Triplophysa dalaica: 130411948
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Entry
130411948 CDS
T09616
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130411948 (ddx56)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130411948 (ddx56)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
Helicases
130411948 (ddx56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
130411948
NCBI-ProteinID:
XP_056592955
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All DBs
Position
22:17847823..17852506
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AA seq
557 aa
AA seq
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MEGLRLEFHEMGLDDRMLKALADLGWAHPTLIQEKAIPLALEGKDLMARARTGSGKTAAY
AVPVIQRILTSKQTVREQAVRALVLVPTKELGQQVQTMIRQLTAFCSRDVRVADISSTAD
ISAQKPILMEKPDIVVGTPSRVQAHISAQNLTLSSLEVLVIDEADLLFSFGFEGDLKILL
CHLPKIYQAFLMSATLNDEVQALKDLVLHNPVTLKLQGSQLPDASQLQQYSVKCEEEDKF
LLIYTLLKLGLVRGKTLIFVNAVERCYRLKLFLEQFSIPACVLNSELPVHSRCHIISQFN
HGFYDYIIATDEHELESPASSSQKSQGKGNKKKAGKSGKGKDKEYGVSRGIDFHNVFNVI
NFDFPSSVESYIHRVGRTARADKPGTALSLISHTELSLLEEVERALIGDASDCVLKPYGF
KMQEIEAFRYRCRDAMRSVTKQAVKEARLKEIKQELLNSEKLKTYFDDNPRDLQLLRHDK
DLHPAVIKPHLKNVPEYLIPNALKSLVNPLYGRKRRFRTRGVDGMRSSFKKNFKTKNPLK
SFRYSKKKHTEKKSSKS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctaaggctggagtttcatgagatgggtttagatgatcgaatgttaaaggct
ctggctgatttgggctgggctcatcccaccctcattcaagagaaagccattccactggca
ctggaagggaaagacctgatggcccgagctcgaaccggttcgggaaaaaccgcagcctat
gccgtaccagtaatccagcggatcctcacctccaaacagacggttcgtgagcaggcggtt
agagctctggtcctggtcccgaccaaagaacttggccagcaggtccagaccatgatcaga
cagctgacggcattctgtagcagagatgtcagagttgcagacatctccagcacagcggat
atatcggcgcagaagcccattttaatggagaaaccggatattgtggttggcacgccatcc
cgagttcaggctcacatcagtgctcagaatctgacgctctcatcattagaagttctggtc
attgatgaagccgatctgcttttctcctttgggtttgaaggcgacctgaaaatcctgctg
tgtcatctacccaagatatatcaggccttcctcatgtctgctacactgaacgatgaagtt
caggctctgaaagacctcgtccttcataatcccgttacgttgaagctgcagggttctcag
cttccagacgcttcacagctccagcagtacagcgtgaagtgtgaggaggaggacaagttt
ctgctcatctacaccctcctgaagctcggcctggttcgaggaaagacgctcatatttgtc
aacgctgtggaacgatgttacagactcaaactgtttctggagcagtttagcattcctgca
tgcgtcctgaactcggaactgccagttcactccaggtgtcacatcatctctcagtttaat
catggattctacgattacatcattgccacagacgaacatgaactagaaagtcctgcttca
agttcccagaaatcccagggaaaaggaaataaaaagaaagcagggaaaagtggaaaaggc
aaagacaaggagtatggtgtttccagagggattgactttcacaacgtcttcaatgtcatc
aactttgatttcccatcatcagtcgagtcgtacatccatcgtgtcggcagaacggctcgg
gcagacaaacctggcactgctctgtcactcatatctcacacagaactttctctgcttgaa
gaggtggaaagggctctcattggagacgcctcagattgcgtcctgaaaccgtacggcttc
aagatgcaggaaatcgaagcgttcagatacagatgtcgggatgcaatgagatcggtgacg
aaacaggcggtgaaagaggcccgactgaaggagatcaaacaggagcttctgaattcagag
aagttgaagacgtacttcgacgacaatcccagagatctccagctgttacgacacgataaa
gatcttcatcccgccgttatcaaacctcatctgaaaaatgtcccagagtacctgattccg
aatgcattgaaaagtcttgtcaatccactgtacggacgaaagcgaaggttcagaacaaga
ggagtggatgggatgagaagcagctttaagaagaatttcaaaaccaaaaatccactcaag
agtttccgatacagtaagaagaaacatacagagaagaagagcagtaaatcctaa
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