Triplophysa dalaica: 130413396
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Entry
130413396 CDS
T09616
Symbol
lama1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130413396 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130413396 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130413396 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_N
Laminin_B
Laminin_II
Laminin_I
Laminin_G_3
Peptidase_S8_N
Motif
Other DBs
NCBI-GeneID:
130413396
NCBI-ProteinID:
XP_056594529
EnsemblRapid:
ENSTDLG00000011315
LinkDB
All DBs
Position
23:19636670..19664867
Genome browser
AA seq
3085 aa
AA seq
DB search
MMMMRRRVLALMCATLVCVEGQQRGLFPAILNLASDADITTNATCGEPVSEMYCKLVEHV
PGRRIRNPQCRICDASSQNPKEQHPITNAIDGTNQWWQSPSIKNGRQFHWVTITLDLRQV
FQVAYIIIKAANSPRPGNWILERSLDGVNFQPWQYYAISDTECLTRYNVTPRLGPPTYKR
DDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLTPELLDFTSARYIRLRLQRIRTLNA
DLMTLSYRDPKDVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVTKKLLCVCEHNT
CGESCNECCPGYHQESWQPGTLSVGNTCKKCNCHNKADDCYYNQTVADLKLSMNTHGQFV
GGGVCINCSHNTAGVNCQTCADGYYRPHEVSPHSDEPCVECECDMRGSMSPVCVRDDNHT
DPHTGLSAGQCLCKEGFAGDKCDRCAFGYRDFPICSRCECHLDGSLNIDPCRECVCKAHV
MGSNCDLCKQGFYNLQANNPEGCTECFCFGVSDVCESSIWFSGSVEHKDGLLLRSLQTPS
IFSLPVSEDNLIVSNSTATAGVLSVWSWAAPESFLNNKLTSYGSFLNYSVAYDVPEENED
KTLPAHFNVIIEGNGQTLRQTQSTGVVLSAHRQQHVSLQVVPHTFTDARSGRKVQRDELM
TVLADVAALRVRAELEDSAEGALRLSSVSLGVGEERISPDVEQCECPWGYSGSSCEYCIS
GFYRVGGILFGGNCLQCECNDHAAECDINGECLGCEHNTTGAHCDHCLPGFYGDPSEGTP
DDCQRCACPLTLASNNFSPTCTLQTPGDYTCDQCQLGYSGHKCERCANGYYGDPTVLGQS
CSLCECNGNVDSSEPGHCDGLTGECLKCLSYSSGRHCERCQDGFYGDAVTEKNCQPCGCY
GNGSLSAVCNVITGQCDCKRDVLGQTCDRCQDGYHGINSRDGCSXCECDQSGSLSASCDE
EGRCQCVTGVRGDKCERCDRGYYDFKENGCTPCDCTHTHGNCNAETGECICPPHTHGPKC
EECETDHWGHDTVSGCTACNCSIVGSSVSRCDLLSGQCACKPHFSGLMCEGCALGYKNFP
ECTACNCNPNGTLEEFCDWTMGVCGCEDQGQCSCKENVGGVGCDECKGGTFGLSPQNPSG
CSPCFCLGVSSLCEEMSGLVRVPITLGSDPALLRAVSQSDLQGTLEGVYYTDNEMLLDAS
HLHSLSVLTAPFYWRLPQLYHGNKLLSYGGKLSYTVAFFALEGVGLANHEPQVLMRGGHL
RKLVIYTDLPPPENGIHSRQEVPLTEHKWKYFNSVSETAVSHTDFMSVLSNVEYIIIKAS
YGTGLQQSRISNISMETAVDAEEFDGGEVARLVETCECPLGYAGLSCQECAPGYYRQPVS
ELVMKGRNRPIIQPCVPCQCNNHSLSCDLDTGKCLGCQHNTAGDHCHVCSPGHYGKVQGS
ISDCSLCACPLRGQSFSSTCVLEGAGDFRCDRCDEGYEGRYCERCSVGYYGIPSAPGGRC
QPCQCSEAGSVHGLCEAHTGKCECKVGVRGHLCDLCEERHVLMNDQCVSCDDDCTGVLLD
DLEALERSITSLNLTGVVLAPYSQLLTVENQTREVKSLMSWERTPTSQLTTGEENLSNIT
IHITELQLQAESVFGLSADVMTTSQKRLAQGREMLGFIIDVHSQIQSLMEEAGSLNETVD
EVLDEMNSTYLMEEMSSTLEKMRVFDLTSCGLTAQNEHNSAVAVLRSVQDEISQPQRHNH
IKQENISSTLSRYNQLLLDARESLNTATSHSSQTHHLLKDVQRNLQEFTVSRNNVSHVKQ
EVETQTQDAQDLLTDALDTAENMSNGTAKLEEMKSDVDLLSPALRKHVDTLVMELMARDA
LQLVYKAEYHAQTLITEAQNLNSSLSEVRSASLNITSITQTNNNIRADIQLAEHLARAAN
ESAGSALNLTSESENSLTVHGQTSLLMSSEVLDDSRSLKNQTEWLMFKSSEVISRLNLSR
RNLQNFTQLLPDAFMTFTDQTNHSRAEVLEAKKQAEAANTSLQKTLQRLEDYSVKLREAW
SAVSSANHSVRSSSEMLRVSEDTTSAVRSTLDDARLQADRLLDRLKPLQALGENLGRNLS
DIRELISQARKQAASIKVAVSADRDCVRAYKPEITSSNFNTLTLTVKTTEPDNLLFYMGS
SLTEDFMALEMRHGKVSFLWDTGSGFTKLEYPNVEINNDKWHRINATRFGRHGTLTVQQT
DSEPIPTVKTTAAGSSTVMDMNKSSWVFVGGLGGQVKKSPAVKMTDFKGCMGEASLNENN
IGLWNYREREGECEGCFMSLRTEDTSFHFDGSGYSVVEKSLRSMSTSIVMFFKTFSPNGL
LLYLASNGTRDFLSIELVEGKVHLTFELGSGALTLTSNKTYNTGTWYRIALQRNKRRGHL
SVMAAENPSEREVMEAESPGSASDLNRSDLDPIYIGGLPASRPIRRQVVARSFVGCMKNV
EIARTNFDLLRESYGVKKGCVLKPIRSVSAFGDGFLEMPAVIMGSHTEIMTTFSTKHDSG
IILAGFSRSEGRSRGPTQQQSFLAVTLVSGSVEVRVGVSEGGAVHKAVVKSRNGSFSDGQ
EHSLILQKNKRSITVFVDEENQASVKLGSSADKSLTLGRLCVAGVPAGESITAGLDSTQS
FYGCIRNMAVDGVLLDLSTALHYENVDMDSCLLHERPRHVILPDDAEPTPDPAARPLTPD
PAELDAVAAHSTSCVAMDDTGSIPESHQFGLSRHSHVIMSFKNKTVRTSFTVKMSVRTFS
PSGLLFYMANANQQDYAVLQVQNGRLLFSCDLGKGPASATLPIITISDGHWHSVRAEFNK
RSVIVSVDGSDSEHVSTKGHTLDVEGKLYVGGLPATYTAKRIGNVTHSLAGCVQNVMFNS
VLMNLSSPVSSHLTGSCFSSVQDGTFFSGRGHAAFMKEGYNVGSDVTVTLEFRSSSQDGV
LLGISSRKVDAIGLELINGQVVFNVNNGAGRITATSRARGVLCDARWHTVVAKKQKHSLS
LTVDGVTVTTENPYSSSTSAETKNPIYVGGYPADVKQNCLSSRESFHGCMRNLRLMKGHV
TDVLDFSSAFTHTHVFPHACPADAA
NT seq
9258 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgcggcggcgggtgctcgcgcttatgtgcgcgaccctggtgtgtgtggag
ggccaacagagaggtctgttccctgctatcctgaaccttgccagcgatgcagatatcacg
actaacgccacgtgtggtgaacccgtttctgagatgtactgtaaactagtggagcatgtt
cctggaagacggatccgtaaccctcagtgtcgcatctgtgatgctagcagccaaaatcct
aaagaacaacaccccatcaccaacgccatcgacggcactaaccaatggtggcagagccca
agcatcaagaacggtcgtcagtttcactgggtcaccattactctggacttaagacaggtc
ttccaggtcgcttacatcatcattaaagcagccaactctccacgacccggtaactggatt
ctggagcgttctctggacggagtgaacttccagccgtggcagtattatgctatcagcgac
acagagtgtctgacccgatacaacgtcaccccccgcctcggcccccctacatacaagagg
gacgatgaggtcatctgtacatcctactactcgcgtctggtgccgctggagcacggcgag
atccacacgtctctgataaacggccgtcccagcgcagatgatctgaccccagaactgctg
gatttcacgtctgcgcgatacatccgcctgcgtctgcagagaatacgcacgctcaacgct
gacctcatgaccctcagctacagagaccctaaagatgtcgatcccatcgtcacccgacgg
tattattactctatcaaagatatctcagtgggcgggatgtgtatctgctatggccatgcc
cagagctgcccgtgggatcctgttaccaagaagctgctgtgtgtgtgtgagcacaacacg
tgtggtgagagctgtaatgagtgttgtcctggatatcatcaggagtcgtggcagcccgga
acactttcagttggaaacacatgcaagaagtgtaactgtcacaataaagcggacgactgt
tactacaatcagacggtggccgatctgaagctcagtatgaacacacatggacagtttgtg
ggaggaggtgtgtgtatcaactgctcgcacaacaccgctggggtcaactgccaaacatgt
gctgacggatactacagaccacacgaggtgtctccgcactctgatgagccgtgtgttgag
tgtgagtgtgatatgagaggatccatgagtcccgtgtgtgtcagagatgataatcacaca
gatccacacacaggtttgtctgcaggtcagtgtttgtgtaaagagggttttgctggtgat
aaatgtgaccgctgcgcctttggatacagagattttccaatctgctctcgctgtgaatgt
catctggacggaagtctcaacatcgacccgtgcagagagtgtgtgtgcaaggctcatgtg
atgggctccaactgtgacctgtgtaagcagggcttctataacctgcaggccaataatcct
gaaggatgtactgagtgtttctgttttggcgtgtcagacgtgtgtgagagctcaatctgg
ttctccggctcggtggagcacaaagacgggttgctcctgcgctctcttcagactcccagc
atcttctcacttcctgtctcagaggacaacctcatcgtgtctaactctacagcgactgca
ggcgtgctatcagtgtggtcatgggccgctccagagtccttcctcaataacaagctgaca
tcatacggaagtttcttgaactacagcgtcgcctatgacgtacccgaggagaatgaggac
aaaacgcttcctgcacatttcaatgttattattgagggtaacggtcagacgctgagacag
acgcagtcgactggtgtggtgttgagtgctcaccgtcagcagcacgtctcactgcaggtt
gtgccccacacgttcacagacgctcgcagcggacgcaaggttcagagagatgagttaatg
acagtactggctgatgtggctgcgctccgggttcgagctgagctggaggatagcgctgaa
ggagcactcaggctgagctccgtgtctttaggtgttggagaagaaaggatctctccagat
gtggaacagtgtgagtgtccctggggatattcaggctcttcatgtgagtactgtatttct
ggattctatcgtgtcggagggattttgtttggaggaaactgtcttcagtgtgaatgcaat
gatcacgcggcagagtgtgacatcaacggagagtgtttgggatgtgaacacaacactaca
ggagctcactgtgatcactgcctgccaggtttctatggcgaccccagcgagggtacgccg
gatgactgccagagatgtgcgtgcccgctgacactggcatctaacaatttcagccctaca
tgcacactgcagacccccggagactacacatgtgaccagtgtcagctgggatattctgga
cacaagtgtgagaggtgtgctaacggttactacggcgacccgacggttctgggacagagc
tgttctttgtgtgagtgtaatggaaacgtggattcttcagaaccgggtcactgtgacggc
ctcacaggagagtgcctcaaatgtttgagttactcatcgggtcggcactgcgaacgctgt
caggacggtttctatggcgacgcagtgacggagaaaaactgccagccttgcggttgttat
ggtaacgggtcgctgtccgccgtgtgtaacgtgatcacgggtcagtgtgactgtaagcgt
gacgtcttgggacagacatgtgaccgctgtcaggatggatatcacgggatcaacagcaga
gacggctgcagcncctgtgaatgtgaccaatcagggtcgctgtctgcgtcatgtgacgag
gaggggcggtgccagtgtgtcaccggagtgaggggtgacaaatgtgagcgttgtgaccgc
ggatactacgactttaaagagaacggctgcacaccatgtgactgcacacacacacacggg
aactgtaacgcagagacgggcgagtgtatctgtccccctcacacacacggacccaagtgt
gaagagtgtgagacagaccactggggtcatgacaccgtgtccggctgtacggcatgtaac
tgcagtatcgttggctccagcgtgtctcggtgtgatctgttatcaggtcagtgtgcgtgt
aaaccccatttctcaggattaatgtgtgaaggctgcgcactgggctacaaaaacttccca
gaatgcacggcatgtaactgcaatcccaacggcactctggaggagttctgcgattggacg
atgggcgtgtgtggatgtgaagatcaaggacagtgttcctgcaaggagaatgtgggcggt
gtcggatgtgatgagtgtaaggggggcacgttcggtctgtcacctcagaacccttccggc
tgcagtccgtgcttctgtttgggtgtttccagcttgtgtgaggagatgagcggtctggtg
cgagtgccgatcactctgggttcagatccggctcttctgcgtgcggtgtctcagagtgac
ctgcaggggacgctggagggagtttattacacagataatgagatgctgttagacgcgtct
cacctccacagtctgtctgtcctcaccgctccattttactggagattgccccaactgtac
cacggtaacaagctgttatcatacggaggaaagctctcgtacacggtggcattctttgct
ctcgagggagttggactggccaatcacgagcctcaggttctgatgagaggcggacacctg
cggaaactggtcatctatacagatctcccgccgccggagaacgggatccacagcagacag
gaggttcctctgacagagcacaagtggaaatatttcaactctgtgtctgagacggctgtg
agtcacaccgacttcatgtctgttctgagtaacgtggaatacataatcatcaaagcgtca
tacggcaccggcctacagcagagcagaatctctaacatctccatggaaacggcagtggat
gcagaggagtttgatggtggtgaggtggcgcggctggtggagacgtgcgagtgtccgctg
ggatacgctggactctcctgtcaggagtgtgctccgggatattaccgtcagcccgtgtca
gagctggttatgaagggaagaaaccgacccatcattcaaccctgcgtcccgtgtcagtgt
aacaatcacagtctgtcatgtgacctggacacgggcaagtgtttgggatgtcaacacaac
accgcaggagatcactgtcatgtgtgcagcccagggcattatgggaaggtgcaggggtcc
atcagcgactgctcgctgtgtgcttgtccactgaggggtcagagtttcagctcgacgtgt
gttttggaaggcgctggtgatttccgctgtgatcgctgtgatgagggttatgaggggcgt
tactgtgagaggtgttcagtgggttactacggtatcccctccgctccaggcggccgatgc
cagccgtgtcagtgcagcgaggcagggtctgttcatggcttgtgtgaggcacacacagga
aagtgcgagtgtaaggttggggtcagaggtcatctgtgcgacctgtgtgaggagagacac
gtgctaatgaacgaccagtgtgtgtcgtgtgacgacgactgcaccggtgttctgctggat
gatctggaagctttagagagatccatcacgtctctgaacctgaccggtgtcgttctcgca
ccctacagtcaactgttgactgtagagaaccagactagagaggtgaagagtttgatgtct
tgggagcgaacaccaacctcccagctgaccacaggagaggaaaacctgagcaacatcacc
attcacatcactgagttacagctgcaggcagagagtgtgtttggtctcagtgctgatgtc
atgacgacctcacagaagagactcgctcagggcagagagatgctaggcttcatcattgat
gttcactcacagattcagagtctgatggaggaggcgggttcattgaacgagactgtggac
gaagttctggatgagatgaacagcacatacctgatggaggagatgagcagtacgctggag
aagatgcgagtgtttgatctgacgtcctgcggtctgacagcacagaatgaacacaattct
gcagtggcggttctccgcagcgttcaggatgagatatcacagcctcagcgtcacaaccac
atcaaacaagaaaacatctcctcaactctctccagatataaccagctgctcctggacgct
cgcgagagtctgaacacggccacaagtcacagcagccaaacacatcatctgctaaaggac
gtccagagaaacctccaagagttcacagtctccaggaacaatgtgagtcatgtgaaacag
gaagtagagacacagacacaggacgctcaggacctgctcacggatgctctggatacagca
gagaacatgagcaacggaacagctaagctggaggagatgaagtctgatgtagatctgttg
agtccagctctcaggaaacatgtggacactttagtgatggagctgatggctcgagatgcc
ctacagctggtgtacaaagcagaatatcacgcgcagacgctcatcacagaggctcagaac
ctcaacagttctctgtctgaggtgagatctgcatcactgaacatcaccagcatcacacag
accaacaacaacatcagagcagatatacagctggctgaacatctcgcccgggccgccaat
gaaagtgcaggctccgccctcaatctgacctccgagtctgagaactcactaactgttcac
ggacagacgtctcttctgatgagctcagaggttctggatgacagcagatctctgaagaac
cagacagaatggctgatgtttaaatccagtgaagtgatcagcagattgaatctcagcaga
cgaaaccttcagaacttcacacagctgctgccagacgccttcatgacctttacagaccaa
actaaccacagcagagctgaagttctagaagccaaaaagcaggcggaggcagccaacacg
tctctacagaaaactctccagcgattggaggattatagtgtgaagctgagggaggcgtgg
tctgcggtcagctctgccaatcacagcgtcaggagctccagtgagatgctcagagtctca
gaggacaccaccagtgcagtcagatccacgctggacgacgcccgtctgcaggctgatcga
ctcttggaccgcctgaaacctctgcaggcgctgggcgagaatctgggccgaaatctgtca
gacatcagagagctgatcagtcaggcccgtaaacaagcggcgtctattaaagtggccgtg
tctgccgatcgagattgtgtccgagcgtacaaacccgaaataacctccagcaacttcaac
acgctcaccctgacggtgaagacaacagagccggataatctgctcttctacatgggcagc
agtctgaccgaggattttatggctctggaaatgcgtcatgggaaagtttcattcctgtgg
gacactggatctggattcactaaactggagtatccaaacgttgagatcaacaatgataaa
tggcaccggatcaacgccactcggtttgggagacacggcactctcaccgttcagcagact
gactctgaacccatacccaccgtgaagaccaccgccgctggctcctctaccgtcatggac
atgaataaatccagctgggtgtttgtgggaggtttgggtggtcaggttaagaaatctcca
gcggtgaagatgaccgattttaaaggctgtatgggagaagcatcgctgaatgagaataac
atcggcttatggaactatcgtgaacgagagggagagtgtgaaggatgcttcatgagcctg
cggacagaagacacttcatttcactttgacggcagtggatactcagtggttgagaagtct
ctgcgctcgatgtccaccagcatcgtcatgttcttcaaaacgttctctccaaatggactg
ctcctctatcttgcctccaacggcacgagagatttcttatccatcgagctggtggaagga
aaagttcacttgacctttgaacttggttctggagctctcaccctgacctctaacaaaaca
tacaacacgggcacctggtaccgcatcgccctgcagagaaacaaacgcagaggtcattta
tcagtgatggcggcagaaaatccttctgagcgagaggtcatggaggcggagtcaccgggg
tctgcctctgacctcaatcgctcagacctggaccccatttacattggtggccttcccgcc
tctcgaccaatcagaaggcaggtggtcgcgcgctccttcgtgggctgtatgaagaatgtt
gagattgctcggacaaactttgatctgctcagagaatcctatggagtgaagaaaggatgt
gtgctgaagcccattcgcagtgtgtcagcgtttggtgatggtttcctagagatgcctgct
gtcatcatgggttcacacacagagatcatgaccacattctccactaaacacgacagcggg
atcattctggctggattcagcagaagtgaaggacgctcacggggaccgacacagcagcag
tcattcctggccgtgacgctcgtatctggctctgtggaggtccgtgtgggcgtgtctgag
ggcggggccgtgcacaaagctgtggtcaaatcacgaaacggctcgttcagcgatggacag
gagcattctctcatactgcagaagaataaacggagcatcacagtgtttgtggatgaggag
aatcaggcatctgtgaagttgggctcatctgcagataaatctctgacgctgggacgtctc
tgtgtcgctggtgttcctgcaggagagagcatcaccgccggcctcgactcgacacaatca
ttctacggctgtatcagaaacatggctgtggacggagtgttgttggatctgtccactgct
ctgcactatgagaatgtggacatggacagctgtttactacacgagagacccagacatgtt
attctgcctgatgatgcggagccgacccctgaccccgctgcacgacccctaacccctgat
ccagcagagctggatgccgtcgcagcacacagcaccagttgcgttgctatggatgacaca
ggcagcatcccagaatcccaccagtttggcctgtccagacacagtcacgtgatcatgagc
ttcaagaataagacggtcagaaccagttttacagtcaagatgtccgtacgcactttctct
ccgagcggtcttctgttctacatggctaacgccaaccagcaggattacgcagtgctgcag
gtgcagaacggccgactgctgttctcttgtgatctgggcaaaggtcccgccagcgccacg
ctgcccatcatcaccatcagtgacggacactggcacagcgtcagggctgaattcaacaag
agatctgtgatagtcagtgtggacggatcagactctgaacacgtctctactaaaggacac
acactcgacgtggaggggaagttgtatgtcggtggacttcctgcaacatatacagccaag
agaatcggaaatgtgacacacagtctggcgggttgtgtgcagaacgtgatgtttaacagc
gtcttgatgaatctcagcagtccggtgtcttctcatctgacgggttcatgcttcagcagc
gttcaggacgggacgttcttcagcgggagaggacacgccgctttcatgaaggaggggtat
aacgtgggctcagacgtgacggtgactttagagtttcgctcatcatcccaggacggagtt
ctgctggggatcagcagtcgtaaggtggacgctatcggtctggagctcatcaacggacag
gtggtgtttaatgtgaataacggcgccggacgcatcacagccaccagcagagcccgtggg
gtgttgtgtgacgcccgctggcacaccgtagtggccaaaaaacagaaacacagtctgagc
ttgaccgtagacggcgttactgtgacaacagagaacccatactcatcctccacctcagcc
gagaccaaaaaccccatctatgtggggggatatccagctgacgtgaagcagaactgtctg
agcagcagagaatcattccacggctgtatgaggaacctgcgtttgatgaagggtcacgtg
acggatgttctagacttcagctcagccttcacacacacgcatgtgtttcctcacgcctgt
cctgctgacgctgcttaa
DBGET
integrated database retrieval system
