Triplophysa dalaica: 130411946
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Entry
130411946 CDS
T09616
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03272
Virion - Hepatitis viruses
tdw03273
Virion - Lassa virus and SFTS virus
tdw04140
Autophagy - animal
tdw04142
Lysosome
tdw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130411946 (lamp1a)
03272 Virion - Hepatitis viruses
130411946 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130411946 (lamp1a)
04142 Lysosome
130411946 (lamp1a)
04140 Autophagy - animal
130411946 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130411946 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130411946 (lamp1a)
04090 CD molecules [BR:
tdw04090
]
130411946 (lamp1a)
Membrane trafficking [BR:
tdw04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130411946 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
130411946 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
130411946 (lamp1a)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
130411946 (lamp1a)
CD molecules [BR:
tdw04090
]
Proteins
130411946 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Nairovirus_NSm
Molybdopterin_N
Motif
Other DBs
NCBI-GeneID:
130411946
NCBI-ProteinID:
XP_056592953
LinkDB
All DBs
Position
2:28113256..28120073
Genome browser
AA seq
410 aa
AA seq
DB search
MMSIRQTVTAGVCLTLMGCLAVTHAVTLEVKDGNSTCIKAVLNANFSITYNSTNGTNSVV
FALPDSASTDNSTCNGTSQRLVASFGDGHALTLVFSRNGSLYGVTQMSLRYNLSDNSTFP
QSNSTDVVTVETNSSRISASMNSTYRCLSSSPVSLNADVTVTFSDVHLEAYMQTGNLSTN
ESVCSADQTVTTVAPPKTTPAPSPLPTGVPERGNYTITSDNTTACLLAVVGLQLNITYFS
TTRNKNVSEVRNLQPNKTSFSGSCGVTVATLILTEDTTNLNFTFTLNSTSQKFHLSAVSV
SARWPDMTVVFSAENSSLQYLQGSVGRSYMCNSEQTLAVMSDFSLNTFRLQLQPFNVTRN
QFSAAEECRMDQENMLIPIIVGAALAGLVLIVLIAYLIGRKRTRAGYQTI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatcagacagacagtgacagcaggtgtctgtttaacactgatgggttgtttg
gctgtgacgcacgcggtcacgctggaggtgaaggacggaaactcaacgtgcattaaagcg
gtactcaacgcgaacttcagcatcacctacaatagcaccaatggcacgaactcggttgtg
tttgctctgccggactccgcgtccacagacaacagtacatgcaacggcacttctcagcgt
ctggtggcgtcgttcggtgacggtcacgcactgactctcgtgttctcaagaaacgggagt
ctctacggggtaacacaaatgagcttacgctacaacctgagtgacaacagcaccttccca
caatccaacagcacagatgtcgtaaccgtggagacgaactcttctagaatatctgcaagt
atgaacagcacgtatcgctgtctgagctccagcccagtctctctgaacgccgatgtcacc
gtcacgttctctgatgtgcatctggaggcgtacatgcaaacaggaaacctcagcacaaac
gagagcgtctgcagcgccgatcaaaccgttacaactgtggctccacccaaaacaacccct
gccccatctccattacccacgggtgtgccggagcgaggcaactacacaatcaccagcgac
aacacaaccgcctgtctgctggctgtcgtgggactgcagctcaacatcacttacttctcc
acaactcgcaacaagaacgtcagtgaggtcagaaacctgcagcccaataagacgtcgttc
tcggggtcatgtggggtcacagtcgccacactcatcctgaccgaagacacgacgaatctc
aacttcaccttcacactgaattcaacctctcagaagtttcatctgagtgctgtgagcgtc
tccgcccgctggcctgacatgacggttgtgttctcagcggagaacagttctctgcagtat
cttcagggcagtgtgggtcgatcatacatgtgcaattctgagcagacgctcgctgtgatg
tcagacttctctctcaacacgttcagacttcagcttcagcccttcaatgtcacaagaaac
cagttctcagcagctgaagagtgtcgtatggatcaggagaacatgctcattcccatcata
gtgggagcagctctggcgggtctggtgctcatcgttctcatcgcgtatctcatcggccgt
aagagaactcgtgctggatatcaaaccatctga
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