA
VIYALATWYIEAVFPGQYGIPRPWYFIFQLNYWGGVPLEVGLPIPPAPREETDDRIEAEP
TNLILGVAIRNLVKIYKTGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRIKGMNKEQVKAEI
NTLLEDVGLQHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYREGRTIVLSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKARLGTGYYLTLVKR
DMHRTPSSTSTGKLLSTVVTKDSDSSVSDDTGLGSEDNGFDVSALLTFAQQYIPDARLVE
DIGREAVINLPHAASEDGSLAIFLHELDKRQGEFSVVSYGLSDATLEEIFLRVAEETGVD
ADPEDPVASPGHQRAPSENKDIGRKQPIRKEAQETEPLSGVGQGGGAPLMGWFLMWQQLR
ALFTKRLKYALRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPPLELQPWMYGEQFTF
LSNDAPHDPDIQNLLDALLEPPGFGTKCMNSSSDQECSEDVNSKFLRPQIPYSMWQLFNK
GNWSVERPSPDCECSTENIRRMLPECPEGAGGLPPPQMKRLTGDILQNLTGRNISDYLIK
TYPQILKKSMKTKKWVNEFRYGGFSLGAKSSQAVDEPQYIEESVLAIRRRYSIPENSSFD
QLLHRLPDVLKGFTSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPAGLERSKYGMTA
FNHPLNLTKEQLSEMALMTTSVDVLVSICVIFAMSFIPASFVLFLIEERVSKSKHLQFVS
GVKPILYWTTNYIWDMLNYTVPAAMVVLIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSVPSTAYVVLTSINLFIGINGSIATFVLELFIDEHLNEVNKILKKVFLIFP
HFCLGRGLIDMAKNQAMADAFQRLGTKQNLEPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFINLSPCSGFELPPIGAEDEDVARERERVKNGRAQGDILTLTDLSKVYMAGRKPAVN
RLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTSITYGEAFLSNHSVLTEMEKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVAKVAQWGIQKLGLSQYADREAGGYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSAPAKEPCPVDAYIKNSFPGIQLKE
SHQNVLQYQLLSQSCSLARVFEVLSNTYGELGIAEYSVSQTTLDQVFVNFAKEQTDDDQL
REVTVNGGCAAAQPSRPQRPTHLRLEKPNRPLSPTSSSTDQAAHLRLTPETRPAGSKTRK
NRSNSPSVSRKQKQQIQMEPVGEAANGSKPAGQQTSKDPSALFVVKSKTKDSKM
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgaccattggcactcagctgtacctgctgctgtggaaaaacttcacgtatcgcaggaga
aacaaggtccaactggtcattgaactcctctggccgctctttctcttcctcatcctcatt
gcggtccgtcaatcacacccggtgtataaacagagccagtgtcactttccaaacaaggca
cttccgtcggccggcacgctggcatggcttcagggcatcgtctgcaatatcaacaaccct
tgctttcatcaccccacgcctggagagacgcccggccgagtgagcaacttcgacaactcc
atactctcacgacttttagtcgatctcaggaccgtcctccgcatcagtggaaaccggacg
gctttctctggcctacaagacttgtcgctggcagtccagagactcggggagagaccagat
gcctggccaaatcttccagttggtgaatatctcagagccaatgaaagcttcacatccttc
ctgagttcaaacaccagcatcccctcagaatacattgatcagctcctgagggcactactc
aaccttcaagtggtggcattagcaggtggagggttgcgtctgtctgacctcgtctgtaac
gcatctctcttgagtcattacctcaccgttaaagatggagattctttccctgagctgcag
ggggtgctgtgtgctgtgccatcagatataatgcagagagtggagcagatctttctctcc
gaactggactttagtaagatcctcacgagagaacgattgagagcaaatgcggcagatctg
ccagtcctcagcagggccgtgtcctccgtgtctcaggaactggcctcagttatggatgac
atctcctctctgtccagtttctcacagctaaactctgaactaaggcttttaacacccaca
aaccgttccactctgccacgcgagagctttcgtgccttctccaggatcatgtgtggacac
ccggaggtgggtggagagagaatcccctcattcaactggtatgaagaccaggacattaaa
tcattcctggggagaaatgggtccgaggaaaaaaacctagaaaatgacaacagcaccact
ccattttgtgaaaacttgatccgaagccttgagtcgaaccctctctcacggatcgtgtgg
cgtggcatcaaaccgctgtttatcgggaagctgctatacacaccggacacaccgctcacc
cgtgctgtcatggcagaggtgaacaagacgtttcaggacttccagattatgagtgaggtg
atggaggcgtggcaggaagtaggtcccagaatcaaaacctacatggagagcagcgtggaa
attcgacttttacaggatctactcaggagacctgaggtggcagtgctcgtgaacctgcgc
ttggagagcacctcctggacggcctctcgtatcgcccactttctctccacacctgacccg
gacacgccccgtaaggatggagctccgcccacctggctggatctttatcaagatttaaac
gacaccatcagcactctatcagagcttactaagtgcttttctttaaataaactggagggc
gtggccactgagggtcagctggtcgagcgagctttggagctgcttgaagatcgtcagttt
tgggctggaatcgtcttccttcttcctaacacttcatcatcctcactgcctcctcatgtg
aagtataagatccggatggacatagatgacgtaacccgcacaaacaagatcaaagacaag
ttttgggatccaggcccggctgctgagccctttagtgaccttcgctacgtttggggcggt
tttatttacgtgcaggatttggtagagagagccatcacccgtttgcacacagataaagag
ccaaacacaggcatatatgtgcagcagatgccttacccctgctttgtggatgatgcgttc
atacgtgtcctgaatcgttctttacctctctttatgacactggcgtggatctattctgtg
gcgatgatcataaaaggtgtagtgtatgagaaagaggctcgtctaaaggaaaccatgcgt
ataatgggattgagctctggaatgctgtggctcagctggttcatcagcagttttctgccc
ttcctcttcagtgctggactccttatcgccgccctaaaggtgggagatattttaccatac
agcgaccccgccgtcatcttcttcttcctcactgctttcgccacagccaccatcatgctt
tgtttcctcatcagcacgttcttctcacgttgcaacctggcggccgcatgcggagggctg
gtgtacttcaccctgtacctgccgtatgtgctgtgtgtggcctggagggaatatctaagc
agtacacacaggattttagcgagcttcctgtctcctgtggcctttggctttggctgtgag
tatttctctcagtatgaggaacagggggttgggatccagtggtttaatctaagatccagt
cccatggagggagacgattacaacttcaccacctccattgtgatgctgtatgtagacgct
gtcatctatgcattggccacctggtatatagaagctgtttttccagggcaatatgggatc
cccagaccctggtattttatctttcagttgaattactggggaggggtgccactggaggtg
gggttacctattcccccagcacctagagaggaaacagacgatcggattgaggccgagcca
acaaacctcattctgggagttgccataagaaacttagtaaagatttacaaaacaggggcc
aagcttgcagtcaatcaccttaacataaagttctatgagggccaaataacttcctttttg
ggtcacaatggtgctggcaagacaacaaccatgtcaattctaacaggcctgtttcctccc
accgctggtacgatatatgtaaagggaatggacatccgtactgatatggacatcatccgc
aaaactctgggagtttgtccacaacacaacgtcctcttcgacattctgacggtggaggag
cacgtgtggttctacggccggataaagggcatgaacaaggagcaggtaaaggcagagata
aacacacttctggaggatgtgggcttgcagcacaaacgccacgagcagaccaaaaacctt
tcaggtggcatgcaaaggaaactatccgtggccatcgcattcataggcgggtcaaaggtg
gtggtcttggatgagcccacagccggagtggacccctactcccgacgtgggatttgggac
cttctgctcaaatatcgcgaaggccgaaccatcgttctgtccacgcattatatggatgag
gctgatctgctgggtgaccgcatcgccatcatttcccagggaaagctttgctgctgcggc
acgcctctctttctcaaggcgcgtctggggacggggtattacctcacactggtaaagaga
gacatgcacaggacgcccagcagcaccagcacaggcaaactgctctccactgtagtgacc
aaggacagcgattcgtctgtgagtgatgacactggattgggcagtgaggataacggattc
gacgtgtctgccctgctgacctttgcacagcagtacatccctgatgcccggctggtggag
gacatcggcagagaagcggtgatcaacctacctcacgctgcctctgaggacggcagtcta
gccatctttttacacgagctggacaagcggcagggcgagttcagcgtggtcagttacggg
ctgtccgacgccacgttagaagagatctttctgcgggtggcagaggagaccggtgtggat
gcagaccctgaggaccccgttgcatctccaggccatcagagggcaccgtctgagaacaaa
gatataggacggaaacagccaatcaggaaagaggcgcaggagactgaaccgctgagtgga
gtgggtcaggggggcggagctcctctcatgggctggttccttatgtggcagcagcttcga
gcgcttttcaccaagagactgaagtacgcgcttcgcagtcgtagaggcatctttgcacag
attgtcctgcctgcagtttttgttctcattgctcttctattcagtctcattgtcccgcca
tttgggaagtatccacctctggagcttcagccgtggatgtatggagaacagttcactttt
ctcagcaatgatgccccacacgaccccgacatacagaaccttctggatgcccttctggaa
cctcctgggttcgggaccaaatgtatgaactcgagcagtgaccaagaatgttcagaggac
gtcaactccaagtttctccggcctcagattccctacagcatgtggcagctctttaataaa
ggcaattggagcgttgagcgcccgtcccctgactgtgagtgcagtactgagaatatacgc
aggatgctgcccgagtgcccagaaggagctggaggcctcccacctccccagatgaaacga
ttgactggtgatatcctgcaaaacttgacaggacgcaatatttctgactacctcatcaaa
acatatccccagattctgaagaaaagcatgaagacaaagaagtgggtgaatgaatttaga
tatggaggtttttctctgggggccaaaagctctcaggctgtggatgaaccccagtatatt
gaagagtctgtgttagccatcagaagacgctacagtattccagagaatagctctttcgat
cagctccttcacagacttccagatgtccttaaaggcttcaccagccaaaacaatgtgaag
gtctggtttaacaataagggatggcatgccatggcgtcattcgtgaacatcatgaacaac
ggactcctacgtgccaacctaccagccggcctggaaagaagcaaatacggaatgacagcc
ttcaatcatccactcaacctcactaaagagcagctgtcagagatggccttgatgaccacc
tcagtagacgtcctggtttccatatgcgttatattcgccatgtcattcattcccgccagt
ttcgtgttgtttctcatcgaggaacgtgtcagtaaatctaaacacctgcagtttgtcagt
ggagtgaagcccatcctgtactggaccaccaactacatatgggacatgttgaactacaca
gttcctgccgccatggttgttctgatcttcatcagcttccagcaggaatcatatgtgtct
gagaagaatcttcctgcactggtgcttctcctgctgttgtatggttggtccatcactcca
ctgatgtatccggcgtccttcatcttctcagttcctagcactgcttacgtggtcctcacc
tccatcaacctgttcatcggcatcaacggcagcatcgccacattcgtcctcgagctcttt
attgatgagcatcttaatgaggtcaacaaaatcctgaagaaggtcttcctgatcttccct
cacttctgtctgggtcgaggtctcattgacatggccaagaaccaggctatggcagatgca
tttcagcggctgggaaccaaacagaacctggagcctttatcctgggatttcgtggggaag
aacttgtttgcaatggcgatggagggcattgtgtttttcatcttcactgttctgctgcag
tataaattcttcattaatttgagcccgtgctcagggtttgagctgcctcctattggcgcg
gaggatgaagatgtggctagagaaagagagcgagtgaagaacggtagagctcagggagac
attctcaccctcacagacctgagtaaggtgtatatggcaggcaggaagccagcagtgaat
cgactttgcttgggaattcctcgaggagagtgttttggacttctcggtgttaacggggct
ggaaaaacctcaaccttccgtatgctgactggagacaccagcatcacttatggagaagcg
tttcttagcaaccacagtgttcttacagaaatggagaaggttcatcagctgatgggctac
tgtcctcagtttgatgccatcagtgacctgctgacgggccgagagcacctggagttttat
gctcgcctcagaggagtgccagaagctcatgtcgcaaaggtggcgcagtggggcatacag
aagctaggtctgagtcagtatgcagatagagaggctggcggatacagcggaggaaataag
cgcaaactctcaaccgccatttccctcattggagctgcacctgtcattttcctggacgaa
cccacgacaggtatggacccgaaagccaaacgcttcctttggaactgtatcctcagtgtt
atcaaggagggacgagctgttgttctcacttcccacagtatggaggaatgtgaggctctg
tgtacccgaatggccatcatggtgaacggcagattccagtgtctgggctcagttcagcac
ctgaagaacaggtttggagacggttacactattatcctccgcttgtccgctccggctaaa
gaaccttgtccagtggacgcctacatcaagaactctttccctgggatacagctgaaggag
agtcatcagaatgttcttcagtatcagctactgtcacagtcctgttcactggctcgtgtc
tttgaggttctgtcaaatacctatggggagttgggaatagctgaatactccgtgtcacag
actacactggatcaggtgtttgttaactttgctaaagagcagacggatgacgatcagctc
agggaggtcacggtaaacggcggatgtgcggcagctcaacccagcagacctcagcgaccc
actcatctcagattagagaaacccaacaggccgctctcacccacatcgtcctccacagat
caggctgctcacttgagactaacacccgagactcggccggccggctcaaagaccagaaaa
aacagatcaaacagtccatctgtctccagaaagcagaagcagcagattcagatggaacct
gttggcgaggccgcgaacggatcaaagcccgctggacaacagacgtctaaagacccatca
gcattgtttgtcgtcaaaagcaaaacaaaggacagcaaaatgtga
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integrated database retrieval system
