Triplophysa dalaica: 130411976
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Entry
130411976 CDS
T09616
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tdw03012
]
130411976 (dhx29)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130411976 (dhx29)
Translation factors [BR:
tdw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130411976 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
DEAD
Helicase_C
OB_NTP_bind
HA2_C
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
AAA_16
nSTAND1
AAA_19
ATPase
NACHT
Motif
Other DBs
NCBI-GeneID:
130411976
NCBI-ProteinID:
XP_056592998
LinkDB
All DBs
Position
22:complement(6298042..6311953)
Genome browser
AA seq
1374 aa
AA seq
DB search
MGGKKKKSAAVPTGAQPAPAATVNASNIAFESTGKKQQQRPNNEKSASKESKPKGPKTYS
LNTNTQTDTSGVSDKSILKVVIQPELEKKVIKLINDYRQEYADKGPISGRLTTKKLLDLY
SALQKFHFKTEHIEEAMKSSVLYGGDLHSALDWLCLNLRDDELPEGFSQKMQEEKQKTRP
TFQPPKEDRTPLAANKDAPKEEEKPKPKTPVKEASVSMKEWILRYAEQSDDQSSEDDESN
DMRKDNPELEEKFDPNDRYLVLAAQLDDAKEMAAQSKAKKDKAGQRTAQDRIRVIQQEMK
PLESHPMFNPAIKVKDTPKEEKKQVSVTDRKEELNFSLFEQTNAPPAAAEKSTRTETKKE
PKDIRNFDYTSRSWTGKSPKQFLIDWCRKNLPKSPPPSFEKKAVGKYWKCRVRVQRPNDV
LEVCPTILTEDGMQAHHLGATLALYDLVKGQSVHQLLPPTYRDVWLEWRDSEQKEEEQSR
CAINKPRDQFIARLLTHLKQQQGNQPQGDPQDTNRDAGDEPEDSWENLDFQEDVEPQRGQ
GLVAEEASRRLFLKLQGSAVARRLLVERQQLPVYQHRQKVLDALRRHRVVVVAGETGSGK
STQIPQFILEDLLAGGGGAQPCNVVVTQPRRISAMSLASRVSQELGSEEGPGSKNSLCGY
QIRMENRSGETTRLLYCTTGVLLRKLQQDQLLSSLTHIIVDEVHERSVQSDFLLTILKEV
VQKRSDLRLILMSATVDCQKFANYFNRCPVVTIPGRTFPVEVFHLDDIVEETGYVLDQDS
EYSQKFVEEEEEVNITITQKGGKTHQHQEVIMRDSGSGCDLGPEFDHFSSRTRRVLQYMN
PNKINMDLILDLLAYLDKSPQFRDVEGAVLIFLPGLAHIQQLYDLLTTDRRFSSKDRYKL
VALHSTLSSQDQSAAFTVPPAGVRKILLSTNIAETGVTIPDVVFVIDTGKTKENRYHESS
QMSSLVETFVSKASALQRQGRAGRVREGFCFRLYPKFRFDSFIDYSIPEILRVPLEELCL
HIMKCEYGSPESFLCQALDPPQQQAVCNAVSLLRKIGACQQDSHTLTPLGHHLATLPVNV
KIGKMLIFGAIFGCLEPIATIAAAMSEKSPFSTPMSRKDEANLAKFALAVAHSDHMTIYN
AYLGWKIARSEGTRAEMTYCRKHFLNRTALMTMEDVKQELIRMVQQAGFIASKTGRAPRS
RPGTDSKALGPLSKQDISVLSAVLAAGLYDNVGRILCSPSPDVQERVMCVVETAQGKANV
HPSSVNRYLQTHGWLLFQEKVKYSKVFLRETTLISPLSMLLFGGDIDVQHRERLVSLDGW
IYFQAPVRVGVIFKHLRKLIDSLLERKLANPEMNLEDEKTIQMIIELIKSDNRL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaagaaaaagaagtcagcagcagtgcccacgggtgcccagccggctcctgca
gcaactgtgaatgcatccaatatagcgtttgaatctacaggcaaaaaacaacaacaaaga
ccaaataatgagaaatcagcctcgaaagaaagcaagccaaaaggtcccaaaacatatagt
ctaaacactaacacacagactgacacaagtggggtgtctgataaatcaatcctaaaagtt
gtaatccagccagaactggagaaaaaggtgatcaagttgatcaatgattacagacaagaa
tatgcagataagggaccaatatctgggagactcacaaccaaaaagttgctggatttgtac
agtgctcttcagaagtttcactttaagacagaacacatagaggaggccatgaagagcagt
gtgctgtatggaggagatctgcactcggcactcgactggctttgtctgaatctccgagac
gatgagctaccagaaggattcagccaaaagatgcaggaggagaaacagaagactcggccc
acgttccagcctccaaaagaggacagaaccccactagcagccaataaagacgcacctaaa
gaagaggagaaacccaagccaaaaactccagtaaaagaagccagtgtcagtatgaaggag
tggatactacgctacgctgagcaatctgatgatcagagcagtgaagatgatgaaagcaat
gacatgagaaaagataaccctgagctggaggagaagtttgatcctaatgacagatacctg
gtgctggccgcacagctggatgatgctaaagagatggcagcacaatctaaagccaagaaa
gacaaagcaggacagaggacagcacaagaccgcatcagagtcatccagcaagaaatgaag
cctttagagtctcatccaatgtttaatcctgctattaaagttaaagacacccctaaagag
gaaaagaagcaagtttcagtgactgacagaaaggaggaacttaattttagtctctttgag
cagacaaatgcaccgccagcagcagcagaaaaaagtacaagaacggaaacgaagaaagag
cccaaagacatccgtaactttgactacacatccagaagctggaccggcaagtcacccaaa
cagtttctgatcgactggtgcagaaagaacctgccgaagagcccgccaccatcatttgag
aaaaaagcagtcgggaaatattggaaatgcagggttcgggttcagaggcctaatgatgtt
ctggaggtgtgtcccactatcctaactgaagatgggatgcaggcacatcacttaggagcg
accttggccctttatgaccttgtcaaaggacagtcggtgcatcaactgctcccacccact
taccgcgacgtgtggctcgagtggcgtgacagtgaacaaaaagaggaggagcaaagccgc
tgcgccatcaacaaaccacgtgaccagttcatcgcacgtctgctcacccacctcaaacag
caacagggcaaccaaccacagggcgacccgcaggacaccaaccgggatgctggagatgaa
ccagaagactcctgggagaacctggactttcaggaagacgttgagccccagcgtggacaa
ggcctcgtggcagaggaggcgtcccggaggctgttccttaaactgcaaggctcggctgtg
gctcgcagacttctggtggagaggcaacagctgcccgtctatcagcaccgccagaaggtg
ctggatgctttgcggcggcaccgcgtggtggttgtcgccggagagacaggaagcgggaag
agcacccagattcctcaatttatcttggaggatctcctggctggtggaggtggcgctcag
ccgtgcaatgtggtggtgacgcagcccaggaggatctcagccatgagtctggccagcagg
gtgtcgcaggagctgggcagtgaggagggaccaggaagcaagaattcactgtgtggatat
caaatccggatggagaaccgctctggggagacaacacgactgctgtactgcactactgga
gttttactgcgaaaactgcaacaggatcagctccttagttctctcacgcacatcatcgtg
gatgaggttcatgagcgcagtgtacaatcagattttctcctcactatactcaaagaagtc
gtccagaagcgatctgacctccggctgatcttgatgagcgccacggtcgactgccaaaag
tttgccaactactttaaccgctgcccagtggtcaccataccaggcagaacattccctgtg
gaggtatttcacctggatgatattgtggaggagacaggctatgttctggaccaggactca
gagtacagtcagaagtttgtggaagaagaagaggaggtgaacatcaccatcacacagaaa
ggaggaaaaactcatcagcaccaggaggttatcatgagggattctggctcaggttgtgat
ctgggacccgagtttgatcacttcagcagtcggacccgccgtgtcctgcagtacatgaac
cccaataaaatcaacatggatctgattctagacctgctggcatacctggacaagtcacct
cagtttcgtgatgtggaaggtgcagttctgatcttcctcccaggtctggctcatattcaa
cagctgtatgatttgctgaccacagacagacgcttcagctcaaaggacagatacaagcta
gtagctcttcactccacgctatcgtctcaggaccagtctgctgcgtttacagtgccccct
gctggagtcaggaagatcttgctatctacaaacatcgctgagacaggcgtcactattcca
gatgttgtgtttgtcatcgacactggaaaaacaaaagaaaatcgataccacgaaagcagt
cagatgagctcactcgtggagacatttgttagtaaagcgagcgctctgcagagacaaggc
agggcggggcgggtcagagagggcttctgttttcgcctctatcccaaatttaggtttgat
agcttcatagactactccataccggagatcctgagggtgcctttggaggagctttgcctt
catattatgaagtgtgaatacggttcaccagagagtttcctgtgtcaagctctggacccc
ccacagcagcaggccgtgtgcaacgctgtcagtctgctgaggaagatcggcgcctgtcag
caagatagccacaccctcacaccgctcggccatcacctggcaaccctgcctgtcaatgtc
aagattgggaagatgctcatatttggtgctatttttggttgccttgaacctattgccact
atagcagcggccatgtcggagaagtcacccttctctacaccaatgagcagaaaggatgaa
gccaacctggctaaatttgctctggcagtcgcccactcggatcacatgaccatctacaac
gcttatctcgggtggaagattgcacgaagtgaaggaacacgagctgagatgacctattgt
aggaaacacttcttgaaccgcactgccctcatgaccatggaggatgtaaagcaggaactc
atcaggatggtgcagcaggccggtttcattgcttctaagactggcagagctcctcgttct
cggcccggcactgactctaaagccctgggtccgctctccaagcaggacatctctgttctt
agcgccgtgctggcagcgggtctatacgacaacgtgggccgtattctctgctctccctct
ccggacgttcaggagcgtgtgatgtgtgtggtggagacggctcaggggaaggcaaacgtt
cacccctcctcagtgaaccgctacctgcagactcacggttggctcctcttccaggaaaag
gtgaaatactccaaagtgtttcttagagaaacaaccttgatctcccctttatcgatgctg
ttgttcggaggcgatattgacgtacagcaccgtgagagactagtttctctggatggatgg
atctacttccaggctccggtcagagttggtgttatcttcaaacacctccgcaagctgatc
gactccctcctggagaggaaactggccaaccccgaaatgaatttggaagatgagaagacc
atacagatgatcatagagttgataaagtcagacaacagactctga
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integrated database retrieval system
