Triplophysa dalaica: 130413962
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Entry
130413962 CDS
T09616
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130413962 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130413962 (thoc5)
03041 Spliceosome [BR:
tdw03041
]
130413962 (thoc5)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130413962 (thoc5)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130413962 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
130413962
NCBI-ProteinID:
XP_056595509
LinkDB
All DBs
Position
24:1813909..1822963
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AA seq
725 aa
AA seq
DB search
MSSDIVKKRKPKVIRNESSNVTPENKRVREGDQLSAVRSHVKVRKVRLREVQVTCPAGSL
PVGQRRPFAGKNQDARVYNEEAELEGRDAQQDYTLYKDTCGALATLMAEIQELKASGAKD
GNVEIEERRRQSSVHFITLKKLNRLAHMRLKKGRDQTHDTKQRVDVLHLQLQNLLYEVMH
LQKEIGKCLEFKSQHEEIELVSEEEFFKEAPEAISRPHVTRDDNHQLTLARLDWELEQRK
RLAEQYKTSLASKEKIHKAIEQKKEYLGSLQPGLQNIMQASVPVQEYLSMPFERMQKQAE
VARHLPPPLYVLLVQASAYGQACDKNLSVSISGDVDEAKALSRPPEDSQDDESDSDAEEE
QQNTKRRRGTVGVQLDDKRREMLRRHPLSLCIDLKCKDNSVLHLYFYYLMNLNILTVKSN
VSTSVDLSGAISTGDLMNPDNLLNCLYASDLGRETPNPANRYQFDKVGISTFEDYISDLG
HPYVWVQKLGGLQFSTDNVKAKLTRNALSASHMERTIKLLRGRLQSRLALHKQFSSLEHS
IIPVSSECQHLFPAKVVTGLTRWTMISYQEFTELGFVQHLLKAGLALETDLFFMAVLERG
TARLLAALALNPRYPEVTPLFSLSLQWKGEGSGRTDDNLRAIESEVNVFCAELQGPRPGL
QLLTNQIQRLCVCLDVYLETENQVCDGSEGPKEFPREKMCLRTARGPSRLKPFKYNHPQG
FFSHR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacattgtgaaaaagagaaaaccaaaggtgatcagaaatgaaagcagtaac
gttactccggaaaacaaacgggttcgagaaggagatcagctcagtgcagtcaggtcacat
gtcaaagtgaggaaggtcaggttgagggaggttcaggtcacgtgtcctgcaggatctctt
cctgttggacaaaggaggccctttgcaggaaagaatcaggatgcgcgtgtatataatgag
gaagcggagctggagggcagagacgcgcagcaggattatactctgtataaagacacatgt
ggcgctctcgctacactgatggcagaaatccaggagctaaaagccagtggtgctaaagac
gggaatgtggagattgaggagagacgcaggcagagcagcgttcatttcatcactctgaag
aaactcaaccgccttgcgcacatgagactgaaaaaaggacgagatcagacacatgataca
aagcagcgtgtggatgttcttcaccttcagcttcagaatctgctctatgaggtcatgcat
ctgcagaaagagatcggcaaatgtctcgagttcaagtcccagcatgaggagatcgagctt
gtcagcgaggaggagttcttcaaggaggctccagaggcgatctcacggcctcacgtcact
cgagacgacaaccaccagctcacgctcgctcgactggactgggagttggagcagaggaag
aggttggcggagcagtataagacgtcgctggccagtaaggagaagatccacaaagctatt
gaacagaagaaagaatatctgggcagccttcagcctggactgcagaacatcatgcaggcg
tctgtaccagtccaggagtatctttctatgccgttcgagcgcatgcagaagcaggccgag
gtggcacgacaccttccgcctcctctctatgtgctgctggtgcaggcgagcgcttatgga
caggcgtgcgacaaaaatctgtcagtgagcatcagtggagacgtggacgaggccaaagct
ctttccagacctccagaagactcacaagatgatgagagtgactcagacgctgaggaggag
cagcagaacacaaagcgtcggcgagggactgttggcgttcagctggatgacaagcgtcga
gaaatgttaaggcgtcatcctctctcgctctgcattgacctcaagtgtaaagacaacagt
gtcctgcacctgtacttctattatctcatgaacctcaacattctcactgtgaagagcaac
gtttccacttctgtggatctgtcaggagccatcagtaccggggatctgatgaacccagac
aatttgctcaactgtctgtatgcatctgatctaggccgggagacgcccaaccctgccaac
cgctaccagtttgataaagtcggaatcagtacgtttgaggattacatctcagatttagga
catccgtatgtttgggtgcagaaactaggcggcctgcagttctccactgacaacgtaaaa
gccaagctgactcgtaacgctctgagcgccagtcacatggagaggaccattaagcttctc
agaggacgtctgcagtccagactggccctacacaaacagttcagctctctcgagcacagc
atcattcccgtgtcaagtgagtgtcagcatctcttccccgctaaagtggttaccggcctc
acgcgctggaccatgatcagctaccaggaattcactgagctgggcttcgtgcagcatttg
ctgaaggccggtctggcgcttgagacggatctcttcttcatggctgtgttggagagagga
acagcacgtcttctggccgctctggcgctgaaccctcggtatcctgaggtcacacccctt
ttctccctctccctccaatggaaaggggaaggaagcgggcgcacagacgataacctacgg
gcaattgagagtgaggtaaacgtcttctgcgcagagctgcaggggccacgtccaggcctc
cagcttctgaccaatcagattcagcgtctgtgcgtgtgtctggatgtgtacctggagacg
gagaatcaagtgtgcgatggttcagaaggacccaaggagttccccagagagaagatgtgc
ttgagaaccgccaggggtcccagtcgtctgaagccctttaagtacaatcatcctcagggt
ttcttcagtcaccgctga
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