Triplophysa dalaica: 130413878
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Entry
130413878 CDS
T09616
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw02010
ABC transporters
tdw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130413878 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130413878 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdw02000
]
130413878 (abca1a)
Transporters [BR:
tdw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130413878 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
DUF7447
Motif
Other DBs
NCBI-GeneID:
130413878
NCBI-ProteinID:
XP_056595384
LinkDB
All DBs
Position
2:7611578..7638432
Genome browser
AA seq
2265 aa
AA seq
DB search
MVVFTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPHEQHECHFPNKA
MPSAGTLPWMQGIVCNANNPCFRHPTPGETPGMVGNFNDSIISRLFTDAKKILLYSQQDK
SFEGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSVFLEKNASLSEHAVKEIVEANVNLE
KVLIRGFGVHLSDLCNSTSLEDFVNIADKDVSQLTQNIICQSSTEWLNNAETHFLSNLDF
LKPIRKDVKSDPKIIQDVSMATDSLLDSLGALAVELASMKSWRDMRAEILYLTGNSTQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDHNYNALFGNHGNDSDEESASTYDNSSTPYC
NSLMTGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGGM
WEEIRPKIFNFMENSEEMDLVRTLLQNNASARFFNAKLVGTDWRVEDVSRFLSKASEDSR
PSGTSYTWREVFDETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDNRKFWAGI
VFPDMQLNTSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDMFLQVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVVILKMGNLLPYSDPG
VVYLFLTSFAIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGYGCEYFALFEEQGVGIQWSNLLSSPLEEDNYSLTTSISLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTTTVSNNKKENAEAKCIEEEPSHL
VPGVYIENLGKIYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRSDLNTIRQNLGVCPQHNVLFSMLTIEEHIWFYARLKGLPEEKVKAEMEQIV
NDLGLPHKRKCRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVAYFKGSLKKEDEVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARMVEDLGHEITYVLPYKYAKAGGFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGILPTRRNRRHAFGDHQSCLKPFTEDEFDCNDSEESRETDWLGGSDGKGS
YQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPS
LALKPSMYDEQFTFISNDAPEDGHTNRLLEALMDNTAHNEKCSDEQKSTSKSCLAGDAEW
MTAEVPESVQDMFLEGNWSMENPSPFCECSCEGRKRMLPECPPGAGGLPPPQIQVTSSET
LQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEINDAIT
HIRNRFSFKTGAAADRFLKGLSTFIRGLDTKNNVKIWFNNKGWHSIGAFLNVMNNAVLRS
NLPAGPERSKFSINAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVFL
IQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSSTNLP
VLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSINILIGINGSVSTFVLELFGGNEI
GGINNILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFAM
AVEGVVFFCITVLIQYRFCIKARSLSSKQPPIGEEDEDVARERQRILGGGGQTDILEIKQ
LTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDTVITSGEAYLAGKS
VLTEINEVHQKMGYCPQFDAINDLLTGREHLEFYAILRGIPEKEVCEVADWGIRKLGLTK
YVDRAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKEGRS
VVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSDPQLEPVM
EFIERKLPGSTLKEKHRNMLQYQLPSSLTSLARIFSILSKNKEQLHIEDYSVSQTTLDQV
FVNFAKDQSDEDHLKDISVNKGDAVVDISPLKAFLIDEKAIETVV
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atggttgtctttactcagttaggattactgctgtggaagaacttcacttaccgacggaga
cagactattcagctgctgatcgagataatatggcccctctttatcttcttcatcctgata
tctgtcagacttcactatcctccacatgaacaacatgaatgccactttccaaataaggcc
atgccctccgcaggaacgttaccctggatgcagggtatcgtctgcaatgctaacaaccct
tgctttcgccatcccactcctggagagacccctgggatggtgggaaacttcaacgactcc
attatctctcgactgttcaccgacgccaagaaaattctcctctacagtcaacaagacaag
agctttgagggattcaaaggactggttagggccttgagaaaactgcagagaaatactgaa
ggtttcaaactgaaggactttctgcgtgataatgaaaccttgtctgtgtttctcgagaaa
aatgcgtctctgtcagagcatgcagtgaaagagatagtggaggccaacgtcaacttggag
aaggttcttattagaggttttggagttcacctcagcgacctttgcaattctacgtccttg
gaggattttgtgaacatagctgataaggatgtgtcccagctgacacaaaacatcatctgt
caatcgtctactgaatggttaaacaatgcagagacccacttcctgtccaacctcgacttc
ctgaagccaatacggaaagatgtaaagtctgacccaaagattatccaagatgtgtccatg
gcaacagacagcctgctggacagcttgggagcattagccgtggagcttgcgagtatgaag
agctggcgagacatgcgagcagagatcctctacctgacaggaaacagcacacaatccccc
aaccacatgtaccaggccgtgtctcgcatcgtgtgcggtcacccggaaggaggcggcctc
aagataaagtccctcaactggtacgaggatcacaactataatgcgctgttcggtaaccac
ggcaacgacagcgatgaagaatctgcgtccacttacgacaactcctccactccctactgt
aacagccttatgacgggtttggagtccagtcccatttctcgcatgatctggagggctctg
aaaccattgcttatgggaaagatcttgtacacaccagatacacctgccacccagaggatc
atacatgaggttaacaagacatttcaagagttcggagtgctcagagatcttggtggcatg
tgggaggagataagaccgaaaatcttcaactttatggagaacagcgaggaaatggacctg
gttaggacactactgcagaacaacgccagcgcccgtttcttcaatgccaaactggtcggg
acagactggcgcgtggaggatgtgtccaggttcctgtccaaggcctcggaagactcacgc
ccctctggaacatcatacacgtggagagaggtcttcgacgagaccgatcaggccatacaa
accatctctcgatttatggagtgtgtaaacctggataaactggagccggtggccaatgaa
gaacgcttggtaaataaatccatgcgtctgttggacaaccgcaagttctgggctggaatc
gtgtttcctgatatgcagttgaacacatctgaactgccgccaaacgtcaactacaagata
cgaatggacattgataatgtggagcgcaccaacaagatcaaagacggatactgggaccct
ggtcctcgtgctgacccgtttgaagatttgcgctacatctggggcggattctcctacctg
caggatgttattgagcacggaatcatcagagcgctgacgggcagcaaagagaaaactgga
gtttacattcaacagatgccttatccctgctatgtggacgacatgttcctgcaggtcatg
agtcgctcaatgcctctgttcatgactttagcctggatgtactcggtagcgatcatcatc
aaaggtgttgtttacgagaaagaagcacgtctgaaagagaccatgaggattatgggtcta
gataatggaatcttgtggctgagctggtttataagtagtctgatacccttgctcatcagc
gccgctctactggtagtcatcctaaagatgggcaatctactgccttacagtgaccctggc
gtagtttacttgttcctgacttccttcgctattgtgaccatcatgcagtgtttcctcatc
agcacgcttttctctcgcgctaacctcgcggcagcctgcggaggcatcatatacttcacc
ctctacctgccctatgtgctgtgcgtggcctggcaggattacgtgggctttggggctaaa
gtggttgtgagcctcctgtcccccgttgcgtttggctatgggtgtgagtacttcgctctc
ttcgaggaacagggtgtaggcatacagtggagtaacctgctctccagccccctggaggaa
gacaactacagtctcaccacatccatctctctcatgctgtttgacgctgtgctgtacggc
atcatgacctggtacattgaagccgtgttcccgggccagtatggcatcccacgtccgtgg
tacttcccattcacaaagtcatactggtgtggggagaagtgtggctggacgacaacagta
tccaacaacaagaaagaaaatgctgaagccaaatgtattgaagaagagccatctcacctg
gttcctggtgtttacatcgagaacctagggaagatctatagtaacgggaaactggcggtg
gatgatttgactctgggcttttatgaaggccagatcacctccttcctgggtcacaacggt
gctggaaaaaccacaaccatgtctattctcactggtctgttcccacccacctcgggcaca
gcttacataatgggcaaagacatccgctccgatctaaacactatacggcaaaacctgggc
gtgtgtccacagcataacgtcctgtttagcatgctcaccatagaggaacacatctggttc
tatgctcgcctgaagggtttgcctgaggagaaagtaaaagcagagatggagcagattgtg
aatgatcttggcctgcctcataagcgcaagtgtcgcaccagtcagctgtcaggtggaatg
cagagaaagctatccgtcgctctggcatttgttggaggttcaaaggtcgtgattctagac
gaacccaccgctggagtggatccttattctcgccgaggcatctgggaccttctgctaaaa
tatcgtcaaggtcgcacgatcatcctctcaactcaccacatggacgaagctgatatcctg
ggagatcgcattgccatcatctctcatggaaagctctgctgtgtgggttcctcgctattc
ctcaagacccagctgggtacgggatactacttgacgctggtgaagaaagactttgatctc
tccgcaagctcttgccgaacatccagcagcacagtggcttatttcaaaggaagccttaag
aaggaggacgaagtgtctgagagcagttctgatgccggactgggcagtgaccatgaaagt
gaaacaaccacaatagatatctccctgatctccaacgtgattttcaagcacgttcccaca
gccagaatggttgaagatctgggtcatgagatcacttacgttctgccctacaagtacgct
aaagccggagggtttgtggagcttttccacgagatcgacgatcgactcaccgacctcggc
atttcaagctacggcatctctgatacaactctggaagagattttcctcaaagtcgcggag
gacaacggagtggatgctgaaatgtcagatggaattctacccacacggagaaaccgtcga
catgcttttggtgaccatcagagctgtctgaagcccttcactgaagacgaatttgactgc
aatgactcagaagaatcgcgtgagacagactggttgggcgggtctgatggtaaaggctcg
taccaggtgaaaggctggagtctgaagagacaacagtttgtggctttgctctggaagcgc
ttcctctacgcccgacgttcccgcaaaggtttctttgctcagattgttctgcctgctgtt
ttcgtttgcattgccctggtcttcagtctcattgttcctccatttggaaagtacccaagc
cttgctctgaaacccagcatgtatgatgagcagttcacctttatcagcaatgatgcacct
gaagacggacatacgaacaggttacttgaagcactgatggacaatacggctcacaatgaa
aaatgctcagacgagcagaaatcaactagcaagtcatgtttggctggggatgcagaatgg
atgactgcagaggttccagaaagcgttcaggatatgtttctggagggaaactggagcatg
gaaaacccgtcacctttttgtgagtgtagctgcgaaggacggaaaaggatgcttccggaa
tgtccgccaggagcaggtggtctgcccccaccacagattcaagtcaccagttctgaaacc
ttacagaatctgacaggcagaaatatttctgattacttggtgaaaacgtacgctcagatt
atcggcaaaagcttgaagaacaaactctgggtcaacgaattcaggtatggtggattctca
ttgggtgctagaagctcacaggccctcccgcctggtgatgagatcaacgatgccatcact
cacattcgtaatcgcttcagttttaaaacgggcgctgcagctgatcgctttctgaaaggc
ctgtcgacatttatccgaggacttgacacaaagaacaacgtaaagatctggttcaataac
aagggctggcacagcatcggagcgttcctcaacgtcatgaacaatgccgtcctgcgctct
aatctccccgctggccccgagcgctccaagttcagcatcaatgcgttcaaccacccgctc
aatctgaccaaagagcagctctcgcaggtggccctaatgacaacttcagttgatgttttg
gtgtccatctgcgtcatcttcgccatgtccttcgtgccagccagttttgtggtgtttctc
attcaggagagagtgaataaagcaaaacacatgcagtttatcagcggagtgcagcctttg
ctctactggctggccaactttgtctgggatatgtgcaactacattgtcccagcaactttg
gtcatcatcatcttcgtctgtttccagcaggaggcttacgtgtcctccaccaacctccct
gttctcgctctactgctgttgctctatgggtggtccataacacccctgatgtacccagca
tcattcttctttaagatccccagcacggcatatgtggttttgacaagcatcaacatcctt
attgggataaacggtagcgtgtccacgtttgtcctggagctgtttggcggcaatgagatt
ggcggcatcaacaacatcttgaagaatgtgttcttgatcttccctcacttctgtctgggt
agaggtctcattgacatggtgaagaatcaagccatggctgatgctctggagagattcggc
gagaatcggttccgttctcctctggcgtgggacatggtgggcaagaatctctttgccatg
gctgtagaaggcgtggttttcttctgtatcaccgtcctcatccaataccgtttctgcatc
aaggccaggtcacttagctctaagcagccgccaataggagaggaggatgaagatgtggcc
agagagaggcaaaggattctgggaggaggcggacagactgatatcctcgagatcaagcag
ctcacaaaggtgtataagaggaaacagaaaccagctgtagacagactgtgtgtgggcatc
ccaccaggagagtgttttggtttgcttggtgtgaacggagctggaaagacgagcacattc
aagatgctcacaggagatactgtaatcactagcggagaggcctacttggctggcaagagc
gtgttaacagaaatcaatgaagtccatcagaaaatgggatactgtccacagtttgatgcc
atcaatgacctgctaaccggccgagaacatctggagttttacgccattctgaggggcatc
ccggagaaagaagtgtgcgaggtggcagactggggtattcgtaaactggggctaacgaaa
tatgtcgacagagcagcgggaagctatagtggaggaaacatgagaaaactctccaccgct
atggcgctcattggaggcccacctgtagttttcctggacgaacccaccactgggatggac
cccaaagcccgacgggcgctgtggaactgcatcctcagcatcattaaagagggacgttca
gttgtcctgacatcacacagtatggaggagtgtgaagctctctgcactcgtatggccatt
atggtcaacggcaggttccgctgtctgggcagcgtgcagcacttaaagaacaggtttggt
gacgggtacaccatcatcctgcgggtggctggttccgatccgcagctggagccggtgatg
gagtttattgagaggaagctgccgggcagcaccctgaaggaaaaacacagaaacatgctg
cagtaccagctgccgtcctcccttacctccctcgcccgcatcttcagcattctctctaag
aacaaagagcagctccacatcgaggactactccgtctcacagaccaccttagaccaagtg
tttgttaattttgccaaggaccaaagtgacgaggaccaccttaaagacatttctgttaac
aaaggcgatgccgtggtggacatttcccccctgaaggctttcctcatagacgagaaggcc
atagagactgtcgtgtga
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integrated database retrieval system
