Triplophysa dalaica: 130411641
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Entry
130411641 CDS
T09616
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tdw
Triplophysa dalaica
Pathway
tdw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130411641 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130411641 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130411641 (vps36)
Membrane trafficking [BR:
tdw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130411641 (vps36)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130411641 (vps36)
Exosomal proteins of colorectal cancer cells
130411641 (vps36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
130411641
NCBI-ProteinID:
XP_056592404
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All DBs
Position
22:11000804..11007218
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AA seq
382 aa
AA seq
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MDRFMWTNGLLEMNETLVIQQRGVRFYDGDDKAKLDVGIVLLTTHRLLWRDQKNHECCIY
MPLSQIIFFEEQAAGIGKSAKIVIHLHPVSENKEPGPYQKSKYSYIKLSFKEHGQIEFYR
RLTEEITRKQWENTPVSQPIPTGTGPKAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFEALKLP
LRLRIFDSGVMVVQLQSHSEEEMIASALDNVTEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKIGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttatgtggacaaatggactccttgagatgaacgagacgttagttatccag
caaagaggagtgcgattttacgacggggacgataaggctaaacttgatgtgggaattgtt
ctactgactacacatcgcttgctctggagagaccaaaagaaccacgaatgctgtatatac
atgcccctgtcacagattatattttttgaagagcaagcagcaggcattggaaagagtgcc
aaaattgtcatccacctgcacccggtctccgaaaataaggagccaggcccctaccagaag
agcaagtattcttacataaagttgtccttcaaggaacatgggcagattgagttttacaga
cgtctaacagaggagataactcggaaacaatgggagaatacgcctgtgtcacagccgata
cccacgggaacaggacccaaggcaggaaggacacgcgctgtggggattgtgggtattgag
cggaaattggaggagaagagaaaagagacagataaaaatatttcagaggcttttgaggat
ctaagcaaactgatggaaaaggctaaagagatggttgagctctccaaatctattgccaat
aaaatcaaagacaaacagggtgacatcacagaagatgagactatccgcttcaagtcttat
ttgctgagtatgggcatagccaacccagttaccagagaaacacacggttcaggaacacag
taccacattcagctcgccaaacagctcggggacatgctgcaggctccactggaggaacgg
ggaggaatgatggccctcactgaagtgtactgtctagtgaacagagcccgagggatggag
cttctctctccagaggacttggtcaatgcctgtaagatgtttgaggcacttaagctccct
ctgcggttgcgaatatttgacagcggggtgatggtggtacagctccagtcccacagtgag
gaggagatgattgcctcagctctagataatgtgactgaaaagggctcacttacagctgaa
gagtttgccaagcttttaggactctcagttcttctttctaaagagcgattgttattagcc
gagaaaattggtcacctatgccgtgacgattcagtagaaggtctgcgcttttatccaaac
ctgttctga
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