Triplophysa dalaica: 130412051
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Entry
130412051 CDS
T09616
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130412051 (rnf34b)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130412051 (rnf34b)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130412051 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
ARMET_C
FYVE_CARP1-2
SAP
HeH
Prok-RING_4
zf-C3HC4_2
FYVE
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130412051
NCBI-ProteinID:
XP_056593134
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All DBs
Position
22:complement(19061455..19079897)
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AA seq
398 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGAVRTQQPGFGAGAGPFRFAPSAGYSTYPPASTTSGSI
GLACKSCGLAFSVFRRKHVCLDCKKSYCSLCSVLQENLRRCATCHLLWSTAFQRPRLMRL
RVKDLRQYLMLRNINTDTCREKQDLVDLVLCHLGAELEMGEDEEEEEEAEAEADTDSLHS
LPRSLSTPSAPAARSASQQSALSGIASQGEALSHSDSSGTTSQDHGDAASVSLLNLEPHE
DILEASPATQRRARASLSDLAHEADIESLTVRQLKEILARNFVNYSGCCEKWELVERVHR
LYRDNEHNRRSMENVSNSQSAVIAYPPSICNGGIGDGVPVAQLGGVDENLCRICMDAVID
CVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcctcctccatgtgggcgtcatgttgcgggctgttgaatgaggtgatg
ggcaccggggctgtccgcacccagcagccaggctttggagctggagccgggccgttccgc
ttcgcccccagcgctggatactccacctacccccccgccagcaccacctcaggaagcata
ggcctggcgtgcaaatcttgtggacttgccttctcggtgttccgacgaaagcacgtttgc
ctggactgtaagaagagctactgctcgctgtgctccgtgctgcaggagaacctgcgccgc
tgtgccacctgtcacctgctgtggagcacggccttccagcggccgcggttaatgcgactc
cgtgtcaaagacctgcggcagtacctcatgctgcgaaacatcaacaccgacacatgcagg
gagaaacaggacctggtggacctcgtgctctgtcatctgggtgccgaactggagatgggg
gaagatgaggaagaagaggaggaagcagaagcagaggcggacacggacagcctgcactct
ctcccgcggtcgctctccaccccatctgcccctgcggcgcggtccgcctcgcaacagtcg
gcgctgtctggaatcgcctctcagggagaagctctaagtcacagcgatagctcagggaca
accagtcaggaccatggagatgctgcatcggtttctcttctaaacctggaacctcatgaa
gacatactagaggcgagtccagcgacacagagacgggcgcgtgcctccctctcagatctg
gctcatgaagccgacatcgagagtctgacggtacggcagctgaaggagatcctggcacga
aacttcgtcaactattcaggttgctgtgagaagtgggagctggtagaacgcgtgcatcga
ctctacagagacaacgaacacaacagaagatcaatggaaaatgttagcaacagccaatct
gcagtcatagcctatcctccctctatatgcaatggagggattggagatggtgtgccagtg
gctcagctgggcggcgttgatgagaacctgtgtcggatctgcatggatgcggtgatagac
tgcgtcctgctggagtgcggtcacatggtcacctgcaccaagtgcggtaagaggatgaac
gagtgccccatctgcaggcagtacgtggtgcgggcggttcacgtcttcaagtcataa
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