Triplophysa dalaica: 130414142
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Entry
130414142 CDS
T09616
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130414142 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130414142 (nup160)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130414142 (nup160)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130414142 (nup160)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130414142 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
130414142
NCBI-ProteinID:
XP_056595854
LinkDB
All DBs
Position
24:complement(13509112..13579361)
Genome browser
AA seq
1396 aa
AA seq
DB search
MAGVLERSFIEICGFERETVSRFREITINIAGVGGHSSGAKHADSAGGFSYEDSGKLLSV
TSNRYIHWSTSGDTVQFVEQSLDTNLLNNAVRLRIPHCPLLPGGVHIQETLNNILILIAT
SQTVHRLVLPHPTHMYHSDLVTELQMQSIFTDIGKLNLKDPAHCYVLPFAQGSQPTGPST
TAAWISPQGEALFALGSPLGGIMIITLPPHDQEGTVSVVELKQSSVIQRIAGWMPTAIRG
DQSPYDLAISLVVHQLEDDTFVFALCQDHKLRMWSFKLQMCLLVTDMLEYMPVGSGEMRN
SPGQAHKLRLCFTSTTGLCLAVYLAVPNRSQFCVLQLVANENSRYSLDHISTLFSTQETL
VDFVLTATDVWGLWLDDDNQTVVKYISFEHNMAGMWNQVFVQPSPPEEVHTGEDQDPRET
YLDILFSPVRFSAAAIVKALQIYKRGTEGHFDLSWEELKKEVVVTLENELQASVTEYEFS
QEDYRLLQVEFWSKFYACCLQYQEVLSNPLALHVSPTTAMVCILKKAFVSFLLPCFAVDH
LYLSSDEYFFSEEETPIAEDSDMSRDILLLVQCLRQLNEYLTEDMAYEMEKALEHLLSPE
KTSEKVFEALLASDTATGIQDIANKLLDVRNPIGAMNLLLRELDLETDAETDNRPTTGQS
LRVRISLSQLYGSSVASSLICQGVCQTSMTRMLLCRDLLILQQLYLHLGDKIFPAGGSQL
LQLQQDLIPRCSHLLCTYHLLKQMSLTLSSSVPLDILNTDLQHLSVLELSDSTAPATNRS
VLSPQTVLELFYQNVARKVIVSQIFSHQDMMANESVLHWPQMISSVLTMLCQFLWPSNPS
FLFPECLMGNCQYAQLQEYVRLVGPWCQVNVGSCRFVLGQCYLANGEGQKALHCFQEAAA
EVEKEEFLMKLAGSDDETATTAPRLLYYNKVLRLLEDIGLPELVIHSATLAISEAVNDER
SQAALWTRIFKHHLDLGHNTQAYEALTQNPDSSRQLDCLRQLVVVLCERAQLRDLIQFSF
VNLHDEVVGIIESRARAVDLMTHNYYELLYAFHINRHNYRKAGTVMFEYGMRLGREVRTL
LGLQKQVNCYLAALNCLRLVRQDYAWIVQPSSGAVYERAGASPKRNYDGEMSGGPVNQQI
DILELKDLERDYILARSRLTLAQQDPSSAAIAGGASSVEMVTLLVQTGLFDTALMLCQTF
NLSLTPVFEGLTFKCINLQYKGDQDQTEAWNWLAANQLPSVITTKECSATDEAWRLLAYY
LEHHPSQNAEYHRCVISKLLSHSVPPPDWLVNAHKVIDAAALLRLYLNYDQLQSASELVL
EYVDAMLGKGYQYFGIERPLSATASLVWLPYTSIDQLLRSLSESQINEKMYKNLKDKLAE
YHRLVEQSSRHKLMAR
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgttctggagcggagcttcattgagatttgtggatttgaaagagaaactgtt
tcacggtttagagagatcacaataaatatcgcaggtgttggtggtcactcaagtggtgca
aagcatgcagacagtgcaggtggattctcttatgaggacagtgggaaactcctgtctgtc
accagcaacagatacatacactggtcaacttcaggtgacaccgttcagtttgttgagcag
tcgctggacaccaaccttctgaataatgccgtacgactgcgtatcccacactgccctctg
ctgccaggaggagttcacattcaggagacactcaacaacatattgatcctgatcgccaca
agccaaaccgtccatcggctagttttgccgcaccctacgcacatgtaccacagcgatctg
gtcactgaactccagatgcagtcaatcttcacagatatcggaaagctaaacctaaaggat
ccggcccactgttatgtcctcccattcgctcaaggctcacagccgacaggcccctccact
acggccgcttggatcagtcctcagggggaagcacttttcgctcttggttcacctttgggt
ggcattatgatcatcactttacctcctcatgatcaagaagggactgtgtctgtggtggag
ctgaagcagagttcagtgatacagagaatagcaggctggatgcccactgccatcaggggc
gatcagagtccgtatgatcttgccattagtctggttgttcaccagctagaagatgacacc
tttgtgtttgccctttgtcaggatcataagctcaggatgtggtcatttaagcttcagatg
tgtctcctggtgactgatatgttggagtacatgcctgtgggcagtggagaaatgaggaat
tctccaggacaggctcataaactccgactctgcttcacctccacaactggcctgtgtctc
gctgtttaccttgctgttcccaatcgcagccagttctgtgtgctgcagctggtggccaat
gagaacagccgatacagcctagatcacatctccacgctgttctcaacacaggagacactg
gtggattttgtcttgacagcgactgatgtttggggtctttggctagatgatgacaatcag
actgtggtgaagtacatcagctttgaacataacatggcaggcatgtggaaccaggtgttt
gttcagccctcaccaccagaggaagttcacactggtgaagatcaagacccacgggaaaca
tatttggatattcttttttcaccagtacgcttttcagccgctgccattgttaaagcttta
cagatttacaagaggggaactgagggacattttgacttatcgtgggaggagctaaagaaa
gaagttgtggtcacactggagaatgagcttcaggccagtgtgacagagtacgagttctct
caggaggactaccgcctgctgcaggtagagttctggtccaagttttacgcatgctgtctg
cagtatcaggaggttctgtccaaccctctcgccctacacgtcagcccaaccacagccatg
gtctgcatcctcaagaaggcatttgtgtctttcttgttgccctgttttgctgtcgaccat
ctttacctatcctctgatgaatactttttttctgaagaggagacgcccattgctgaggat
tctgatatgagccgagacatcctgctgctcgttcagtgtctgcgtcagttgaatgaatat
ctcacagaggacatggcttatgagatggagaaagcacttgagcacctgctgtctccagag
aaaacatctgaaaaagtctttgaggctctcttggccagtgacactgcgacaggaattcag
gacattgcaaacaaactgctagatgtccgtaaccctattggtgccatgaatctgctgctc
agagagctggaccttgagacagacgcagagactgataatagaccaactacaggtcaatct
ctacgagtgcggatcagcttgtctcagctgtatggcagcagtgtggcctccagtctcatc
tgtcaaggcgtctgtcagaccagcatgaccaggatgctgctgtgcagagacctgctcatc
ctccagcaactctacctgcatctgggtgacaaaatatttcctgcaggtggttctcagttg
ttgcagctgcagcaggacttgattcctcgatgctctcatttgctctgcacttatcacctt
ctcaaacagatgagcctgacgctgtcctcgtccgtccctctggacatactaaacacagat
ttgcagcatctgtctgttctggagctttcagactctacagcacctgcaaccaacagatca
gtgttgagtccccagactgtgctggagttgttctaccagaatgtggcacgtaaagtgatc
gtgtctcagatcttctctcatcaggatatgatggccaatgagagcgtattgcactggcca
cagatgatctcaagcgttctcacaatgctctgccagtttctctggccgagtaatcccagc
ttcttgtttcctgaatgccttatggggaattgtcagtatgcacaactacaggaatatgtt
cgattagttgggccgtggtgccaggtgaatgtgggatcctgtcgctttgttttgggtcag
tgttatctggctaatggcgagggtcagaaggcattgcactgtttccaggaagcagcggct
gaggtggaaaaagaagagtttttaatgaaacttgcgggatcggatgatgaaacagccacc
accgccccgcgattactctattataacaaggttctgcggttattggaagatattggtttg
ccagagcttgtgattcattcagccacactggccatatctgaagctgtaaatgatgagaga
agtcaggctgcactgtggactcgtatatttaaacatcatctggatctgggtcataacact
caggcatatgaagctctgacccagaacccggattctagcaggcagctggactgtctccgg
cagctggtggtggttctgtgtgaacgtgctcagctcagagatctcatccagttctccttt
gttaatttacacgatgaggtggtggggatcattgagtctcgtgcaagagcggttgacctc
atgactcataactactatgagctgctctatgcctttcatatcaatcgtcataactatagg
aaagcgggtacagttatgttcgagtatgggatgcgtctgggacgggaggttcgtactttg
cttggcctgcagaaacaggtgaactgttacctggcagccctcaattgtctgaggcttgtt
cgtcaggactatgcttggattgtacagccctcatctggagcagtttatgagcgagcaggt
gcatcaccgaagagaaactatgatggtgaaatgtctggtggtccagtaaatcagcagatt
gacatattggagctgaaggatttagagagggactatattttagctcgcagtcgtctgact
ttggcccagcaggacccctcctcagcagccattgcaggaggggcatcttcagtagagatg
gtgactctgctggtccaaacaggactttttgacacagctctcatgctgtgtcagaccttt
aacttatctctgacaccagtctttgagggactcacctttaagtgtattaacctacagtat
aaaggagatcaggaccagacggaggcgtggaactggcttgcggccaatcagctgccatct
gtcatcactaccaaagaatgcagtgcgacagatgaagcttggcgacttttagcctattat
ttggagcatcatccctcacaaaatgcggaatatcatcgttgtgttatcagcaagctactg
tcccacagtgtaccaccgcctgactggctggttaatgctcacaaggtcatagatgccgcg
gctctcctgcgtctctatctgaactatgaccaacttcagtcagcatctgagcttgtgctg
gagtatgtcgacgctatgcttgggaagggatatcagtattttggcatagagcgtccgctc
tctgctacagcatctcttgtgtggctaccctacacatctattgatcagctcttaaggagt
ctcagtgaaagtcagatcaatgaaaagatgtacaagaatctcaaagataaactagcagag
tatcacaggttggtggagcagagcagcagacacaaactcatggctcgttga
DBGET
integrated database retrieval system
