Triplophysa dalaica: 130413954
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Entry
130413954 CDS
T09616
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
tdw
Triplophysa dalaica
Pathway
tdw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130413954 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130413954 (myo5c)
04131 Membrane trafficking [BR:
tdw04131
]
130413954 (myo5c)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130413954 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130413954 (myo5c)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130413954 (myo5c)
mRNA cycle factors
P-body specific factors
130413954 (myo5c)
Membrane trafficking [BR:
tdw04131
]
Others
Actin-binding proteins
Myosins
130413954 (myo5c)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130413954 (myo5c)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130413954 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
130413954
NCBI-ProteinID:
XP_056595492
LinkDB
All DBs
Position
24:complement(2128883..2141157)
Genome browser
AA seq
1744 aa
AA seq
DB search
MALSELYTKYNRVWIPDIEHVWKSAEILKDFQPGDTELELQLEDGTELQYPLEGGEKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKIRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
TVSKSSGNNRVEEKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADQPEFKSLRLLSAEEFNYTSMGGEIEIEGVDD
RADMTETRRTFNLLGLKESFQTDVFKVLAGILHLGNTVIKAQNSEKSSVNSSDPHLSIFC
DLMGVNMENMCRWLCNRRIVLSAETVVKPQPRERAINARDALAKHTYAHLFDCVIHKINK
ALKVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNFLGSKAMFEKPR
LSNDSFVIQHFADKVEYRCIGFLEKNRDTLYEELVSIMRNSQFSLLAEFFQGEKEPNSAH
KNIKVTPAQPRIKGSNKQLKSTVGDKFRSSLYLLMETLNATTPHYVRCVKPNEEKLPFEY
DSKRVVQQLRACGVLETIRISAQSYPSRWTYNEFYSRYSILMGQSELKSGEKKQTCRMVL
QRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDHLRAACVTIQKHVRGWRQRRRFLHMRE
AAVTIQQYIRGKRKIRCTVTALALKQGWAAMVIQRHCRGYLVRKVYQLVRIATITIQAFT
RGWKARKRYKKMIEEHKALILQKYARAWLVRRRFQTMRRLVLNVQLSYRVQKLRKKVEEQ
SKENMSLMERVTSLSNAHSHGMEKIQALEAERSKVSNERAALEENERKNKEKANQAIAVL
QNEKEKLVQVNKVLEQRLKDTTQQMGDNFEVMKTKLIEDLEREERLRKVAEHSSELQKED
TEKEIETLKEENRRLREERVRLQAQLQEDQHIYTEMQEQLQQLTKHVKVIPDLRKEINSL
QMQKEEADKTIKAQNQQARAKISVITRQLLGEASEEELIRRLHEEDVDNNGEIDLLAAFD
GMEKAAKVMENQLREQKEAYGSRVETLEFKNEHLNKENGQLQALFQEKNNVNQSIAEEVA
RLTADNMVIPELKQQVSELTRNKQELETQLQDQSTEMTNKMKELSKDLQLGVEEERSQRR
HLEERILEMERSKDVMERQIVELQEENQQLQKSHQSESEAKSRLREETSRLTAENMDFEE
QQDMKDRLIKRLQDQIKALHTTASQKEAPAVPKEYLGMLEYKKEDESKLVRTLILDLRPR
GVGVHIIPGLAAHLLFMCVRHADYLNDGNKLKSFMHAIITAVKETVTKHLENFQILSFWL
SNTYHFLNCLKQYSGEEEFMKHNTPRQNKNCLKNFDLSEHRQILSDLAINIYHQFISVME
DALYPMIIPGMLEHESLQGISSMKPTGFRKRSSSVYEDRDDRARGEPFSVTSLLQQLSAF
HTCMDQQGMETQLQGQVIRQLFYLIGSTSVNSILLRKDLCSCRKGMQIRCNISYLEEWLR
EKDLQGSNAMETLGPLSQVAWLLQVNKTADEDAAEIKQRCSELSSVQIVKILNSYTPIDD
FEKRVAPSFVRKVQALLQEREGSSQLMMDAQYRFQVTFPFCSSPQALELLQVPSGLHLDF
VTLI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggagttgtacacaaagtataacagggtttggatccctgacattgaacat
gtgtggaaatctgcggaaatcctcaaagatttccagccaggagacacagagctggaatta
cagctggaggatgggacggagttgcagtatcctctggaagggggtgagaagttgcctcct
ctccgtaaccccgacatcctggtgggggagaatgacttgacggctctcagctacctccac
gaacccgccgtcctacacaacctcaaaatccgatttgtcgagtccaaaataatctacact
tactgtggtattatccttgtggcggtcaatccttacaaacagcttcccatctatggagat
gcggtcatccacgcgtactccggccaaaacatgggtgacctggaccctcacatatttgca
gtggctgaggaggcttacaaacaaatggccaggaataacaagaatcagtccattattgta
agcggcgagtcaggagctggaaagaccgtatctgctcgctatgcaatgagatattttgct
acggtgagcaagtcaagcggcaacaatcgagtggaggaaaaagttctggcgtccaacccg
atcactgaagctattggaaatgcaaaaacaaccaggaatgataacagcagtcgctttggg
aagtacactgagataagcttcgacaaaagataccaaattattggtgctaacatgaggaca
tacctgctggagaagtcaagagtcgtgtttcagtcagagaatgagaggaattatcacatc
ttttatcaaatgtgcgcttgtgcggatcaaccggagttcaaaagcttgagactgttgagt
gcagaagagtttaactacactagcatgggtggtgagatagagattgagggtgtggacgac
cgagctgatatgacagaaacacgcagaaccttcaacttgctgggtcttaaggagagtttt
cagacggatgtctttaaggttcttgctggaattctgcacttaggaaacacagtcatcaag
gctcaaaactcagaaaaatcttccgtcaattccagtgaccctcacctgtccatattctgt
gacctaatgggcgtcaacatggaaaacatgtgtcgctggttatgtaatcggcggatcgtg
ctatcagctgaaaccgtggtcaaaccgcagccccgggagcgggccatcaatgcccgtgac
gccctggcgaaacacacctacgcccatcttttcgactgcgtcatccacaaaatcaacaag
gcactaaaggtccctgggaaacaacactcatttattggggtgttggatatttatggattt
gagacgtttgatgtgaatagtttcgagcagttctgcattaactacgccaatgagaaactg
caacaacagtttaacctgcacgtgtttaaactggagcaagaagaatacatgaaagaggac
attccctggacgctcatcgatttctacgacaaccagcccgttattgatcttatcgaggct
aaaatgggaattttggacctgctggatgaggagtgtttgttccctcaaggaaccgataag
aattggctgcaaaaactgtacaattttctaggctcaaaagcgatgtttgagaaaccacgc
ctgtcgaacgactcttttgtgattcagcattttgccgacaaggtggaataccgttgtata
ggttttttggagaagaacagagacactctttatgaagagctggtcagcatcatgcgcaat
agtcagttttctctcttagctgaattctttcaaggagagaaagaaccaaattctgctcac
aaaaatataaaagtgacaccggcgcaacccagaatcaaaggttcaaacaaacagctgaag
tccactgtaggagacaagtttcgcagttctctgtacctgttaatggagacactaaacgca
accacgccgcattatgtgcgctgcgttaaaccaaatgaagagaaactgccatttgagtac
gattccaagcgtgtggtacagcagctgagggcctgtggagtcttggagaccatccgcatc
agcgcccaaagttacccatccaggtggacatacaatgagttttacagccgttacagtatt
ttgatgggtcagtcggagctgaagtcgggagagaagaagcagacgtgcaggatggttcta
cagaggctcattcctgactccaaccagtacaagtttggtcggaccaagatcttcttccgg
gcgggacaggtggcgtacctggagaagctgcgtttggatcatctccgtgccgcatgcgtg
accatccagaaacacgtgaggggctggaggcagagacgcaggttcctgcacatgagagaa
gcagctgtcaccatccagcagtacatccggggcaagagaaagatcaggtgcacggtgacg
gcattggcattgaagcagggctgggccgctatggtcattcagagacactgtcgcgggtat
ttggtacggaaagtttaccagctcgttcggatcgctacaatcaccatacaggccttcacc
agaggatggaaggcccgcaagcgctacaaaaagatgatagaagaacacaaggctttgatt
ttgcagaagtacgctcgagcttggctggtccgccggagatttcagaccatgcggaggctg
gtcctgaacgttcagctctcgtatagagtccagaagctgcgcaagaaagtggaagagcag
agtaaagagaatatgagcctgatggaaagagtcacaagtttgtccaacgcacattcacat
ggaatggaaaagattcaggcgttggaggcggagcgtagcaaagtatccaatgagagggcg
gctttagaagagaatgaaagaaaaaacaaagaaaaggccaatcaggcaattgctgtgctt
cagaatgaaaaagagaaacttgtccaggtgaataaagttttggagcagagactgaaggac
acgacgcagcagatgggagataactttgaggttatgaagacaaaactgatagaagattta
gaaagagaagaaagactgagaaaagtggcggagcacagcagtgaactccagaaagaagat
acagagaaagagatagagactcttaaagaggagaaccgcagactgagagaggagagagtc
cgacttcaggcacagctgcaggaagatcaacacatctatacagaaatgcaggaacaactg
cagcagctcaccaaacacgtcaaggtcataccagatttacggaaagaaataaacagcctg
cagatgcagaaagaggaagctgacaaaacaatcaaagctcaaaatcaacaagcacgagct
aagataagtgtgattaccaggcagctgctgggtgaagcttcagaggaggagttaatacgg
aggttgcatgaagaagacgtcgataataatggtgaaattgatcttctggctgcatttgat
ggaatggagaaggctgctaaagtgatggagaaccagctccgtgaacagaaggaagcttat
gggagccgtgtggaaacactggagtttaaaaatgaacatttaaacaaagagaacggacaa
cttcaagctctctttcaggagaagaacaacgtcaaccagagcatcgcagaggaagtggcc
cgtctcactgccgataatatggtgattccagaactaaagcagcaggtgtcagaactgacc
cgtaacaaacaagagctggagacgcagctgcaggatcagagtactgagatgacaaacaaa
atgaaggagttgtctaaggatctccagctgggggttgaagaagagcgatcacagagaagg
cacctggaggagaggattctagagatggagagaagtaaagatgtgatggaaaggcagatc
gttgaacttcaggaagagaatcagcagctacagaaatctcatcaatcagaaagtgaagcc
aagagcagactgagagaggagacgtcacgcctcacagctgagaacatggactttgaggag
cagcaggatatgaaggatagattgataaagagactccaagaccaaatcaaagctcttcac
acaacagccagtcagaaagaagctcccgcagtgcccaaagaatacctgggaatgttggag
tataagaaagaggatgaaagcaagcttgtccggacgctcattttggatctgagacctcgt
ggtgttggtgtacatattatccccggtctggccgctcatcttctcttcatgtgtgtgaga
cacgcggactatctgaacgatgggaataaactcaaatccttcatgcatgccatcatcacc
gctgtcaaagagacggtgacgaagcatctggagaattttcaaattctgtccttctggcta
tcaaacacataccactttctcaactgcctcaaacagtacagcggagaagaggagttcatg
aaacacaacacgccgcgtcagaataagaactgcctgaagaactttgacttgtcagagcac
agacagattctcagtgacctcgccatcaacatttaccatcagttcattagcgtgatggag
gacgcgctctatcccatgattattcctggaatgttggagcacgagagtcttcaagggatc
tccagcatgaagcccacaggcttccgcaagcgatcaagcagcgtgtacgaggacagggat
gaccgcgcccgtggcgagcccttcagcgtgacgtccctcctgcagcagctctccgccttc
cacacctgcatggaccagcagggcatggagacgcagctgcagggtcaggtgatcagacaa
ctcttctacctgatcggatctacgtccgtcaacagcatcctgctccggaaagacctgtgt
tcctgtcgcaagggcatgcagatcaggtgtaacatcagttacctggaggagtggctgcga
gagaaagatctgcagggcagcaacgccatggaaacgctggggccgctgtctcaggtggcc
tggcttcttcaggtcaacaaaactgcggatgaagatgcagccgagatcaagcagagatgc
tcggaactttcatccgtgcagattgtaaaaatcctgaattcatacacgcccattgatgat
ttcgaaaagcgagtagctccgtcttttgtccgcaaggtgcaggcgttgctgcaggagcgt
gaagggtcgtctcagctgatgatggatgcacagtaccgtttccaggtcacgtttcccttc
tgctcctccccgcaagccttggaacttctacaggttcccagcggcctccatttggatttt
gtcactcttatttga
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integrated database retrieval system
