Triplophysa dalaica: 130413134
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Entry
130413134 CDS
T09616
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130413134 (pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130413134 (pan3)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130413134 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
130413134 (pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
Pkinase
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130413134
NCBI-ProteinID:
XP_056594088
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All DBs
Position
23:1355539..1366986
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AA seq
797 aa
AA seq
DB search
MNSGLPASAAPLGGVGIPCVKVKFCRYYAKDKTCFYGDECQFLHDDPSMASLSLHGGGAA
TGGGSPVSLSLAGGAVTAAGYALGGGVGSGAPANVPKKGDSLGPAVAAMEGQLLSIPGME
GGALNDAGLTNSYFSSTFIGVNGFGGPPESKYSMMQRMTSSSSSPSLLNDGGKSFSHSPH
DPVNSPTSSLFSDFGALNISQRRKAPNPTASEFVPKGPPRMASMSQTVPAFASPIFPHPG
LSSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPNLANYMVPTTASDQGG
GAHIIQKETVGGTTYFYTDNTPAPLAGMVFPTYHMYPQTAPHVAYMQPKANAPSFFMADE
LRQELINRHLMTMAQIDQSENPGVPSELDSYHSLFPLEPPPPNRLQKTSNFSYITSCYKA
VNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKVFGDHSLVFSY
DFHAGAETMFSRHFNDPAADSFFTKRKWGQHELPPPRQHAGLLPESLIWAYIVQLSSALR
TIHTAGLACRVMDPSKILITGKTRLRVNCVGMFDVLTFDNSQTNHLALMPQYQQADLISL
GKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVNDIMPMIG
ARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYL
LKLLRDHLFHQVTETGTPWIDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVVTYSDLKR
CFESTFQELLGATNGPL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtggactcccagcttcagctgctccgctcgggggtgtcgggataccctgcgtg
aaggtgaaattctgtcgttactacgcgaaagacaagacttgtttttatggcgatgaatgc
caatttctacacgacgacccatccatggcgagcctttctttgcacggcggtggtgctgcc
actggaggaggaagcccagtgtctttatctctggcagggggagcagtgacggcggctggt
tacgcgctcggaggcggcgtgggtagcggagctcctgcgaacgttcccaaaaagggcgat
tctctcggtcccgcggtagctgcaatggaaggacaactattatccatccctggaatggag
ggaggtgccctgaatgatgctggtctaaccaactcgtacttcagcagcacatttattggg
gtcaacgggtttggaggtccaccagagtccaagtattcaatgatgcagaggatgaccagc
agtagcagttctccaagtctactgaatgatggtggcaagagctttagccacagccctcat
gatccagtaaattccccgacgtcatctctcttcagtgattttggtgctttgaacatatcg
caaaggagaaaggcacctaaccctacagccagtgaattcgtccctaaagggcccccacga
atggcctctatgtctcaaactgtaccagcgttcgcatcccccatcttccctcatcctggc
ctaagcagctccacagcggctgctctcgcacctggtatgtccctttctgccggatcgtct
cctctccactctcctaaaatcacccctcacacttctccggccccgcggcgacgcagccat
acacccaacccaaaccttgccaattacatggtgcccaccactgcgtctgaccagggcggc
ggagctcacattattcagaaggagaccgtgggagggaccacgtacttctatacggataac
accccagctccattagccggaatggtgtttccgacgtatcacatgtacccgcaaacagcg
cctcatgtggcgtacatgcagccaaaggccaacgcaccatcattttttatggccgacgag
ctcagacaggagctgattaacagacatttgatgacaatggcacagattgatcagtctgag
aaccctggagtgccatcggagttagacagttaccacagcctctttcccctggaaccaccg
ccgcccaaccgtcttcagaaaaccagcaatttcagttacatcacttcctgttacaaggca
gtcaatagtaaagatgacctgccttactgcctcaggaggatacatggctttaggctggtg
aacaccaagtgtatgatgctggtagacatgtggaagaaaattcagcactccaatactgtg
accctcagggaggtcttcaccactaaagtgtttggagaccactcgctcgtattctcctat
gacttccatgcgggtgcggagaccatgtttagcaggcatttcaatgatcctgcggcggat
tcgtttttcaccaagagaaagtgggggcagcatgagctccctcctccccggcaacacgcg
ggtctgttaccggagtcgctcatctgggcttacatcgtccagctgagctcagctctgcgt
accattcacacggccggcctggcctgcagggtcatggaccccagcaaaatcctcatcact
ggaaagacacggttgcgagtcaactgtgtaggaatgtttgatgtcttaacatttgacaat
agtcagaccaaccacctggcgcttatgccccagtaccagcaagcagatctgatctctctg
gggaaggtggtgttggctctcgcgtgtaactctctagctggcattcagagggagaatttg
cagaaagccatggagcttgtgtccatcaactactcatctgacctcaagaacctcattctg
taccttctatcagaacagagccgtctgcgcagcgtcaatgacataatgcccatgatcgga
gcacggttttacactcagctagacgcctctcaaatgaggaacgatgtcattgaagaagac
ctggccaaggaggtacaaaatgggcgattgttccgcctactggccaaactggggaccatc
aatgagagaccagagttccagaaggatccaacatggtctgagactggcgaccgttacctg
ctaaagctcttgagagatcatctgttccaccaggtaaccgagacgggcacaccctggatc
gacctcagtcacatcgtgtcctgtctcaacaagctggacgctggagtaccagagaagatc
agcctcgtgtcgcgggatgagaagagtgttcttgtggtgacctactcggacctgaagcga
tgctttgagagcacctttcaggaactcctgggtgccactaacggtccgctctag
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