Triplophysa dalaica: 130411784
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Entry
130411784 CDS
T09616
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130411784 (ddx55)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130411784 (ddx55)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
Helicases
130411784 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
EF-hand_7
YbjM
Motif
Other DBs
NCBI-GeneID:
130411784
NCBI-ProteinID:
XP_056592641
LinkDB
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Position
22:17675203..17678949
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AA seq
602 aa
AA seq
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MENITDGKWESLPVKLHDSISQTLKELKFTYMTPVQSACIPLFMRNKDVAAEAVTGSGKT
LAFVIPVLEILLKREEKLRKMQVGALIITPTRELALQITEVMGRFLEKFPQFRQILLIGG
SNPIEDVEKFKNQGANIVVATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEMSLNTILEYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRVTVKEKGVAESSVQKTPA
RLSNYYTVCRAEEKFNNLVAFLRQHKHEKLLVFFSTCACVEYFGKALEVLIKGVAVRCIH
GKMKEKRNKIFAGFRELKSGILVCTDVMARGIDIPEVNWVLQCDPPSCASSFVHRCGRTA
RIGNHGNALVFLLPMEESYVNFLSINQKCPLQQFPPVKDVVDVLPKLKTLALGDRAVYEK
GMKAFVSYVQAYAKHECSLIFRMKDLDFATLARGFALLRLPKMPELRGKTFPNFTEESID
TDTIRFKDKNREKQRQKMLAQQKIDEKDQVLRKNFVKKNAWSKQNDKKVKKKKMAAKRKR
DEGSDVDDEDIKELLKDARLLKKLKKGKISEEDFEKHMNTAETSKHRRAAATHADSPNDD
GE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcacggatgggaaatgggaaagtttacccgtgaaacttcacgacagcata
tcacagactcttaaagagctgaagtttacatacatgacaccggtccagtccgcctgcatc
cctttgttcatgagaaataaagatgttgctgctgaggctgttactgggagtggaaagact
cttgcctttgtgattcctgttttagaaatccttttaaagcgagaagagaagttgagaaag
atgcaggtcggtgctctgatcataacacccacccgtgagctcgccctgcagattactgaa
gtgatggggcgatttctggagaaattccctcagtttagacagattcttttaatcggcggc
agtaaccccatcgaagatgtcgaaaagtttaaaaaccagggagccaatatcgtggttgcc
actcctggccgtttggaggacatgttcaggaggaaggctgatggcctggatctggccacg
gccgtgaagtctctggatgtgttagtgttggatgaggcggatagattgttggacatgggc
tttgaaatgagtttgaacactattctggagtatttgcccaagcagcgacgcactgggctt
ttctctgccacacagacgcaagagctggagaagttagtgagggctggtctgagaaatccc
gttcgtgtcacagtgaaggagaaaggcgttgcagaatcaagtgtgcagaaaaccccagcg
aggctcagtaactattatacagtttgtcgagcggaggagaagttcaacaatctggtggcg
tttctcaggcagcacaaacacgagaagctgcttgtgtttttcagcacctgcgcatgcgtg
gagtatttcgggaaagccctggaggtcttaatcaagggtgtcgccgtccgctgcatccac
ggcaagatgaaggagaaacggaacaagatcttcgcaggtttccgggagctgaagagcggg
attctcgtgtgcacagacgtcatggcgagaggcatcgacatcccagaagtcaactgggtt
ctgcagtgcgacccaccgagctgcgcaagttcgtttgtgcatcggtgtgggcggactgct
cgtattggaaaccatggcaacgcacttgtcttccttctaccaatggaagagtcgtacgtt
aatttcctctccatcaaccagaagtgtcctctgcagcagtttcctccagtgaaagatgtg
gtcgatgttctgcctaaactgaagacgttggctttaggggatcgagcggtgtatgagaaa
ggaatgaaagcttttgtttcgtatgtccaagcgtatgccaaacatgagtgtagcctgata
tttcgcatgaaagatctggattttgctacgctggctcgtggctttgctctcctccgactg
cccaaaatgcctgagctaagaggaaaaacctttcctaacttcaccgaggagagcatcgat
acagacaccatccgatttaaagacaaaaacagagagaaacagagacagaagatgttagca
cagcaaaaaatcgacgagaaagaccaagtgttgaggaagaactttgtgaagaaaaatgcc
tggtccaaacagaatgacaaaaaggtcaaaaagaagaagatggctgccaaaagaaaacga
gatgagggatccgatgttgacgacgaggacatcaaggaacttttaaaggacgcacgtttg
ctgaagaagctgaagaaggggaaaatcagtgaggaagattttgaaaaacacatgaacaca
gcagaaacctcgaaacacaggcgggcggctgccactcatgcggacagtcctaatgacgat
ggagaatga
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