Triplophysa dalaica: 130411377
Help
Entry
130411377 CDS
T09616
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130411377 (smc5)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
130411377 (smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
FtsK_SpoIIIE
AAA_29
OmpH
AAA_25
Motif
Other DBs
NCBI-GeneID:
130411377
NCBI-ProteinID:
XP_056591948
LinkDB
All DBs
Position
22:complement(192772..206767)
Genome browser
AA seq
1072 aa
AA seq
DB search
MDVPQKRKRVSHEKTNSKLFNSQPTPSTNTNEEGFVEGSIVRIAMDNFLTYDHSEVFPGP
KLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGDKVGLYVKRGCNKGKVEIELYRACGN
LIITREIQVENNQSTWMINKKHSSQKAVEEAVRELHIQVGNLCQFLPQEKVGEFAKMSKI
ELLEATEKSVGPPEMYEFHCELKTFRSKERELENTCKEKANFLEKARQRNERNKLDVERY
YMKKRHLDRIQMLEKKKPWVEYETARKQLEGVKKERDEMKTTLKSLKEAQQPLLRKIRSV
ESQLQPIEQQMKEMTNGIKEASQKCKQKQDRLELKNKVVDDIRQELSLKQTEEADRQKRI
GHTVLMIKDLQKELHNVGSQEDVTPQIEAINVDLKAIQEAKAQLESENLDLRREKDEAFG
ELNRLQNRMRSLDDMMRMKEEKLRTRFRDTYTALMWLRKNKNLFQGNVYEPMMLVINVRD
PRYARYVESHIPVNDLRAFVFQKQEDMETFMTEVRDTQNLRVNSVIAPPDSCSNRLPSRP
LDTLRRYGFFSYLRELFDAPDEVMSYLCHQYRVNDVPVGTETTKNMIETVISEARLRIIY
TAEEKYTVKTSSYSNNVISSNSALRPSQFLTVAIDTEEKRQLEEHLRVAEERVRIIDERM
RAIREELTILSRRDNDLRAKKKQLSELKGKKRNLEQKISTKQDSLRQMEQNKINLQAVEE
ETNAKISAVNNEKLVIMAEYLSHMKTKAKLSMEKVYLALQSAGLAAEKTKLETDCRDSSA
ELKRAELAYTKLDQVKTNLLATCKTLMRRASEICNMTPKETAVPEELHAAFSQLPDTLDE
IDAMLNEEKARAECFTGLSDNVVEEYNRREQEIKNMERELDEKANALNTYRQNIAEAKER
WLNPLKLLVEQINERFSDFFRSMQCAGEVDLHSENDEEYDKYGIRIRVKFRSSTQLHELT
PHHQSGGERSVSTMLYLMALQDLNLCPFRVVDEINQGMDPVNERRVFDIVVRTACGINTS
QYFFITPKLLQNLQYAEEMTILCVHNGPYMLPPNKWNTKAFIRRAKRRQPVH
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggatgttccacaaaagcgaaagcgcgtcagtcacgaaaaaacaaactcaaagctgttt
aatagtcaaccgactccatcaacaaacacaaatgaagaaggtttcgtggagggctcgata
gttcgcattgccatggacaacttcctcacgtatgaccactcggaggttttccccggaccc
aaactaaacatgatagtgggagctaatggcaccggcaaatccagcatagtgtgtgctatc
tgcctggggctggcaggtaaaacagcagtcctgggcagaggagacaaggttggtctgtat
gtgaagcgaggatgtaataaaggcaaggttgagattgagctgtacagggcatgtggaaac
ctgatcataaccagagagatccaggttgagaacaaccagtcgacgtggatgatcaataaa
aagcactctagtcagaaggccgtggaggaggcggtgagagagctgcatattcaagttggg
aacttgtgtcagttccttccacaggagaaagttggtgagtttgctaagatgagcaagatc
gagcttcttgaagccactgagaaatcagtcggcccaccagaaatgtatgagttccactgc
gagctcaagacgtttcgcagcaaggagagggaactggagaacacgtgtaaggagaaagcc
aactttctagagaaggccagacagagaaacgagaggaacaaactggatgtagagcgctac
tacatgaagaaaagacacttggaccggatccagatgctggagaagaaaaaaccatgggtg
gagtatgaaacggcacgaaagcagctcgagggagtaaagaaggagagagacgaaatgaaa
acaacactcaagtcattgaaagaagctcagcagccgctgctcagaaagattcgctcggtg
gagagtcagcttcagcccattgaacagcagatgaaggaaatgactaacggcatcaaagag
gcgtcacagaagtgtaagcaaaaacaggatcggcttgaattgaagaacaaagtggttgat
gacatcagacaggaactcagtttaaagcagacagaagaggcagaccggcagaagcgcatc
ggacacacagttctcatgatcaaagaccttcagaaggaacttcacaacgttggcagtcag
gaggacgttactcctcagatcgaggccatcaatgtcgatctaaaggccattcaggaagca
aaggcccagctggaaagcgaaaacttagacctgcgcagagaaaaggatgaagcctttgga
gaacttaatcgtttgcagaatcgaatgaggagtctagatgacatgatgaggatgaaagaa
gagaagctgcgcacccgcttccgtgacacatacaccgctctcatgtggctgagaaagaac
aagaatctctttcaaggcaatgtctatgagcccatgatgctggtgataaatgtacgtgat
ccacggtatgccagatatgttgagagccacattcctgtcaacgacttgagagctttcgtc
ttccagaagcaagaggacatggagacgttcatgactgaggtccgagacacacagaatttg
agggttaacagtgtgattgctcctccagattcatgctcgaatcggctgccatcacgaccc
cttgatacgttaaggcgttacggcttcttctcatacctccgtgagctgtttgacgctccc
gatgaggttatgagttacctttgtcatcagtaccgagttaatgatgtgccagtgggaaca
gagactaccaagaacatgatagaaacggtgattagcgaggcaaggctgaggattatctac
accgctgaggaaaagtacacagtgaagacctcctcttactctaataatgtgatctccagt
aactccgccctacgcccctctcagttcctcactgtggctatagatactgaggagaaacga
caactggaggaacatctgagggtagctgaagagcgggttaggattatcgatgagcgaatg
agagccattcgtgaggaactgactattctgagtcgccgtgataatgatctgcgtgcaaaa
aaaaagcaactgtctgagcttaaaggcaagaagagaaacctggagcagaagatcagcaca
aaacaggacagtttgaggcagatggaacagaacaagatcaacttgcaggcggtcgaagag
gaaacaaatgcaaagatctccgctgtaaacaacgagaaactggtcataatggcagagtat
ctgagtcacatgaagacgaaggcaaagctgagtatggagaaggtgtatttggctcttcag
agcgcaggtctcgctgctgagaaaaccaaactggaaacggactgcagagacagttcagcg
gagctcaagcgagctgagctagcgtatactaagctggaccaagtgaagaccaacctgttg
gccacgtgtaagaccctgatgagaagggccagtgagatctgcaacatgactcctaaagag
acggcagtcccagaagaattacatgcagcgttcagccagttgcctgatactctggatgag
attgatgccatgttgaatgaggagaaggccagagccgagtgcttcactggtctcagtgac
aatgtggtggaggaatataaccgccgtgagcaggagattaagaacatggagagggagcta
gatgagaaggccaatgcactaaacacttacagacaaaacatcgctgaggctaaggagcgc
tggctgaatcctctgaagctgttggtcgagcagataaacgagagattcagtgatttcttc
cgctcaatgcagtgtgctggagaggtggatcttcactccgagaatgatgaggagtatgat
aagtacggcatccgcatccgtgtgaagtttcgcagtagcactcagttgcacgagctcacc
cctcaccatcagagtggaggagagcgcagtgtatccacgatgctgtacctcatggccctg
caggaccttaacctctgtccctttagagtggtcgatgagatcaatcagggtatggaccct
gtgaatgagcgacgagtgttcgacattgttgtgaggactgcttgcggcataaatacatca
cagtatttcttcatcacacccaagcttctacagaacctgcagtacgcagaggagatgacc
attctgtgtgtgcacaacggaccctacatgcttcctcccaataaatggaacaccaaagcc
ttcatcaggcgagccaaacgtcgccaacctgttcattaa
DBGET
integrated database retrieval system
