Triplophysa dalaica: 130413313
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Entry
130413313 CDS
T09616
Symbol
itgb1a
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-1a
KO
K05719
integrin beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03271
Virion - Rotavirus
tdw04145
Phagosome
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04514
Cell adhesion molecules
tdw04530
Tight junction
tdw04810
Regulation of actin cytoskeleton
tdw04820
Cytoskeleton in muscle cells
tdw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
130413313 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130413313 (itgb1a)
04514 Cell adhesion molecules
130413313 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130413313 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130413313 (itgb1a)
04530 Tight junction
130413313 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130413313 (itgb1a)
04810 Regulation of actin cytoskeleton
130413313 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130413313 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130413313 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130413313 (itgb1a)
04515 Cell adhesion molecules [BR:
tdw04515
]
130413313 (itgb1a)
04090 CD molecules [BR:
tdw04090
]
130413313 (itgb1a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130413313 (itgb1a)
Exosome [BR:
tdw04147
]
Exosomal proteins
Proteins found in most exosomes
130413313 (itgb1a)
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin beta subunits
130413313 (itgb1a)
CD molecules [BR:
tdw04090
]
Proteins
130413313 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
130413313
NCBI-ProteinID:
XP_056594389
LinkDB
All DBs
Position
23:11383565..11406515
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLFISTLLGIVCYSSAQQEGNECIKANALSCGECIQVGAKCGWCTDADFLKQGEPT
SARCDELESLLKRGCAVSKVENPRGSQKTLNNKPVTNRKKGAEKLRPEDITQIQPQKLSL
KLRSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGNHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTQEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTFTYQSHCKNGIVNDGENGRRCSNISIG
DEVSFSINITAQGCPRPGKSESIKIKPLGFTEEVEIMLSFICECDCHKQGIKNSDLCHNG
NGTFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKK
RDNPEERYSGKYCECDNFNCDRSNNKLCGGHGRCECRVCKCDANYTGSACDCSLDTSTCL
ASNKQICNGRGTCECGTCRCTDPKFQGPTCEICPTCPGVCPEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVED
LECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTEN
PIYKSPINKFQNPNYGRKAVAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctacttttcatatcaacattattaggcattgtttgttacagcagtgca
cagcaagagggcaatgagtgcatcaaagccaatgcattatcctgtggagagtgtatacaa
gtgggggctaaatgtggctggtgcactgatgcagactttcttaaacagggagaacccaca
tcggcccgctgtgatgagctggagtcactcctaaagagaggctgtgcggtctccaaagtc
gagaaccctcgtgggagtcaaaagaccctcaataacaagccagtgaccaatcgcaagaaa
ggagccgaaaaactcagacccgaggacatcacacagatccagccccagaaactcagcttg
aaactcagatctggtgagcctcagaatattaaactgaagttcaagagggctgaggactat
cccattgacttgtattaccttatggacctgtcctactctatgaaggatgatttggagaat
gtaaaaaacctggggactagtttgatgctggagatgtccaaaattacctcagatttcaga
attggttttggctcttttgtggagaagaccgtcatgccttatattagcaccactccagcc
aaacttcttaacccttgtaccggtgaccaaaactgcaccagtcccttcagctacaaaaat
gtgctgaaactcactagcaatggtcagcagttcaatactctggtgggccagcaacagata
tctggtaatcttgactcacctgagggaggatttgatgctatcatgcaggtggctgtttgt
gggaaccacattggctggagaaacgtcactcgtttgttggtgttctctactgacgcaggt
ttccactttgccggagatggaaaactcggtggaatcgttcttcccaacgatgggaaatgc
cacctggaaaacaacatgtatacaatgagccattattacgattatccctccatcgcccac
ttggttcagaaactgagcgaaaacaacattcagaccatatttgccgtcacgcaagagttt
cagcctgtttacaaagaacttaaaaacctcattcccaagtctgccgtgggcacactgtcg
gcaaactccagcaatgttataaaccttattattgatgcctacaattctctctcctcagag
gtcatcctggagaacagtaaacttcctgaaggcgtgaccttcacatatcaatcccactgc
aaaaatggaatagtgaatgatggtgaaaatggaaggagatgctccaacatttccattgga
gatgaggtatcctttagcattaatatcacagctcagggctgccccagaccaggcaagtca
gaaagcattaagatcaaacccttgggctttactgaggaggtcgagatcatgctctccttt
atctgcgagtgtgattgtcacaaacaaggcattaaaaacagcgacctgtgccataacggc
aatggaacatttgagtgtggagcctgcaggtgcaataagggacgtgttggacgacagtgt
gaatgtcgtaaggacgaggtgtccaccgaggacctggacaagaactgccgcaaggacaac
ggtacagacatctgcagcaacaacggcgagtgcgtgtgcggcacctgcgagtgcaagaag
agggacaatccagaggaacgctacagcggcaaatactgcgagtgcgacaacttcaactgc
gaccgttccaacaataaactctgcggaggacatggccgttgtgagtgcagagtgtgcaaa
tgcgacgctaactacactggaagtgcctgtgactgctctctagacacatctacatgttta
gcctcaaacaagcagatctgtaatggcagagggacctgcgagtgtgggacctgcaggtgc
acggaccctaaattccaagggcccacctgtgagatctgccccacctgtcctggagtctgc
cctgagcataaggagtgtgtgcagtgtcgggcgttcggcacaggagagaagaaagacacc
tgcgagagagactgtagttactttaacctcatcaaggtgaaggacagagacaagctccct
cagcccgtccaggccttccctcttatgcactgcaaggagagagacgccaatgactgctgg
ttctactacacctacgccgttaacaacaacactgagaaggaggtccatgtggtggaggat
ttagagtgtccagctggtcctgacatcatccccattgtggccggtgtggtcgcgggcatc
gttctgattggtttagccctgctgctgatctggaagctgctcatgatcattcatgaccga
cgcgagtttgccaaatttgagaaagagaagatgaacgccaagtgggacacgacagagaat
ccaatttacaagagtcctattaataaattccagaatccaaactatggacgtaaagctgtt
gctctttaa
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integrated database retrieval system
