Triplophysa dalaica: 130412124
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Entry
130412124 CDS
T09616
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130412124 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130412124 (exosc8)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130412124 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
130412124
NCBI-ProteinID:
XP_056593242
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All DBs
Position
22:15020084..15022284
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNINSINTANGSAMVKIGNTTVIC
GLKAELTMPPSDAPNEGYIVPNIDLPPLCSSRFRTGPPGEQAQAASQFIADVIESSDLIN
MEELCIEKAKLCWVLYCDMMCLDYDGNLLDTCIIALLAALKNAQLPEVTINKETDLAEVD
MKKKKHLKINRHPVGASFAVFDDTITIVDPTAEEESLSTALLTVVTDEEDRLCAVHKPGG
TSLSAEKLQHCINRAVTRNKEINKLLNKVMDSMKTSK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaaccgcagagcctcttgaatatcacaggagctttttgaaagaa
aactgtcgtccagatgggagagaattgggggagtttagacccacaacgttaaacattaat
tctataaatacagctaatggatcagcaatggtgaaaatcgggaataccacagtaatctgc
ggattaaaagctgaattgacaatgcccccctctgatgctccaaatgaaggctatatagtt
ccaaatatagatctgccacccctgtgctcatctagattcagaaccggtccaccaggagaa
caggctcaagcagccagccagtttatcgctgatgttattgagagttcagatttaataaat
atggaagaattgtgcattgaaaaagcaaagctttgttgggtgctgtactgtgatatgatg
tgtttggattatgatgggaacttacttgacacctgcatcatagctctgctggcagcttta
aagaacgctcaactccctgaagtcacgataaacaaagaaacagatttagcagaagttgac
atgaagaaaaagaaacatttgaagatcaaccggcaccccgttggagcatcatttgcagta
tttgacgataccatcaccatcgtagacccaacagcagaagaggaaagcttgtctacagca
ttattaactgtagtaacagatgaagaggatcgcctgtgtgcagtccataaaccaggaggg
acttcactatctgctgagaaactgcagcactgtataaatcgcgccgttacaagaaacaaa
gaaatcaacaaactcctgaacaaagtgatggatagcatgaagacgtcaaaataa
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