Triplophysa dalaica: 130412291
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Entry
130412291 CDS
T09616
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130412291 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130412291 (xrcc4)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130412291 (xrcc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
KASH_CCD
PK_Tyr_Ser-Thr
XLF
Motif
Other DBs
NCBI-GeneID:
130412291
NCBI-ProteinID:
XP_056593508
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All DBs
Position
22:complement(19960899..19982823)
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AA seq
345 aa
AA seq
DB search
MRSSSSVRQISITSEAQRSFFLKVEWAEDLGSGFIVLLSDGVSAWSGEVSEEDVSREARD
IEMERERYVQDLHLALTGEGQTAEGVYAFHLAPVRPSSPLLQLSYEKVQSDISFRLGVVE
LQAVPEPSEVIRELITHSLDLSKHLEAKNQHLLEENHKLRQEQHHISTQMERYVEEKERL
ERELYGRFVLVLNEKKGKIRDLQAGLDELQQSVDEDEVRRKQEKSEEPEAEKSSGQEGDY
DGSTEEEQEEDHTRPERSAPPKEMSENSPMDESLNDITDVAPCRKRRHRHLQQPESEAKR
AALPHRSRAKPTEEAKAESSRTPNVQQRPAAATAVPDPDDLFEDF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcagtagcagtgtgcgtcagatctccatcacgtctgaggctcagcgttcattc
tttctcaaggtggaatgggccgaggatctcgggtctggatttattgttcttctgtctgac
ggcgtgtctgcctggagcggtgaggtctcagaggaggacgtgtctcgggaagctcgtgac
atagagatggagcgggagaggtatgttcaggatctacacctggctctcaccggagaggga
cagacggcggagggggtgtacgcttttcacctggcacccgtgagaccctctagccccctg
ctgcagctgtcttatgagaaggtgcagagcgacatctcgttcaggctcggtgtggtggag
ctgcaggccgtgccggagccctctgaagtcatcagggagctcattactcacagcctggac
ctcagcaaacatctggaggccaaaaaccagcacctgctcgaggagaaccacaaactgaga
caagaacaacaccacatcagcacacagatggaaagatacgtggaggagaaagagcgacta
gagagagagctgtacggccgctttgtgttggttctgaatgagaagaagggtaaaatcaga
gatcttcaggccggactggatgaacttcagcagtctgtggatgaagatgaagtgagaagg
aaacaggagaaaagtgaagagccggaggctgagaagagttcaggacaggagggtgattat
gatggaagtacagaagaagaacaggaggaagatcacacacgtcctgagcggagcgctcct
cctaaagagatgtcagaaaacagcccgatggatgaaagtctgaatgacatcacagatgtg
gctccctgtcgcaaacgacgtcatcgacatcttcaacagccggagtctgaagctaaaaga
gcagcgctgccccacagatccagagcgaagccgacagaagaggccaaagcagaaagcagc
agaactccaaatgtccaacagagaccagccgcggccacagccgttcctgatccagatgac
ctgtttgaggatttctga
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