Triplophysa dalaica: 130411917
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Entry
130411917 CDS
T09616
Symbol
scaf4a
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130411917 (scaf4a)
03041 Spliceosome [BR:
tdw03041
]
130411917 (scaf4a)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130411917 (scaf4a)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
130411917 (scaf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Mesothelin
Motif
Other DBs
NCBI-GeneID:
130411917
NCBI-ProteinID:
XP_056592907
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All DBs
Position
22:complement(11378809..11386095)
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AA seq
995 aa
AA seq
DB search
MDAVNAFNHELFSLMDSKPPISRAKMIAITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVVDSIVRQSRHQFGADKDVFGPRFTKNIMGTFENLCLCPTEDRSKIVRVLNLWQKN
GVFKIDVIQPLLDMAAGSSSSGGVDSGPDGASPPSPVREQEQSHPVVTSNSMTATVPQLQ
NSDAFAAVAQLIQSSQGQKLQQMLQNFQPPGKPQSPTVDNNRSQIHLQTQPMTATPSALI
HQHLHHTQQQVEKKATFDTTLLDRFDYDDEPEAGDEGKKDETPSIQPNLGFPEQHLANQM
QHFQQHMMGMSQHQQVVLPSNGQVQGFGLMNSQPFPGIMPPMGQPHTVFHPQNDTFNQIM
AGHQHQERPTNSDATASHFPDDKRSRSRSGSRSPKRRRSRSNSRGRRMRHRRSRSRERRR
QSPHSRSQERRERDRERERRQKGLPAVKNNTLSVCSTTLWVGQLDKRTQQQDVACLLEEF
GQIDSINMIPPRGCAYIVMIHRQDAYRALQKLSRGPNKLNQKAIKIAWALNKGIKTEFKQ
HWDVELGVTYIPWSKIKQEDLDVFKEGGMLDTDSLPPEWRDSQSELEKAEESQNGRPEVR
KMDETPPVVPMQNQVPPVQPIGAVGVPPPGFPGPMNMPPPSFPPGVPPPPGPFIRPGFNP
MQMPPGFLPPGAMPPLGAAGPHPPSAGIKMPPVAGSVEDRSSDPARINNDGTDGFNSGNQ
VPPGGPPGMGMQSPPGLLGSRPGMMPLQRPPGMPPPHMQRFSIPPPRPGMPPMPPQMMPP
RGPPQMMHREPPPRGFGMPPHPHGIRGHFPPPGPPFMRPGGPRPDGPNDHEGRPFRGEPS
GLGRGRDREQDWFGGHRPFGEGHGGERSEGRERFGGWHEEPEKQGGWERERERRDWRRSP
EGERDREKDGGEERSRRSGREPATRERSTRWDKDDRLDRMGNIGEEPSEKLQEPMNIDEP
NANSAEELPEALPDSKASEPIGDNKSVEQTHTEES
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcttttaatcatgagttattttctttgatggactctaagcctccc
atctcgagggccaagatgatcgctatcaccaaatctgcaattaaagccattaaattatac
aagcatgttgtccaaattgttgagaaattcataaagaagtgcaagcctgagtacaaagtc
ccgggtctctatgtggtggattctattgtgagacagtcacggcatcagtttggagctgac
aaagatgtctttgggcccaggttcaccaaaaacatcatgggaacattcgagaacctgtgc
ttgtgtcccacagaggatcggagtaagatagtacgagtgttgaatctgtggcagaaaaat
ggagtgtttaagatcgatgtgatccagccactcttggacatggccgctggatccagcagc
tcaggaggagtggacagtggtcctgatggggcatctccaccgtctccagtgagagagcag
gagcagagtcatcctgtggtgacgtcaaactccatgacagcaactgttcctcagcttcag
aactccgatgcttttgcagcagttgctcaactgattcaatcctctcaaggacagaagctt
cagcagatgcttcagaactttcagcctccaggaaaacctcagtctccaactgtagacaat
aacaggagtcaaatccacctacagactcagccaatgaccgcaacaccatccgcccttata
catcagcatctccatcacacacaacagcaggtggagaagaaggcaactttcgatacgaca
cttctggaccgctttgactatgatgatgagccagaagctggtgatgagggcaaaaaggac
gaaacaccatctattcaacctaatttaggatttcctgaacagcatctggccaatcagatg
cagcactttcaacaacatatgatgggcatgtcacagcatcagcaggttgttctgccatca
aatggacaggtccaagggtttggtcttatgaactcgcagcctttcccaggcataatgcct
ccgatgggacagccacatacagttttccacccacagaacgacacgttcaaccagatcatg
gctggacatcagcatcaggaaaggcccacaaattcagacgcaaccgcgagccatttccct
gatgacaagaggtcaaggtcacgctcaggatcaagatctcctaaaagaagaaggtctcgt
tcaaattcccgtggcagacgaatgcggcaccgccgatcccgttcacgagagcgtcggcgt
cagtcacctcactcgcgttctcaggaaaggagagagagggatagggaacgagagcggcgg
cagaaaggccttccggctgtgaagaacaacactctcagtgtatgcagtacaacattatgg
gtggggcagctggataaaaggacacaacagcaggacgtggcttgtttactagaggagttt
ggtcagatagattcaattaatatgattccccctcgtggttgtgcctacatcgtcatgatc
catcgtcaagatgcctaccgagctctgcagaagcttagcagaggtccaaacaaactcaac
cagaaagccattaagattgcctgggctttaaataagggcattaaaacagagttcaagcag
cactgggatgtggagttgggtgtgacttacataccctggtcaaaaatcaaacaggaagac
ctggatgtgttcaaagaaggaggaatgctggacactgattctctcccaccagagtggaga
gactctcagagcgaactagagaaagccgaggagtctcagaatgggaggcctgaggtgagg
aaaatggatgaaacgcctccagtggtacctatgcagaaccaggttcctcctgttcaacca
attggcgcagtcggggtcccaccgccgggattcccaggacccatgaatatgccaccccca
tcattcccaccaggtgttcccccgcctccaggcccctttatacggccaggctttaaccct
atgcagatgccaccaggatttcttcctccgggtgccatgcctcctctgggggccgctggg
cctcatccaccttcagcagggatcaagatgcctccagttgccggctcagttgaagaccgg
tcaagtgatcctgcaagaatcaacaatgacggaacagatggcttcaactcaggaaaccag
gtacctcctggaggtccaccggggatgggcatgcaatccccccctggtcttttgggttca
agaccaggtatgatgcctttacagcggcccccagggatgccccccccacacatgcaacgc
ttctccattccacctcctcggcccggcatgccacccatgcccccacagatgatgccaccc
agaggtccacctcagatgatgcaccgtgagcctccacccaggggcttcggcatgccacct
catccccatggcatcaggggccacttcccgccacctggaccaccctttatgagacccggc
ggtcctagaccagacgggccgaacgaccacgagggaaggccgttcagaggcgagccctct
ggtctagggagaggcagagatagggagcaagactggtttggagggcatcgtccatttggt
gaaggtcatggcggggagaggtcagaaggtcgagaacggtttgggggctggcatgaagag
ccggaaaaacagggtgggtgggaaagagagcgggaacgaagagattggagacggagtccg
gaaggagagagagatcgagagaaggacggtggtgaggagcgaagcagacgctcaggcaga
gaaccagcgactcgagagagaagcacacgttgggataaagacgatagactcgatcgaatg
ggcaacattggggaagaacccagtgaaaaacttcaagagccaatgaatatcgacgagccc
aacgcaaactctgctgaagaacttcctgaagccttaccagactcaaaagcttccgaacct
ataggagataacaaatctgtcgaacaaacacatacagaagagtcataa
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