Triplophysa dalaica: 130412042
Help
Entry
130412042 CDS
T09616
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tdw
Triplophysa dalaica
Pathway
tdw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130412042 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130412042 (rabgef1)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130412042 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
130412042 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
130412042
NCBI-ProteinID:
XP_056593111
LinkDB
All DBs
Position
22:complement(14349027..14355807)
Genome browser
AA seq
502 aa
AA seq
DB search
MSQRTERRGIHVDQSELLCKKGCGYFGNAAWQGLCSKCWREEYQKARQRQIQEDWALAEK
LQREEEAAYVSTHGSSQTQPPHSHSQPSLATFSKFEEKKTNEKTRKVTTVKKFFSPSSRT
APKKESHEGKTPSPSITRQSSIETDRVSRDFMDFLKTLQKHAGKEIHKQSRAFIDSMGNK
RDLGVEELSECAQDFYQNISDRLMNHYKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETTD
DEKKDLATQHRIRALHWVTIQMLCVPVDEEIPEVSDSVVKAITDIIEMDSKRVPRDKLAC
ITSCSKHIFNAIRVTKNEPASADDFLPTLIFIVLKANPPRLQSNIQYITRFCIPSRLMTG
EDGYYFTNLCCAVAFIEKLDAQSLNLSPEDFERYMSGQASPQRPDDPAAWPQTGSNINPV
VSQIHQNQSILSNLEKRQQQVIEVANSLQTELAEWQDSVAREVQQILERYPLEIKPRASA
IDAENVENDRLPPPLQPQVFAG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgcactgaacgaagggggatccatgtggatcaatcagaattgctgtgcaag
aagggctgcggttactttgggaatgcggcgtggcagggtctgtgctccaagtgctggaga
gaggagtaccagaaagctcggcagaggcagatccaggaggactgggccctggctgaaaag
ctccagagggaagaggaggcagcgtatgtcagcactcacggctcctctcaaacccagcct
ccgcattctcactcccagccctctctcgccaccttctctaagttcgaggagaagaaaacc
aacgagaaaactcgcaaagtcaccactgtgaagaagttcttcagtccctcttcccgcaca
gcacctaaaaaagagagccatgagggaaagactccaagcccctccatcacccgtcagtcc
agcatcgagaccgatcgcgtgtcacgagactttatggacttcctgaagacattgcagaag
catgccggcaaagagatccacaagcagagccgtgcttttatagacagcatgggaaataaa
agggatcttggcgtagaggagttatcagagtgcgctcaggacttctaccaaaacatctcg
gaccgtctcatgaatcattataaaggttcctctgaaaaggtggacagggtgatggaccag
gtggaaaaatacatcatgactcgactgtataaaagcgtcttctgtccagagactactgat
gatgagaaaaaagacctggccacccagcacaggattcgggcgttgcactgggtaaccatt
cagatgctgtgtgttcctgtggatgaagagatccctgaggtgtctgatagtgtggtcaaa
gctatcacagatatcattgagatggactcaaagcgtgtgccgagggataagctggcctgc
attaccagctgcagtaagcatatcttcaacgccatcagggttactaagaatgaaccagcc
tctgcagatgacttcctgcctaccctcatctttatcgtgttgaaggccaatccaccccgg
ctgcagtcaaacatccagtacatcacacgcttctgcatcccctcgagacttatgacggga
gaggatggatactactttaccaacttgtgctgtgctgttgccttcatagagaaactggac
gcccagtcattgaatcttagccctgaggactttgagcgctacatgtccggtcaggcttcc
cctcaaaggccagatgatccagcagcctggccccagaccggctccaatattaaccctgtg
gttagccagatccatcaaaatcaaagcatcctatccaacctagaaaaaagacagcagcag
gtcatagaggtggcaaacagcctccagaccgaactggcagaatggcaggacagcgtggcc
cgtgaggtccagcagatcttggagagatacccattggaaatcaaaccacgagcatctgcg
attgatgcagaaaatgtggaaaacgacaggttaccaccccctctgcagccccaagtgttt
gctggatag
DBGET
integrated database retrieval system