Triplophysa dalaica: 130413244
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Entry
130413244 CDS
T09616
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130413244 (nphp3)
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
130413244 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3
TPR_10
NPHP3_hel
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_14
NPHP3_N
AAA_16
TPR_11
TPR_6
TPR_19
NACHT
AAA_22
AAA_33
AAA_14
KAP_NTPase
DUF2225
AAA
Viral_helicase1
AAA_19
DUF4635
FtsK_SpoIIIE
XRCC4_CC
TPR-S
Motif
Other DBs
NCBI-GeneID:
130413244
NCBI-ProteinID:
XP_056594290
LinkDB
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Position
23:9092096..9108572
Genome browser
AA seq
1326 aa
AA seq
DB search
MAILKVWECSIRFLSHCHPPSTVAMGTASSLVSPGEVIEDAYGGERGEACEIPVEVKPKA
RLLRSSFRRGPRVIGASFKSTGSVELEYAAEYERLRKDYEIFRVSKNNEITSMQKKEAKL
DEENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETK
EKEIQDLLRAKRDLESKLQQLQAQGIQIYELEDSDSDDNRTTVTTAGTQCEFWSGGVLGS
EPSMGSMMQLQQTHRGPEFAHSLIDVEGPFANVNRDDWDAAVASLLQVSPHVSQSLWSNT
VRCYLIYTQETKAELQAFIETHSFKLQRFCEGLGHFYLNVSFPEESAILYAAERRQEIER
SSVCVLLLRSSVSNCVIEDVEEAFVKTPDSRPLVLYLRTGDRKGEKEEVSNLSQATRELL
ERVNKADKSAKLKVVDHAGSAEDGAALIFSQLEQIIKQELLGMEFEETGEVEEREEEDSG
DVLWDLHDEQEQIEAFQQACSAAARYSFQKYVDRLNDMVAAPPPTPPLLVSGAPGSGKSL
LLAKWIELQQKHSPNTLTLFHFTGRPLSTGADPVLIIKRLTVKLLQHFWSISGLSMDPSK
ILEEFPRWLERLSARHHGNIVIIIDSIDQIQNAERHMKWLIDPLPANVRVLVSVNVETCP
QAWRLWPTLHLDPLNPREVKSVISTECVNADIILTKDQEKKLERHCRAAATCNALYISLL
ARLITHSRSWTLERTLQQCVSCQDTVSLYRLGLKVVLDSLNTDLEKHVLRELLCLLCASH
NGVSESEALELFTDLCFPALTSMLCSLQSLLIITYACGLIRFQHPQACEAVNQEFLNEGR
QCGTYRQTLIQFFSRQLEQDRVTWRVADELPWLLEQQEDKVKLQMILLNLFVSQNLYKRG
HFSELLAYWQYVGKDKSSMATEYFDSLKEFEKTCDSEQSMCQLANLYETLGRFLKDLGLL
SQAVAPLQRSLEICETALDPDHPSVAQSLHQLAGVYVQWRKFGNAEQLYKQALEICENAY
GPEHSTVARELDSLSLLYQKQNKYEQAERLRKRSVKIRQKTARQKGHMYGFALLKRRALQ
LEELTLGKDSADCAKTLNELGVLYYLQNNLDAAKVFMTRSLEMRQRVLGADHPDCAQSLN
NLASLHSERKEYETAEELYEIALDIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPL
YELALDIREKSFGPKHPSVATALVNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPR
VGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAEPSLVCGKAPSHHSSSGDTFSLRSPG
LPHTTR
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggccattctgaaagtctgggagtgctctatcaggtttttgtcccattgccatccgccg
tccacggttgccatgggtacagcatcctctctggtaagcccaggtgaggtgattgaggat
gcgtacggcggggagcgtggagaagcctgtgagataccagtggaggtcaaaccaaaggcc
cgactgttgcggagttcgtttcgacgtggtcctcgtgtcatcggtgccagcttcaaatcc
acgggatcggtggaattggagtatgccgccgagtatgagcgtctcaggaaagactacgag
atcttcagggtcagcaagaacaatgagatcacctcaatgcagaagaaagaggccaagctg
gatgaggagaacaagagattgcgtgctgagctgcaggctcttcagaagacgtaccagaaa
attctcagagaaaaggaaagtgccctggaggcaaagtatcaagctatggagagggctgcc
acctttgagcatgacagagacaaagttaaacgacagtttaagatattccgggagacgaag
gaaaaggaaattcaggacttgcttcgggctaaacgagatcttgagtcgaaacttcaacag
ctgcaggctcagggcatccagatttacgaactggaagattcagattcagatgacaatcgg
accaccgtcaccactgcaggcactcagtgtgagttctggagtggtggtgtgttgggcagt
gagccgtcgatgggcagcatgatgcagttacagcagacacatcggggtccagagttcgct
cacagtctcattgacgtggagggaccgtttgcaaacgtcaacagagatgattgggatgct
gctgtggccagtcttctgcaggtgtctcctcatgtgtctcagtctctgtggagtaacaca
gtccgctgctacctcatatacacacaggagaccaaagccgagttacaggcctttatagag
actcactcttttaagcttcagaggttttgtgagggtttagggcacttttatctgaatgtg
tcctttcctgaggagagcgccattctgtacgcagctgaacgcaggcaggagatcgagagg
agctctgtgtgtgttctgcttctcagatcttcagtttctaattgtgttatagaggatgtg
gaggaagcctttgtgaaaactccagactctcgtcctcttgtgctgtatttgcggactgga
gacagaaaaggtgaaaaggaagaggtatccaacctcagtcaagccaccagagaactgctg
gaaagagtgaacaaggctgacaaaagtgccaaacttaaggtggtggatcatgcaggttct
gcagaggatggagctgctctcatcttctctcagttagaacaaatcatcaaacaggagttg
ttggggatggagtttgaggagaccggggaggtcgaggagagggaagaggaagactctggt
gatgtactgtgggaccttcatgatgaacaggagcagatcgaggcgtttcagcaggcctgc
agtgccgcggccagatacagcttccaaaaatatgttgatcgactcaatgacatggtcgcc
gccccaccgcccactccaccgctgctggtgtccggcgctcctggatccggcaaatctctt
ttgctcgctaaatggatagagttacagcagaaacactctcccaacaccctaactctcttt
cacttcactggacgtcctctctccaccggggcagatccagtgctcattattaaacgcctc
acagtgaagcttctccagcacttctggtctatctctggtctctcgatggacccttccaag
atcctcgaggaattcccacgctggctagaacgtctgtctgcgcgtcaccatggcaacatc
gtaatcatcattgactcgattgaccaaatccagaatgccgagcgtcatatgaagtggctg
attgatccacttcctgctaacgtgagggtgctggtgtcagttaatgtggagacctgccca
caagcatggagattgtggccaacgcttcatcttgacccacttaatcccagggaggtgaag
agcgtcatcagcacagaatgtgtaaatgcagacatcatactcactaaagaccaggaaaag
aagttggagagacactgtcgggcagctgcaacctgcaacgctctctacatctcactgttg
gccagactcattacacactccagatcctggacgttggaaaggactctacagcagtgtgtg
tcttgtcaggatacggtgtcgctgtatagactgggcctgaaggtggtactagactcattg
aacacagatctggagaaacatgtcttgagagagttgctgtgtttgttgtgcgctagtcac
aacggtgtgagcgaatctgaggctttggagctattcacagacctgtgttttcctgcgctc
acctcaatgctttgcagcctgcagagtttgctcataatcacttatgcctgcggcctcatc
cgctttcagcatccacaggcctgtgaagcggtcaaccaggagtttctaaatgagggccga
caatgtggaacttatagacagacactaattcaattcttcagccgtcagctggaacaagac
agagtcacatggcgtgttgcggatgagttaccgtggttactggagcaacaggaagacaag
gttaaactccagatgattctgcttaacctctttgtgtctcagaacctctacaaaaggggt
catttctcagagcttctggcatactggcagtatgtgggaaaggacaagagttccatggcc
acagagtattttgactctttaaaggagtttgagaagacttgtgacagcgagcagagcatg
tgtcaactggccaacctctacgaaacactgggccgcttcctgaaagatctgggattactc
agccaggcggtggcccccttgcagcgttccttagagatttgcgagacggctctagacccg
gaccacccgagcgtggctcagtcactgcaccaactggcgggtgtctacgttcagtggagg
aaatttggaaacgcagagcagttgtacaaacaagcgttggagatctgtgagaacgcctat
ggacccgaacacagcactgtggctagagaactagactcactttcactcctctaccagaaa
caaaacaagtatgagcaggctgagaggttaagaaagagatcagtcaaaatcagacagaaa
acggcacgccagaagggccacatgtatggttttgctcttttgaaacggcgagcactgcag
ttagaggaactgacgcttggtaaagactctgcagattgtgccaagactctaaatgagctc
ggagttctttattacctgcaaaacaacctcgatgccgcaaaagtgttcatgacgcggtcg
ctggaaatgcgtcaacgcgtactgggagctgatcaccccgactgtgcccagtctttgaac
aacctggcctcgctgcacagcgagcgaaaagagtacgagactgcagaggaactgtatgaa
atagccctcgacatccgcaaaagagccctggcgcctgaccatccctctctcgcctatacc
ctcaaacacttggccatgctttacaagcgcagggggaagctggaaaaagcagttccacta
tatgagttagctcttgacatcagagaaaagagctttgggcccaagcaccccagtgtggcc
acagctttggttaacctagctgtgctttactgccaattgaagcaacacagtgatgctctg
cctctgtatgagcgggcgctcaaggtgtacgaggacagtctcggacgactgcaccctcgg
gtcggagagaccctcaaaaacctagctgtgctcagttatgaagagggagacttcgagaag
gctgcggaattgtacaagcgagccatggagataaaggaggcggagccatctttggtttgc
ggtaaagccccatcacatcactcatccagcggagacacatttagtttacgaagccccggc
ctgcctcataccacaaggtga
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