Triplophysa dalaica: 130412897
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Entry
130412897 CDS
T09616
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130412897 (ift140)
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
130412897 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_HPS5
ANAPC4_WD40
TPR_COPA_B
WDR55
TPR_GEMI5
TPR_IFT80_172
tRNA_int_end_N2
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
130412897
NCBI-ProteinID:
XP_056593666
LinkDB
All DBs
Position
23:17225916..17251168
Genome browser
AA seq
1458 aa
AA seq
DB search
MAVYFDHRIEAPDSSGEAVLIAWHSSLCVLAVGSVNASTGGSVDLYLQQGEHVKLCHLER
GFSPSLLQWHPTKPLLVVGWETGETLLLSHPSGEQTPLPANTHASCITLLEWSSNGSRLV
TGDQAGVMAVWRVDARGKLQGSPLLKHDYGKPLTCCMFRPAPPAEDVAMLARAAVSGDET
ALDMFNWKKTNKGGGFMLGSQEGLSFYISTADGNVFSVDDQARSAALLSMESAVQKMWYS
KRRAVLAVVTDSLLLSQFSVGPEGFTQEISKVKLSGRGGQHTDIVWTEDGLLITASGEQH
IRLWDVELDDHYALSLDESLGFEKGELLNCVSFCAFKNALAAGTSRGRVALWHMVTVNDQ
KGDTKTHWKLQTPAEVEGNISQLQWGSSSHLLAVRSSSCVLILSEHVMCSHYSQQVAAVQ
LAPAQLSLANFNTNTHITFHTDTHIRAVQVTRDMVTVWNGKYITVYESSGQTLHSTGSFQ
CDSPALAVHEENIYTIEPNRVQIRTPQGTVKQLLVFSEAEGNPTLLSVCGSYLAVGTDTS
HVRVFDLTRREAKPVSITKNLAELIPDVGALRSVKCNASGSQMSVLITQVNGRPDNKVYF
YDIELDTLSYFDFFTGRPASSLTQLEDSQRTRCEGELSTRCPISQFWDENEPRLFVCATV
PVKFDLNSSSQSQAEKEDVLVVTFFVTQEHGLLLQDSQPKPGTLLSLLALDTPYYYYICK
ILFRRGGVFLPDLGESGEQGEVVSTPSQVSSTPQMVVRRALRDFVGLEGCEKPTRDAMLN
FSFYLTIGDMDEAFKAIKLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALRD
AEKEPEVDAQVAVLATQLGMLEDAERLYKSCGRFDLLNKFYQAAGQWQQAIETAETHDRI
HLRTTYYSYAKHLEATGDKSLSLQYYEKSDTHRFEVPRMLMDDNVSLEVYINKMKDKDLY
KWWGHYLESQSDMEAALHYYDLAQDYLSQVRVHCYLGNIQKASVIANETGNRAASYHVAR
QYEGQDEISQSVHFYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEKS
THMDRAVMLYHKAGHVSKALELAFATEQFGALQLIAEDLNDKSDPALLTRCSDFFIKHAQ
YQKAVELLVTAKKYNEALQLCLDQSLTITDDLAESLTVPRDSAYLSESGRKELLEKIADC
CMRQGNYHLATKKYTQAGNKIKAMRALLKSGDTEKIIFFAGVSRQKEIYIMAANYLQSLD
WRNDAEIMKNIIGFYSKGRALDLLAGFYEACSEVEIDDYQNYEKAYGALTEACKCLSKTK
GRSGDETDTRILVLTHRLDLIKRFIQSQRMHKEDPGEAVRICESLLEEKDLDPAVRVGDV
YAFLVEHYCQHGNFQQAWSKLEDLRSARPNINLSLYVSQSSLQALQDAAGIRLPYGDTTN
KHAGEDDEEVEEDENINH
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtactttgatcatcgtatcgaggcccctgacagcagtggggaggcagttctc
atcgcatggcactctagtctctgtgtgctggccgtgggctctgtaaacgcctccaccgga
ggtagtgtggatctgtacctgcaacagggtgagcatgtgaagttgtgtcatttggaacgt
ggtttcagcccctcgctgcttcagtggcaccccactaaacccttgctggtggtgggctgg
gagacgggcgagacgttgctcctctcacacccgtctggtgaacaaacacccctgccagca
aacacacacgcctcctgcatcacactactggagtggagcagtaatggcagcaggctggtc
acgggagatcaggcgggtgtgatggcagtatggagggtggacgctcgaggtaaactgcag
ggatctcctctattaaaacacgactacggcaaaccactgacatgctgcatgttcagacct
gccccacctgcagaggatgtggcgatgttggcacgagcagctgtcagcggagatgaaacc
gccctggacatgttcaactggaaaaagaccaataaaggaggcggtttcatgcttggttca
caggaaggcctgtcgttttacatcagcacagcggatgggaatgtgttcagcgtggatgat
caagcgcggagtgccgcgctgctgtctatggagagtgcggtacagaagatgtggtattct
aaaaggagagccgtgctcgctgtggtaacggactcactgctgctgtctcagttcagtgtc
gggccggagggattcactcaggagatcagtaaggtgaagctcagtggtagaggtgggcag
cacacagacattgtgtggacagaagacggtttattgatcacagcatccggggaacagcac
atcagactctgggatgtggagttagatgatcactacgctctgtctttggatgagtctctg
ggctttgagaagggagaactgctcaactgtgtgtctttttgcgcgtttaaaaacgctctg
gcagcaggtaccagcaggggtcgtgtggctctgtggcacatggtgacggtgaatgatcag
aaaggagacacaaaaacacactggaaactccaaacacccgcagaagttgaaggaaacatc
tcacagctgcagtggggttcgagctctcatctgttggcggtgcgcagcagcagttgtgtg
ttgattctctccgagcatgtgatgtgttctcactacagtcagcaggtggcagcggtgcag
ctcgcaccagcacagcttagcctggccaacttcaacaccaacacacacatcacctttcac
acagacacacacatcagagctgtgcaggttaccagggatatggtcaccgtgtggaacggg
aaatatatcactgtgtatgagtcatcaggtcaaactctccacagcacaggtagtttccag
tgtgattctcctgctctcgctgtacatgaggagaacatttatactatagaacctaaccgt
gtccagatccggacaccacagggtactgtgaagcagttgctggtgttctctgaagcagag
ggaaatcccacactgctgagtgtgtgtggatcttacctggctgtcgggacagacacgtca
catgtcagagtgtttgacctcacacgcagagaagccaaacctgtgagcatcactaaaaac
ctggctgagctcattcctgatgtaggcgccctgagatctgtcaaatgcaatgctagcggc
agtcagatgagcgtcctcattacacaggttaatggacggccagacaacaaagtgtatttc
tatgatatcgagctggacaccctgtcttattttgacttcttcactgggcgaccagcgagc
agtctcacacagttagaggacagtcagagaacgcgatgtgagggagagttatccacacgc
tgtcctatatctcaattctgggacgagaatgagccacggctgttcgtgtgtgcaacagtt
cctgtaaagtttgacctcaacagcagcagccaatcacaagcggagaaggaagacgtgtta
gtggtgacgttctttgtgacacaggaacacggtctcctcctgcaggattcacagcctaaa
ccaggcacactcctgtctctgctcgctcttgatacaccctattattattatatctgcaag
atcttatttcggaggggaggagtttttcttcctgatctgggtgagagtggagaacagggt
gaggtggtctctacgccctcccaggtgtcctccacacctcagatggtggtgcgacgagcc
ctccgagattttgttgggttggagggctgcgagaaacccaccagagatgccatgctgaac
tttagcttctacctcaccattggagacatggacgaagcattcaaagccatcaaactcatc
aagagcgaggctgtgtgggagaacatggcacggatgtgtgtgaagagtcgtcggctggac
gtggcacgcgtgtgtctggggaacatggggaatgctcgggccgctcgagctctcagagac
gcggagaaagagccagaggtggatgcacaggtggcagtgctagctacacaacttggcatg
ctggaggatgcagaacgcttgtataagtcatgtggcaggtttgatttgctgaataagttc
tatcaagcagccggccaatggcagcaggcgatcgaaacggcggagacgcacgaccgcatt
cacctccgcacaacttactacagctatgcaaaacacctggaagccaccggagacaagagt
ctctcactacagtattatgagaagtccgacacacaccgattcgaagttccaaggatgtta
atggatgataatgtttcgttggaggtctacatcaataaaatgaaagacaaggatttgtat
aagtggtggggacattatctggagagccaatcagacatggaggcagcgttgcattactac
gacctcgctcaggactatctgtctcaagtgcgcgttcactgttatctagggaacattcaa
aaggcgagtgttatagccaatgagactggcaatagagcagcatcctatcatgttgcacgg
cagtatgaaggacaggacgaaatcagccaatcggtgcacttttacacacgagcgcaggcc
tataacaatgccatccgactgtgtaaagagaacaacttggatgagcagctcatgaatctg
gcgttgctcagtaatccagaggatatgatggacacggcaatgtactatgaagagaaatca
acacacatggacagagccgttatgctttatcataaggcaggtcatgtgtcgaaggctttg
gaactggcttttgccacagagcagtttggagctttacagctgatcgcagaggatctgaat
gataaaagtgatcctgctttactcacacgctgctctgatttcttcattaaacacgctcag
taccagaaagctgtggaattactggtgaccgccaaaaagtacaatgaggcgctccagttg
tgtctggaccagagtttgaccatcacagacgatctggctgaaagtctgactgtgccgcgt
gactccgcctatctgtcagagtctggacgcaaggaattgttggagaagatcgccgactgt
tgtatgcgacagggcaactaccatctagcaacgaagaaatacacacaggctggaaacaaa
atcaaggcgatgcgagcgctgttgaaatccggtgacacagagaaaatcatattttttgca
ggtgtttcaagacagaaggaaatatacatcatggcggcaaactacctgcagtctctggac
tggaggaatgatgctgagatcatgaagaacattattggcttctactccaaaggacgtgcc
ctcgacctgctcgccggcttctacgaggcctgttcagaggttgaaatcgatgattatcag
aattatgagaaggcgtacggagctctgaccgaagcttgtaagtgtttgtcaaaaacaaag
ggtcgcagtggagatgagactgacaccaggattcttgtactgacacacagactcgacctt
atcaagagattcattcaatcacagagaatgcataaggaggatccaggggaagcagtgcgt
atatgcgagtctctgctggaagagaaagatctggaccctgcagtgcgtgtgggtgacgtg
tatgccttcttagtggaacactactgccaacatggcaacttccaacaggcgtggagtaaa
ctagaggatctccgatcagcacgtcccaatataaatctcagtttatatgtgagtcaaagc
agcctgcaagcgctacaggacgccgctggaatccgtctgccctacggagacaccacaaat
aaacatgctggtgaagatgacgaagaggtggaggaagatgagaacatcaatcactga
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integrated database retrieval system
