Triplophysa dalaica: 130412032
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Entry
130412032 CDS
T09616
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tdw01100
Metabolic pathways
Module
tdw_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130412032 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tdw01003
]
130412032 (csgalnact1a)
Enzymes [BR:
tdw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
130412032 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
130412032 (csgalnact1a)
Glycosyltransferases [BR:
tdw01003
]
Glycan extension
O-Glycan
130412032 (csgalnact1a)
BRITE hierarchy
Motif
Pfam:
CHGN
Glyco_transf_7C
DUF3450
FAM184
ParcG
ATG16
EzrA
CCDC93_CC
Csm1_N
ATG14
VMAP-M2
Sos7
Fib_alpha
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
130412032
NCBI-ProteinID:
XP_056593102
EnsemblRapid:
ENSTDLG00000017611
LinkDB
All DBs
Position
22:complement(6354872..6388872)
Genome browser
AA seq
575 aa
AA seq
DB search
MSRKDSPTFLNYVILPALLLRWPAVMLRRGLLAWLSRVGILLVVVCCCLSLLYVITCTPH
VDEPLAGQPLPRGGGLGMAGGPSRPGGVGGGPIGPVGREGFHALLQEREEQHRQHIASLK
KQIAQLKEALQERSEQLKGMQNSLEKTAGKVVVVEDHSRNDLQEFLRSQLNRAEAHAGVR
LPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDRRDELAEVVESALHALNVPSRAG
EKTKASKVYTPSDFVEGITRTEKDKGTLYELTFRGEQKQEFRRLVLFRPFGPLMKVKSEL
VETTNMPINIVVPLSQRADKFRQFMHNFREVCVKQDGRVHLTVVYFGKDQINEVKGTLEN
TSREMNFRNFTLIQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIFFTADFLNTCRLNA
QPGKKVFYPVLFSQYNPAVIYGSHIPPVEQQLIIKKDTGFWRDFGFGMTCQYRSDFINIG
GFDVDIKGWGGEDVHLYRKYLHSNLLVVRTPSRGLFHLWHEKRCADELPPDQYKMCMQSK
AMNEASHGQLGMLLFRHEIEAHLRKQKQRSGAKKA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaaagattccccaacctttttgaactacgtcatcctaccagctttgttgttg
aggtggccagctgtgatgctgcgaaggggtctgttggcctggctctcacgtgtaggcatc
ttgttagtggtagtgtgctgctgcctttctctcctctatgtcatcacctgcaccccccac
gtggatgaacccttggcggggcaaccccttcccagaggtggaggtttggggatggcgggt
ggtccgagcagaccgggtggagttggaggtggccccatcggtcctgtcggacgagaaggg
ttccatgccctactacaagagcgagaagaacaacaccggcagcatattgccagcttaaag
aagcaaatcgctcaacttaaagaagctctccaagaacgcagcgaacagcttaagggcatg
cagaactctttggagaagacagccggcaaggtcgtggtggtggaagatcacagtcgcaac
gacctgcaggagttcctgcgcagtcagctgaacagggctgaggctcacgccggtgtacgg
cttccaagcgagtacgctgtggtgcccttcgagagctttaccctacagcgagtctaccag
ctcgagatggggttgacaagacacccagaggagaagcccgtgcggaaggaccgcagggac
gagctggctgaggtggtggagagtgcgctacacgctctaaatgtgccaagtcgggcagga
gaaaaaacaaaagcgtccaaagtctacacaccgtcagactttgtagaagggatcacacga
accgagaaggacaagggcacgctgtatgaactgaccttccgcggtgaacagaagcaagag
tttcgcaggctggttctcttccggcccttcggcccactcatgaaagtgaagagtgagctc
gtggagacgaccaacatgcccattaacatcgtggtgcctttgtcccaaagagccgacaaa
ttcagacagtttatgcacaacttcagggaggtgtgcgtgaagcaggacgggcgggtgcac
cttaccgtggtttactttggaaaggaccagataaatgaagtcaagggaactttggagaac
acatcgagggagatgaacttccgtaacttcaccctgattcagctgaatgaggagttttct
agaggtcgaggtctggacgtgggagcccgagcttggaagggaggcaatgtcctgctcttc
ttctgtgatgtggacatcttcttcacagccgacttcctaaacacatgtcgtctgaatgcc
caacctggaaagaaagtgttttacccagttctcttcagtcagtacaatccggctgtaatc
tacggcagccacattccccctgtggaacagcagctgattattaagaaagacactggcttc
tggagggactttggctttgggatgacctgtcaatacagatcagactttatcaatataggt
ggttttgacgtggacattaaaggctggggcggtgaggacgtccacctgtacaggaaatac
ctccacagtaatctactggttgtacgtacaccatcccgcggcctcttccatctgtggcac
gagaagagatgtgccgatgagttgcctccagaccagtacaagatgtgcatgcagtcgaaa
gcaatgaacgaggcctcgcatggacagcttggcatgctgttgttccggcatgagatcgag
gcgcacctccgaaaacagaaacagcgaagcggagccaaaaaagcttga
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