Triplophysa dalaica: 130414043
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Entry
130414043 CDS
T09616
Symbol
lingo1a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130414043 (lingo1a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130414043 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
130414043
NCBI-ProteinID:
XP_056595644
LinkDB
All DBs
Position
24:2956923..3020449
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AA seq
615 aa
AA seq
DB search
MVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNAQERAVMCHRKKLISVPE
GIPLETRHLDLSKNRIKTINPDEFSAFPNLEVLELNENTISSIEPGAFNNLYGLRALGLR
SNKLKLIQLGVFTGISNLTNLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTXCPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTTIPYLALRHLVYLRFLNMSYNPIQIIEGNRL
HDLLRLQEFHLVGGRLLMIEPYSFRGLNYLKILNVSSNSLTTLEESVFHSVGNLETLALH
DNLLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKQQKKFIDEGTTVHFVCQADGDPTPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLNVHSYSPDWPSQPNKTLAFISNQPNENGANGTKAM
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRKSDAGMS
SSGADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattctg
atcttgatgctgggcacggtgctgtccggctccgccacaggctgtccgtcacgctgtgag
tgcaacgctcaggagcgcgccgtcatgtgccaccgcaagaagctgatatccgttccagag
gggatcccgctggaaaccagacacctggacctaagcaagaatcggatcaaaaccatcaac
ccggacgagttttctgccttcccgaacctggaagtgttggagctcaacgaaaacaccatc
tcgtccatcgagccaggcgcttttaacaacctctacggcctgcgggctctgggacttcgc
agtaataaactaaagctcattcagctgggagtgttcacagggatcagtaacctaacaaat
ctggatatcagtgaaaataaaatcgtcattctcttggactacatgttccaggacctgtat
aacctgcgttctctggaggtgggagataatgatctggtcttcatatcccatcgggcattt
cacggcctcagtagcctcgagcagctcactctagaaaagtgcaacctgaccntctgtccg
acggaggcgtttacgcacctccacagcttggtcacgttgcgtttacgtaacctcaacatc
aacagcatcagagactacagtttcaaacggctgtaccgcctcaaggtgttggagatcgcc
aactggccctacctggacaccatgaccaccaactgcttgtacggattgaaccttacgtcc
ctgacgatcaccaacgccaacctgacgacgattccgtacttggctttgcggcatctggtg
tatcttcggttcctcaacatgtcctacaatcccatccagattattgaagggaaccggctt
catgaccttctccggttgcaggagttccacctggtgggtggtcggctgctgatgatagag
ccctactccttcagaggcctcaactacctcaaaatcctcaacgtgtccagcaactccctg
accaccctggaggagtcggtattccattcggtgggcaacctggagaccctcgcgttgcat
gataacctgctggcttgcgattgtcgtctcctctgggttttccgacgccggtggaggctc
aatttcaaccgtcagcagcccacctgcgcctcgccggagttcgttcagggtaaagagttt
aaagacttccctgatgtccttcaacccaattattttacttgtcgcaagtcgaggattcga
gaccgcaagcagcagaaaaagttcatcgacgagggcaccaccgtccacttcgtgtgccag
gcggacggagacccgacgcccgtcattatgtggctgtccccacagaaacagttcatcacc
accaaaacgataggacggctgacggttttcccagacgggacgctggaagtgcgctacgct
cagattcaagacaacggcacatacgtgtgcatcgctagcaatgcgggtggaaacgacact
gctttggcccacctcaacgttcatagttactccccggactggcctagtcaacctaacaaa
accttggcattcatctccaaccaacctaacgaaaacggagccaatggaacgaaagcgatg
gtcccgtttccgtttgatataaagacgctaatcatcgccaccaccatgggtttcatctcc
ttcctgggcgtggttctgttctgcctagttttgctttttctgtggagcagaggcaaaggg
aacagcaaacacaacattgagatcgagtacgtgccgcgcaagtcggacgctgggatgagc
agcagcggtgccgacgcccctcggaaatttaacatgaaaatgatataa
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