Triplophysa dalaica: 130414060
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Entry
130414060 CDS
T09616
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130414060 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130414060 (lamb1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Alanine_zipper
BNR_6
Motif
Other DBs
NCBI-GeneID:
130414060
NCBI-ProteinID:
XP_056595689
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All DBs
Position
24:complement(13283472..13315787)
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AA seq
1790 aa
AA seq
DB search
MNLENMLVHLTSILCLWSWALADVPGFGDVCTEGSCYPATGDLLIGRAHQLSASSTCGLL
RPEPFCIVSHLQEQKKCFVCDSRKSYNESARPITGHRIENVVTTFAPNRLKTWWQSENGV
ENVTVQLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYYAYDCEASFPRVS
PGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPVFRIDDPYSPRIQNMLKITNLRVKFT
KLHTLGDNLLDSRIEIKEKYYYSIYDMVVRGNCFCYGHASECAPVDGAGEVMDGMVHGHC
MCNHNTMGLNCEDCQDFYHDLPWRPAEGRNTNACKKCNCNLHSDSCHFDMAVYQASGNTS
GGVCDDCQHNTMGHKCQQCKPFFYQHPERDVRDPNICEPCNCDPVGSLYGGICDGMTDVS
FGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGTVPGGSPCDTDLGNC
YCKRLVTGQNCDQCLPQHWGLSNDMDGCRPCDCDHGGALNNNCSPQTGQCQCREHMFGRR
CDQVETGFYFIALDHYTYEAEDANFGPGVTIVPRPHPQDRSPSWTGIGFVNVPEGAYLEF
SIDNIPYSMEYDIVIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQIVSLHP
GSRYMVLSRPVCFEESLNYTLRLSLSLYSALSDIQSPYTLIDSIVLMPHCKNLDLFSGSG
SEGGDLMTNSAWETFQRYRCLESSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQG
SLSTVCDPSGGKCQCRTNVVGHNCDKCAPATFLFGPQGCRPCDCSPEGSVHDFCREATGQ
CECFPGAYGRQCDRCLPGHWGFPNCRPCTCNGHGEQCDPNTGQCLSCREHTTGHTCERCL
NGYYGDPVLGSGDHCRPCMCPDGPNSGQQFSSACYKNLESDQVFCVCNQGYKGTRCEECA
TGYYGNPHEVGGECRPCQCNNNIDMMDPLSCDARTGTCLKCLYHTEGEGCDRCKLGYYGN
ALNQNCRKCVCNIMGTAAETCPSQGNCNCDLSSGQCQCLRNVVGQHCDQCAPDTWNMASR
EGCEVCDCDPNHSSGTSCNEITGQCTCKPGFGGKSCRECRELFWGNPEVKCHACDCDPRG
IAEQQCNKIMGHCVCVEGVSGPRCDTCARGYSGEFPHCARCHQCFAEWDIIIGDLTNQTH
RLVQKVNTIKATGITGPYQSTINKVESSANSIRDILAQNPATEPLTEIQGLLEQAAALMA
EMNKNLNLTEESLSEISADNNSTYTKLNSLKEEAEKLKQTVKDLQEQVEFVKNSDIRGAG
ETVTRYYQQSQEAETHANASVSDPYNLVNQSAALRSETEDLMNQTKEEFNQRQEEFSKQL
DDLAGQLETLDLSELSEKMCGSPAGSENCVDSLCGGLSCVDAEGNRNCGGEGCDGITTLA
HNAWQKVKDFDLEIFSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLTKTNETKRRVDGSN
EELRQLIKQIRDFLTQDGADLESIEAVATEVLEMQVPTTPAQLYNLTEEIRERVSSLSDV
EDILNLSAADIMRAEALLEQAFKARKDATDVKETAGVVKEALQSAKQAQTSVSEALKHAT
ANIRGTQSLLVSVESETSDSELKLSNATRRLLQLESDVALMREKALNTSISVNSTEKNTE
SINQLNEQLRKELDSELKDKFSTVEKLITQKADGVAEARKKSKMLQQEAKDLLVQANHKL
KLLKDLEKSYDENQKVLEEKANELVELEKAVRDLLQEISHKVTVYSTCLF
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaaaatatgctggtacatctcacatctattttatgtctatggtcatgggct
cttgccgatgtacctgggtttggagatgtttgcacggaaggaagctgttatccagcaaca
ggagatcttctcatcggaagagctcaccaactatccgccagctcaacgtgtggtcttctg
aggcctgaaccgttctgtatcgtcagtcatttgcaggaacagaagaagtgctttgtgtgc
gattccaggaagtcctacaatgagagcgcacgcccaatcactggccacagaattgagaat
gtcgtgaccacgttcgcccctaaccgcctcaagacctggtggcagtcggaaaatggtgtg
gagaatgtcacagtccagctgaaccttgaggccgagttccacttcacccacctcatcatg
acctttaagaccttccggccggctgccatggtgatcgagcgttcatcagattttgggaag
acgtggcaggtgtaccgatactatgcctatgactgtgaggccagcttccctcgcgtctct
ccaggcccaatgaaaaaagttgatgacgttatctgcgattcgcgctactctgacattgaa
ccttcgactgagggcgaggtcatctttagggttttggatccagttttcagaattgatgat
ccgtacagtcccagaatccaaaacatgttaaagattaccaatctgagggtgaagtttact
aaactccacactcttggggacaaccttctggactcacgtattgagatcaaggagaaatac
tactactccatttacgacatggtggtcaggggtaactgtttttgctatggacacgcgtct
gaatgtgcccctgtcgatggagctggagaggtcatggatggcatggtacacggtcattgt
atgtgtaatcataacacaatgggtctgaattgtgaggactgtcaggacttttatcatgac
ctgccctggaggccagcagagggacgcaataccaacgcctgtaaaaagtgcaactgtaac
cttcactcggactcctgtcattttgacatggccgtgtaccaggcatcaggcaacacgagc
ggcggcgtgtgcgacgactgtcaacacaacaccatgggccacaaatgccagcagtgcaag
cccttcttctaccagcacccggaaagggacgtccgcgaccccaacatctgcgaaccctgt
aactgtgatcccgttggctctctctacggaggaatctgcgacgggatgacagacgtgtct
ttcgggctgatctcgggtcaatgccgctgtaagcccaatgtggaaggagagcgctgtgac
cagtgcaaacagggccattatggactcagtgaagatcccttgggatgccagccatgcact
tgcaacgctttaggaacagtaccgggcggcagtccatgcgatacagacttaggaaactgc
tactgtaagcgattggtcactggacagaactgcgatcagtgcctgcctcagcattggggt
ctcagtaatgacatggatgggtgccggccatgtgactgtgatcacggaggtgctctcaac
aacaattgttctcctcaaactggacaatgtcagtgtcgtgagcacatgttcggcagacgc
tgcgaccaggtggagactggtttttacttcattgcgttggaccactacacttatgaagca
gaagatgccaattttggacctggtgtaaccattgtcccgagacctcaccctcaggacaga
tctccttcttggaccggtattggttttgtgaacgttcccgaaggtgcctatcttgaattc
agcattgacaacatcccctactccatggagtatgacatcgtcattcgctatgaacctcag
ttgccagaacagtgggaggaagtcttgatgactgtcattaggcctcgcgtcatcaccgcc
gacagccgctgtgcaaacacaatgcctgatgatgacaaccagatagtatctcttcatcct
ggatccaggtatatggtgctttcccggcctgtgtgtttcgaggagagtttgaactacacc
ttgcgcttgagtctctctctctactcggctctcagcgacatccaatccccatataccctc
atcgattctatcgtgcttatgccccactgcaaaaacctggaccttttctctggctctgga
tcagagggaggggatttgatgaccaacagcgcctgggaaactttccagcggtaccgctgt
ctggagagcagccaagccgtggtgaaaacccccatgactgatatctgcagaaattacatc
ttcagcgtctcggcccttctgcaccagggagttaaagcgtgccagtgtgaccctcaaggg
tctcttagcactgtctgtgacccgagtggagggaagtgccaatgtcgaaccaatgtagtc
ggccacaactgcgacaagtgcgccccggccaccttcctatttggaccacagggctgccgg
ccctgtgattgtagtcctgagggatccgttcatgatttctgtcgtgaggccactggtcag
tgtgagtgttttcctggagcgtatgggcggcagtgtgatcgctgtctgcccggacactgg
ggcttccccaactgtcggccctgtacctgcaacggtcacggtgagcagtgtgaccccaac
actggacagtgtctgtcctgcagagaacacaccaccggacacacctgtgagagatgtttg
aatggatactatggtgaccctgtcctgggctctggagaccactgccgtccctgcatgtgt
cctgacggacccaacagcgggcaacagttctccagcgcgtgctacaagaatctggaatca
gaccaggtgttctgcgtctgtaaccagggatataaaggtactaggtgtgaagagtgcgcc
accgggtattatggaaacccgcacgaggtgggaggagagtgccggccatgtcagtgcaac
aacaacattgacatgatggaccccttgtcctgcgatgcccgcacgggtacctgtctcaaa
tgcctgtaccacacggagggcgagggatgcgaccgttgcaagcttggttactacggcaac
gcgctaaatcagaattgtagaaagtgcgtgtgtaacattatgggcacggctgcggagaca
tgcccctctcagggtaactgcaattgtgatttaagcagcggtcaatgccagtgtttgcgc
aatgtggtgggtcagcactgcgatcagtgcgctcctgacacctggaatatggccagcagg
gaaggctgtgaggtctgcgactgcgaccccaatcattcctcaggcacttcctgtaatgag
attactggccagtgcacttgtaaaccggggtttggtggcaaaagctgcagggagtgtaga
gaactcttctgggggaaccctgaggtcaaatgccatgcatgcgactgtgacccaagaggt
atcgcagagcagcagtgcaacaagatcatgggtcactgtgtgtgcgtggagggcgtgtcc
gggccccgatgtgacacgtgtgcccgcggttactctggcgagtttccacactgcgcccgc
tgccaccagtgctttgccgaatgggacataatcatcggcgacctcactaaccaaacacac
agactggtccagaaggtcaacaccatcaaagccactggcattacgggaccctaccaatcc
accatcaataaggttgaaagcagcgccaactcgattcgcgacatattggctcagaatcca
gccactgaaccactcacagaaatccaggggcttctcgaacaagctgcagccttgatggcg
gaaatgaacaaaaacctgaatctgacggaggagagcctgtccgagatctctgctgacaac
aacagcacatacaccaagctgaactctctcaaagaagaagctgagaaactgaaacagact
gtgaaggacctacaagaacaggttgagtttgtgaagaactcggacattcggggtgccgga
gaaaccgtaactcgctactaccagcagtctcaagaagcagagactcatgcgaatgcctcc
gtcagtgacccatacaacctggtcaatcagtccgctgccttacggagtgagacagaagat
ctgatgaatcaaacaaaagaggagttcaatcaaaggcaggaggagttttccaaacaactg
gatgatctggctggacagctggagactcttgatttgtctgagctcagcgagaagatgtgc
ggaagtccagctggctcggagaactgtgtcgactctctgtgcggaggcctgagctgtgtg
gatgccgagggaaacaggaattgtggaggagagggttgtgacggtatcaccacgctcgca
cacaacgcctggcagaaagtcaaagactttgacctggagattttcagcgctatggaggaa
gtggacaagctctccaaaatggtgtcagaagccaaggtcaaagcagacgaggccaagctg
aatgcccaggaagttttgacgaagaccaacgaaaccaagcggcgtgtggatggcagcaac
gaggagctgcgtcagctcatcaaacagatccgagacttcctcactcaggacggagctgat
ctggagagcattgaggcagtggccactgaagttctggagatgcaggtgcccacaacacca
gcccagctgtacaacctgacggaggagatcagggagcgagtgagcagcttgtcagacgtg
gaggacatcctgaacctgagtgcggctgacatcatgcgagcagaggccctgttagaacaa
gccttcaaggccaggaaagatgccacagacgtcaaagaaactgctggagtggtaaaggag
gctttgcagtcagccaaacaagcacaaacttctgtatccgaggccttaaaacatgccacc
gccaatatcagaggaacacaatcattgctggtatcggttgaatcagagacatccgattcg
gagctcaagttgagtaacgccacccgaagactcctacagttggaaagcgatgtagctctg
atgagagaaaaggctctcaacacctccattagcgtcaacagcacagagaaaaacacagag
agcatcaaccaactcaacgagcagctcagaaaggaactggattcagagctgaaagataaa
ttcagtactgtagagaagctcatcacacagaaagcagacggagtggcagaagccagaaaa
aaatcaaagatgcttcaacaggaggctaaagatctgctagtacaagccaaccacaaactt
aagcttcttaaagaccttgagaagagctatgatgagaatcagaaggtgttggaggaaaaa
gccaacgagctggtggaactagagaaagctgtgagggatctactccaggagatcagtcac
aaagttaccgtctacagcacctgcctgttttaa
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