Triplophysa dalaica: 130413089
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Entry
130413089 CDS
T09616
Name
(RefSeq) guanine nucleotide exchange factor VAV3
KO
K05730
guanine nucleotide exchange factor VAV
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130413089
09142 Cell motility
04810 Regulation of actin cytoskeleton
130413089
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
SRA1
Phasin
NTP_transf_6
SH2_1
zf-RING-like
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130413089
NCBI-ProteinID:
XP_056594021
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Position
23:complement(4381567..4442928)
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AA seq
830 aa
AA seq
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MEHWKQCALWLINCKVLPANHRVTWESAQVFDLAQTLRDGVLLCQLLNNLRPQSINLREI
NLRPQMSQFLCLKNIRTFSQSCSEIFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSHTHI
AQQTGIRPFPTEESVEDEDIYNHLEDLIDENGVEDEEDLYDCVYDDDEGGEVYEDLMKVE
LVQPQKQVETDVRSCCLMEIKQTEEKYTETLDSIEKFFMKPLGQSLSSLEIAKVFINIPD
LVKVHMSLLKEVQDSVVHHNASNLHQIFIKYKERLVLYGKYCSQVESSIACLDEICKNRE
DVRQMLELCSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDATDKTNLREALDA
MKDLAQYVNEVKRDIETQRDIDQYQKSIENLNQSLRIYGRPKGDSEVRIATVDKRAKQDR
HIFLFDAAVIVCKRKGDNYEMKEVIDLHLFKITNNPTSDRENRKWSHGFYLTHNQGQTGF
EFFFKTKEVKKKWLEQFGMALSNICPESGKSNFHEFRMHTFETTTSCSSCKMLLRGVFYQ
GYRCSKCGVGAHKECLGRVDVCVKSTDSGSFGQQAGKAAKCGGDAGLPKMLVIRNYYGVP
SPLCGPPLNIQVGDVIELVEANIRSSWWKGKVLATKEIGFFPSDAVKPCPCVPKPVDYSS
QPWFAGPMERLQAEATLLNRISSTYLVRHRSRELNEYAISIKYNNDVKHIKILAKEGCFH
ITENRKFRSILELIEYYKHHSLREGFRTLDTTLQFAYREPENGANMFTPKVMGVAIARYD
FSSRDTRELSLQEGDVVKIYSKTAANGWWRGEVNGRVGLFPSTYVEEGEE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggagcattggaaacagtgcgcgttatggctgatcaattgtaaggtgctcccggcgaac
catcgggtgacatgggagtccgcccaggtgttcgatctggcgcagaccctgcgcgatggg
gtcctcctgtgccagcttctcaacaacctgagaccccagtccatcaacctgagggaaatc
aacctgagacctcaaatgtcacagtttctctgcttgaagaacatcaggaccttttcacag
tcctgctcggagatctttggcatgaagaaaagcgaactgtttgaggcctttgatttgttt
gacgttcgagatttcggaaaggttatggacacattgtccaagctctcacatacgcatatt
gcacaacaaactggaataaggccgtttccaacagaagagagtgttgaagacgaggacatt
tataaccatcttgaggatctgatagatgaaaatggcgtcgaagatgaggaggatctatac
gactgtgtgtacgacgatgatgaaggtggagaggtgtatgaagacttgatgaaggttgag
ctggttcagccacagaaacaggtagaaacagacgtcaggagctgctgcctaatggaaatc
aaacagacggaggagaaatatacagagactttggactcgatagagaaattttttatgaag
cctttgggacagtcgctttccagcctggagatcgcaaaagtattcatcaatattccagac
cttgtaaaagtgcacatgagccttctgaaggaggtccaggattctgttgttcatcataac
gccagtaacctgcaccagatctttatcaaatacaaagagagattagtcctgtatgggaaa
tactgcagtcaagtagaatcgtccattgcgtgtttggacgagatctgtaagaacagggag
gatgtcaggcagatgttagaattatgctccaagcgtgccaacaatggaaagtttacactg
cgagatctactggttgttccaatgcagagagttcttaaatatcatctgcttctacaggaa
ctggtaaaacacacccatgatgccacagacaagactaatttacgtgaagctctggacgcc
atgaaggacctggcccagtatgtcaatgaggtcaagagagacatcgaaactcagcgggat
atcgaccagtatcagaaatctatagaaaaccttaatcagtctctccgtatctacgggcga
ccgaaaggtgacagcgaagtgcgaatagctacagtcgacaagcgagccaaacaggacagg
cacatctttctatttgacgccgcagtcatcgtatgcaaacgcaagggggacaactatgaa
atgaaggaggtcatcgatctccacttattcaagatcaccaacaacccgacctcagacaga
gagaatcgaaagtggtctcatggattctacctcacacacaaccaggggcaaaccgggttt
gagttcttcttcaaaaccaaagaggtcaagaaaaaatggttggaacagtttggcatggca
ctatcgaacatttgtccagagagtgggaaaagtaatttccatgagttccgcatgcacacc
ttcgagacgaccacatcctgcagctcgtgtaaaatgctgttgagaggggtcttttatcaa
gggtaccgctgctccaaatgtggcgtcggcgcccacaaggagtgtctcggcagagtggat
gtctgcgtcaaaagcactgattccggctcctttggacaacaggctggtaaagctgccaaa
tgtggaggagatgcaggtttgcccaagatgttggttattcggaattattatggagtcccc
agccccctgtgcggcccacccctcaacatccaagttggtgatgtcatcgaactggtcgaa
gcgaacatccggagcagctggtggaagggtaaagtcctggcaactaaggagattggcttc
tttccaagcgacgcagtgaagccttgcccatgtgttcccaaaccggtcgattactcttca
cagccatggtttgccggacctatggagaggctgcaggcggaggctacgctgcttaacagg
ataagcagcacatatctggtccgtcacaggagcagagagttgaatgaatacgccatcagc
atcaagtacaacaacgacgtgaaacacatcaagatcttagcaaaggagggatgcttccac
attaccgaaaacaggaagttcagaagcattttagagctgatcgagtattacaaacatcat
tctctgcgggagggattcaggacactcgataccacgctgcagttcgcctaccgagagccg
gagaacggagccaacatgttcactcctaaggtgatgggtgttgcaatagcccgttacgac
ttcagctccagggacactcgagagctgtcgctgcaggagggcgatgtggttaagatctac
agcaaaacagcagccaacggctggtggagaggagaagtcaatgggcgggtgggcttgttc
ccttccacctacgtagaagaaggagaggaatga
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