KEGG   Triplophysa dalaica: 130413097
Entry
130413097         CDS       T09616                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
tdw  Triplophysa dalaica
Pathway
tdw03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    130413097 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130413097 (wdr48a)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     130413097 (wdr48a)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WD_LRWD1 WDR54 WD40_RFWD3 Nucleoporin_N RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 130413097
NCBI-ProteinID: XP_056594036
LinkDB
Position
23:complement(19181163..19192083)
AA seq 684 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTNVCLSASASSLSGNKDSIYS
LAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGT
IRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEE
KAPVLKMELDRSAEPHSAIWVSTTKSTVNKWSLKGIHNFRTSGDYDNDCSTPLTPLCTQP
EHVIKGGASIIQCHILNDKRHILTKDTNNSVAYWDVLKACKVEDLGKTEFDEEIKKRFKM
VYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEF
WPRTHINPMDEDTELNHTSVNGEHESRTQKGNGYFQVPAHTPVIFGEAGGRTLFRLLCRD
SGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQ
VRKVMEHVYEKIINLDSESQTGGSTAEKPSEQKEEEDVSVLAEEKIELLCQDQVLDPNMD
LRTVKHFIWKSGGDLTLHYRQKST
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatatgtg
atcagagatgaagtggagaaatataatcgtaatggagtcaacgcgctacagctggatccg
gctcttaaccgtctcttcaccgctggacgagactccatcatcagaatatggagcgttaac
cagcacaagcaggatccgtacatcgcgtcaatggagcatcacacagactgggtgaatgat
atcgtcctctgctgtaatggaaaaacattgatatcagcgtcctcggacactacagtgaag
gtttggaacgcacacaagggcttctgcatgtcaacgctgagaacacacaaggattatgtg
aaagcgctagcctatgctaaagataaagagctggtggcgtcggcagggctggaccgtcag
atcttcctgtgggatgtgaacacgctcacagctcttactgcctcaaataacactgtcacc
aacgtgtgtttgtctgcttcagcgtcgtctctcagcgggaacaaagactccatctatagt
ttggccatgaatcagatggggactgttatcgtgtcgggatccactgaaaaggtgctgaga
gtgtgggatccacggacctgtgccaaactgatgaagctgaagggacacacggacaatgtg
aaatccctgctgttaaacagagacggcactcagtgtctttcaggaagttcagacgggacc
attcggctctggtcactgggtcagcagaggtgtatcgccacgtaccgcgttcacgatgag
ggcgtctgggcgctgcaggtcaacgaagccttcacgcacgtctactccggaggtcgtgac
cgtaagatatactgcacagacctgcgcaacccggacattcgtgtgctcatatgtgaagag
aaagcacccgtgttgaagatggagttggacaggtcagctgaaccacattctgccatctgg
gtttccaccaccaagtctacagttaataaatggtctctgaaggggattcataatttccga
acgtcgggggattatgacaatgactgcagtactccactgacacccctgtgcacacagcct
gagcatgttatcaaaggtggagccagtataattcagtgccacattctgaatgacaagaga
cacattctcaccaaagacaccaataacagcgtggcatactgggatgtgctgaaggcgtgt
aaagttgaagacttgggtaagacagagtttgatgaagaaatcaaaaaaagatttaagatg
gtttatgtgccaaactggttttcagtggatctcaaaacagggatgctgactataacatta
gatgagagcgactgtttcgccgcctgggtttcggctaaagacgcgggattcacaagtcct
gacggatcagaccccaaactgaatcttggcggtctgctgcttcaggctctgttggagttt
tggccgcgcacacacatcaatccaatggatgaggacacagaactgaatcacaccagtgtg
aacggtgaacacgagagcaggacacagaaaggtaacggatatttccaggttccagcacac
acgccagtcatcttcggtgaggcgggaggcagaacgttattccggctgttgtgtcgtgac
tcgggaggtgagacggagtccatgttactgaacgagaccgtcccgcagtgggtcatcgac
atcacagtggataaaaacatgcccaaattcaacaaaatccccttctacctccagcctcac
tcatcatctggagcaaagacattaaagaaggataggctgtctgccagtgacatgttacag
gtgaggaaggtgatggaacacgtctacgagaagatcattaatctggacagcgagtcacag
acgggcggatcgaccgcagagaaacccagcgagcagaaggaggaggaagacgtctcggtt
ctcgcagaagagaaaattgagctgctctgtcaagatcaggttttggaccccaacatggac
ctaaggacggtgaaacatttcatctggaaaagtggaggtgacctgacgcttcactaccgg
cagaagtccacgtga

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