Triplophysa dalaica: 130413557
Help
Entry
130413557 CDS
T09616
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130413557 (trpc1)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130413557 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
130413557
NCBI-ProteinID:
XP_056594830
LinkDB
All DBs
Position
23:complement(13032551..13050477)
Genome browser
AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDASSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGEFNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHINKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILSVLTVALLWP
LLSVCYLFGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPALEL
IDYLLILWIFGMVWSDVKRLWYEGLEDFLEESRNQLSFIMNSLYLATFVLKVVAHSKFKN
EETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLISFTIGLTQLYGKDQKDPARSRDESKDCEGIFCQRQSNDTFHTFMGTCYALFW
YIFSLAHVALFVTRISNTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGRVKRQNS
LKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYGMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtattctctctctgttataatggctgctctatatcagggc
acggacgcgtcctctccggataaatatctggcgttaaaggacgtcagagaggtgaaggag
gagactactttagatgagaagctctttctgctggcctgcgagaagggtgactactatatg
gtgaagaaacttctcgaggagaagcgacatggcgaattcaacatcaactgtgtagatgtg
ctgggtagagatgctgtcaccatttcgattgaaaatgagaatctagacattcttcagttg
ctattagatcatggctgccaggcaacagacgcattattagtggctattgattcagaagtt
gtaggagctgttgatatcctgctcaaccatcggcccaggcgttcctctaagccttctatt
gcgaaattaatgcagcgcatccaaaaccctgagtactcgaccactatggatgtcgctcca
gtcattctcgctgcccacaggaacaattatgagattctgaccatgctgttaaagcaagac
atctcgcttccccgacctcacgctgtaggctgcgagtgcaccctctgtaatgccaagaac
aaaaaggacagcctccgccactcaaggtttcgtctagatatctaccgatgccttgccagc
ccatccttgatcatgcttacagaagaagaccccatactccgagcatttgagctcagcgct
gacctgagagagcttagcctggtggaagtggagtttcgaaatgattatgaagaacttgcc
aagcagtgcaagatgtttgccaaggacctgctggctcaggcccgaaactctcgtgaactg
gaggtcatactgaaccacacatccagcgaagaccacataaacaagagaggcctgatggag
gagcgcatgaacctcagtcgactcaaactggccatcaaatacaaccagaaggagttcgtg
gcccagtccaactgccagcagttcctgaacacagtgtggttcggagagatggcaagctac
cgccgtaagcacacgtgcttaaagatcctgtctgttttgacagtggctctactgtggccg
ctgctgtccgtctgttacctgtttggacctcgatcccgcgtgggtcaggtcatccacaca
cccttcgtgaagttcatcattcacagcgcctcttacttcacctttctcctgctcctaaac
ctgtactcactggtctacaatgaggacaagaagaataccatgggtcctgctttagaactg
attgactaccttcttatcctctggattttcggaatggtgtggtcggatgtgaagcgcctg
tggtatgaaggcttagaggatttccttgaggagtcccggaaccagctgagtttcatcatg
aactcactttatttggccacatttgtcttaaaagtggtggctcacagcaagtttaagaat
gaagagactgaaagaaaaaactgggacgcttttcatcccatcctggtcgcagagggtctc
tttgcttttgccaatgttctgagttatctacgtctcttcttcatgtacaccaccagctcc
atcttggggcccttacagatctccatgggtcagatgcttcaagagtttggcaagtttctt
ggcttgttcctgctggtgctcatctctttcaccatcggcctgacacagctctatggaaag
gaccagaaggatccagccagaagcagagacgaaagcaaagactgcgaaggcatcttctgt
cagcggcagagcaacgacacgtttcacacgtttatgggaacatgttatgcgctgttttgg
tacattttctctctggcacatgtggctttgttcgtcacgaggatcagcaacacagaggag
ctgcgttcattcgttggcgctcttatcgtcggcacatacaacattgttgtagtcatcgtt
cttaccaaactcctagtggctatgttgcacaagagcttcagacaaatcgccaaccacgaa
gacaaggagtggaagtttgcccgtgccaagctgtggctcagctacttcgatgacaagtgc
accctgcctccaccgttcaacattctcccctcgccgaagactgtgtgttatctggtgatc
agcttaagcaaatggatctgctcccacacctccacaggcagagtcaagagacagaacagc
ctcaaggaatggaagaacctcaaacagaagagagatgagaactatcagaagatcatgtgc
tgtctggtgcaccgctacctgacgtccacacggcagaagatgcagagcaccgatcaggcc
acggtggagaacctcaacgatctgcgtcaagacctgtccaagtttcgcaacgaaatgaga
gaccttctgggcttccgcacctctaaatacggcatgttctaccccagaagctaa
DBGET
integrated database retrieval system
