Triplophysa dalaica: 130412342
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Entry
130412342 CDS
T09616
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130412342 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130412342 (fip1l1b)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130412342 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
130412342
NCBI-ProteinID:
XP_056593531
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Position
2:complement(22773797..22780610)
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AA seq
563 aa
AA seq
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MSAEETDTTATTDANAGDEEEEWLYGDEGESKETEEEEAKLTAAISGGGAASAPSDSEEV
PANSVTTPTTTGNGVDSQETSQTPEETPGDDEDSDSDSDDDDDDVRVTIGDIKTGAPQYT
AYAAPVNLNIKTAGRAYGAVGSKVKGVDLDAPGSINGVPVQEVDMESFEEKPWRKPGADL
SDYFNYGFNEETWKAYCEKQKRLRMGLDVPSMGSTTSKISVQQGRTGNTEKEITIQAHTS
KTDFCSPSTMYKTGLNQSRISPPHWAGPAPQEMSYYSKPSGTIDVIGGQTATISRVEGRR
RHNLEGNNIQVISDHTTTEAEPTVVKMPPPFFPPGHPPPNMPPPPFLPPPVSQAPPLIPP
PRMPITVPPPNFPPPTGGPPPSLIPTLDNSGHPGGYDGRPVPHFPFPTGGFPPPMQGAVN
PWPGMMDNSKPWDYYPRRDKEREKERERERPRERVHDREHSPSSVAYNSDEERYRYREYG
DRGYERHRERSSREKEERHRERRHREKEEGRHKSSRSSSRRRHDSEEGDSHRRHKHKKSK
RSKEGKEPSEERPGDQENQETME
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaggagacggatacaacagccaccactgatgcgaatgcaggggacgaggag
gaggaatggctttacggggatgaaggtgaaagcaaagaaactgaagaagaggaggccaaa
cttacagcggccattagtggtggtggagccgcctctgctccttctgacagcgaggaggtc
cccgccaacagcgtcaccaccccgaccaccactggaaatggagtggacagtcaggaaacc
agccagacccctgaggaaacacctggagatgacgaagacagtgatagtgacagcgatgac
gatgatgatgatgtacgcgtcacaatcggagatatcaaaaccggagcgccacagtacacg
gcatatgcagctccagtgaatctgaatataaaaacagctggcagagcatatggagcagta
ggtagtaaggtgaaaggtgtcgaccttgatgctccgggcagcatcaatggagttccagtc
caggaagtggacatggagtcctttgaggagaaaccatggagaaaaccaggtgcggacttg
tctgactattttaactacggttttaatgaggaaacatggaaagcgtactgtgaaaagcag
aagagattacggatgggcctcgacgttcccagcatggggtccactaccagcaagatctca
gttcagcagggtcgcacaggtaacactgagaaagagatcacaatacaggctcatacgtct
aaaaccgacttctgctctccgtccacaatgtataaaacaggactcaatcaatccaggata
tcccctccacattgggcggggcctgctcctcaagaaatgtcctattattcgaagccgagc
gggaccatagatgtgatcggtggacagactgcaaccattagcagagtggaaggacgacgt
cgccacaatctggagggtaataacatccaggtgatctctgaccacacgaccacagaggca
gaacccacagtggttaagatgcctcctcctttctttccccctgggcatcccccccccaac
atgccaccacctccattcctccctcctcctgttagtcaggctccgcctctaatcccgcct
ccacggatgccaatcacagttcctccacccaatttcccccctcccacaggtggaccccca
ccatcacttattcctactttggacaacagtggacatccaggaggatatgacggacgtcct
gtccctcacttcccatttcctacaggtgggttcccgccaccaatgcaaggagctgttaac
ccctggcctggtatgatggacaactcaaagccgtgggactactaccctagacgagacaaa
gagagggagaaagaacgggagcgggagagaccgagggaacgagtccacgacagagaacat
agtccctcctctgtggcttataacagtgatgaagagcggtatcgttaccgtgaatacggg
gacagagggtacgagaggcatcgggagcgatcgagccgtgaaaaggaagagcgtcatagg
gagagacgacacagagagaaagaagagggtagacacaagtcgtcacggagcagtagcagg
agaagacatgacagtgaagaaggcgacagtcaccggcgccacaagcacaagaagtccaag
aggagcaaggagggcaaggagcccagcgaggaacgtcctggtgatcaggagaaccaggag
accatggagtaa
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