Triplophysa dalaica: 130414029
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Entry
130414029 CDS
T09616
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130414029 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130414029 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130414029 (si:dkey-219c3.2)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130414029 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
130414029 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130414029 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
130414029
NCBI-ProteinID:
XP_056595621
LinkDB
All DBs
Position
24:7833600..7868868
Genome browser
AA seq
979 aa
AA seq
DB search
MMSLHYPQCLCCKTTHAQCAHLKRLSKMAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLG
GQNKSVGDIRRPGSSSSAINPHLGKLLPAQVGTTLEQQRQSERNQEGKSLENGPDRIQAS
LSVPSASNLSNNSASLVTATNRAQYHSAGTAASNPSTLSASCSSDAAATDSHPNTNHIRT
APARIQSLNGSSGTLNSSVIASAPASVAGLQVEARPGSVNGIDIGSGVGKSNMSAPNNTN
TAFVSAQPSSTLPQPLDSQANPTIALHRPPNTITGVVHNGGDPKVSGLALGSTSVALTNT
EPKSDPQSQIKAIVPNQLPVAPVGLHPSTPTQIIVSSAMQVSPVVTSLPVASTPSALAKP
ATTTLVGQPTTLLRPGTPTQGTATGIPQQRLGAPTTQLVVRPQQQNIQLPPGFTIPPGMV
LVRTEVGQLVLVPQQVLAQVKAQNQNKGTLSPRPATPTAVAPFRVTTSVAQQKTAVVTIT
SAQKPTTTVITAGARVQPAPQTVLKPSLTPQSPTTTSAAIPVNRGPVLSQEMQENVKKCK
NFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTNRLQTELKSSPQPYLIPFL
KKSLPALRLTLLNSQQSLTQLSQTSTTSTVNTIKAPVPSALTSTVSSIRPATVMAPSASV
AVKRPGMQATPTRMPIVFTQAVRAQGAAGTHVQMRTPMGVAFQASANQKQKLNDPGGGTF
RDDDDINDVASMAGVNLNEENARILATGSELVGTQIRSCKDEAFLPASLLHKRLLETAKK
FGVMEVSMETVTLISHATQSRLRSMLEKVSAVAQHRTDSCKDEDLYEQASDVRTQLKFFE
HLERMEKQRKDDEEREILMKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTA
LAAIGPRKKRKLDSPGASAGAEFPAGSSGSAAGSTSSSSSSVRQTRQRITRVNLRDLIFC
LEQERTTARSMLLYKALLK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattacactacccacaatgcctctgctgcaaaacaacgcacgcgcagtgcgca
catctcaagcgtctctcaaagatggcgggcgtccccgatccactggaagatatgctctac
tccgaagtggacgagaaagccgtcagtgacctcgtaggctcgttagaatcgcagctcggc
ggacaaaacaagtcggtgggcgatataaggagaccgggttcatcctccagcgcgataaat
ccacacttgggaaaattgctgcccgcccaagtaggaacaacactggagcagcagcgccag
tcagagcgaaatcaggagggaaagtctctggaaaacggtccggacaggatacaggcgtct
ctttctgtcccgtccgcctcgaacttgtctaataactccgcatctttggttaccgctacg
aatcgggcgcagtatcattcagcgggaacggcggcatcaaatccatcaactttgtccgcg
agctgttcaagtgacgcagcagcaacggactctcatcccaacacgaatcacatccggacc
gctcccgccagaatacagagtttgaacggaagcagtggcacgttgaactcttctgtaata
gcgtctgctcccgcctctgtggcgggattgcaagttgaagccagacccggcagtgtaaat
ggtattgacattggttcaggtgtaggtaaaagcaacatgtctgctcctaataacacaaat
accgctttcgtgtctgctcagcccagtagcacactgccacaaccattagacagtcaagca
aatcccaccattgcactgcacaggcctcctaataccatcacaggtgttgtacacaatgga
ggtgaccccaaagtctcaggattggctctcgggtccacttccgtggcattaacaaacact
gagcccaaatctgaccctcaaagccagatcaaagctatcgtcccgaaccagctccccgtt
gctcctgtaggtttgcaccccagcacgcccactcagattattgtgtccagtgcgatgcag
gttagtccggtggtgacctcacttcctgtggcaagcactccctctgcactcgcaaagcca
gcgacgacgaccctcgtaggccagcctacgaccctgttgaggcccggcacgccgactcaa
gggacggcgaccgggataccccagcagcgcttgggggcacctacgactcagcttgtggtc
aggccgcagcagcaaaatatccagttacctccaggattcactataccgccaggcatggtt
ctggtacgcacagaggtgggtcagctggtgttggttccccagcaagtcctggcccaggtc
aaagctcagaatcaaaataagggcacgctgtctccgagacctgcaacacctacggccgta
gcacccttcagagtcaccacatctgttgcccagcagaaaacagcagtggtaacaattacc
tcagctcagaagcctaccaccacagtcattacagcaggagcccgtgttcaacccgcaccg
cagacggtcctcaaaccctcactgaccccacagagtcccaccacgacttccgctgccatc
cctgtcaacagaggtccagtcctctctcaggaaatgcaagagaatgtgaagaagtgcaaa
aacttcctagcaacgctcatcaaacttgcatcccacaattccccctcaccagaaacatcg
aagaatgtgaaggcactagtgcaagatctgctggacgcaaaaatcgaaccagaggagttt
acgaatcgcctgcagacggagttaaagtcatctccccagccctacctgatcccttttctt
aagaaaagcctgcctgctctgcgtctcactctactgaactcgcaacagtctttaacccag
ctctcccaaacctccaccacctccacagtcaataccattaaagctccagtgccgagtgcg
ctgacctccaccgtatctagcataaggccagccaccgtaatggctccatctgcctctgtg
gctgttaagagacccggaatgcaggcgactccaacgagaatgccgattgtgttcacacag
gcagtccgtgctcaaggtgctgctgggactcacgtgcaaatgaggactcccatgggtgtg
gcttttcaagcctcggccaatcagaagcagaagctgaatgaccctgggggtgggactttc
agggatgatgacgacatcaatgatgtggcgtccatggccggcgtgaacctgaacgaggag
aacgcccgcatcttggccacgggctccgaactggtgggcacccagatccgttcctgcaaa
gacgaggccttccttcccgccagcctgctccacaagcgtctcctggagactgccaagaag
ttcggcgtgatggaggtgtcaatggagacggtcactctgatttctcacgccactcagtct
aggctgcgctccatgctggagaaggtctcggcagttgcgcaacatcgcacggactcctgc
aaagatgaggatctgtacgagcaggcgtcagatgtgaggacccagctgaagttctttgag
cacctggagaggatggaaaagcagaggaaagacgacgaagagagggagattctgatgaaa
gccgctaaaagtcgctcaagacaagaagatcccgaacaagcccggctcaaacagaaagct
aaagagatgcagcagcaagaactcgcccagatgagacaacgggacgccaacctcacagcc
ctcgccgccattggaccccgcaagaaacgcaagcttgattccccaggggcctcagcggga
gcagagtttcctgcgggttcctcaggatcggcggccggctctacctcatcttcctcctcc
tcagtccggcagacccgtcagcgcatcacccgggttaacctcagggacttgatcttctgc
ttggagcaggagcgaaccacagccagatccatgctgctctacaaggccctcctgaagtag
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