Triplophysa dalaica: 130414143
Help
Entry
130414143 CDS
T09616
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04350
TGF-beta signaling pathway
tdw04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130414143
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130414143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130414143
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
DCC/UNC5 family
130414143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
fn3_SORL1
Interfer-bind
fn3_2
CRLF2-like_D2
C2-set_2
Unc5_NetrinR_N
SusE
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
130414143
NCBI-ProteinID:
XP_056595856
LinkDB
All DBs
Position
24:80956..127601
Genome browser
AA seq
1419 aa
AA seq
DB search
MAGRGRALLVLFAGLTVFRFGGASKGVGIQSFTSFRFSVEPVDTLAVRGLPAVLNCSAVS
AAPVRVEWKKDGTFLNLAADDRRRQLPDGSLFISTVIHSKHNKPDEGVYQCVATILNLGT
ISSRTARLTVAGLPRFLSQPEGVSVRVGGTEMLNCEVTEELAPFTRWEKSGGAVDVDSRV
TQLSGGALVISNASQSDAGLYRCIIDGVGAAKTSEEAELQVSSDSTVEERLEVLRGPVAV
AKVVGEDVLLPCVMKGHPVPVIRWTFNGRPVDEGSERFAVIGGGSLQIVNLTEEDAGIYS
CQADGGNATNEIQAELTVLVPPSFLTRPSNTYAQESMDIVFECDVTGSPPPTVRWMKDGD
TVIPSDYFRIVEQHDLQVLGLVKSDEGFYQCLTENDAGNIQASAQLIILDLDVALHSALP
SLTDATADHVASGPVDGPVPSAPRDVVASLVSTRFIKLTWRLPAEAHGENITFSVFYSLN
GTNRERVENTSAPGEMQVTIQNLVPDTKYTFRVVSSNANGPGESSTPLTVATQPEVQLPG
PPPNVQVMSVGSTSVTLSWERPLTGNGEIHTYKLFCSETGQDSEQDTDVTQALSYTVTGL
KTFTEYTFRVVAYNRHGPGVSTEDVTVRTLSDVPSAAPQNVTLEVLNSTSIMVRWQPPPS
GSLNGELMGYKVRYRKGLRRADSMEITTTQLSQIIDGLERGKVYTFRVSAATENGSGPAS
EWTAAETFENDLDESQVPGMPSSLHVRPLVNRMVVSWTPPEDQEVLVRGYKMGYGLGSPH
AHTVALDYKQRFYSIDNLDAASHYVITLKAFNNMGEGIPIYNSATTRPQSDPADPDIDFY
ELFNNPYTPAPDPTPMLPPVGVQASVLSHDTIKVSWADNSLAKNQKITDSRYYTVRWKTN
IPANTKYKMANTTSLFHTVTGLKANTLYEFSVTVTRSRRSSTWSMTAHATTLETIPSSAP
KDVTVISKEGNPRIININWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVVGNRLTHQ
IQALTLDTRYYFKIQARNSKGTGPLSDALLFLTPKAEPSDKMSSDQGLQVKPGHPVPPGH
GIGSNIDKPGITGSHENHILVIVVIVSVGVFSIIAVVVGAVLCTRRSHSHQKKKRAACKS
ISSSSGSHKYKSSSKDLKPPDLWIHHERLELKPMDKSPEPNTVMTDTPIPRTAQDTPTEP
AHQRRGHDVEESVNTLAGRKAAKPKILMPFDSAPPQPVITAHPITSLDHLHPTPCGYLHH
QISLRVPATAKCVRNQASVPEPPLAPSQPASAAELQKTEALIKEVDLPSANPPTAHVRPT
HPLKSFAVPTVTVSAHTYDTTLPSIPLLTQPVAGVKMPSIGTLNRARAPVAVTVPSAPAQ
SETSKMLLQTDMTYETDELSEEMAHLEGLMKDLNTITTT
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggacgagcactgctcgtgctgttcgcgggtctcaccgttttccggttc
ggcggagcgagtaaaggtgttgggattcagagcttcacctccttcaggttctctgtggaa
cccgtggacacgttggccgttcgaggtctgcccgcggttctgaactgctctgccgtcagc
gccgctccggtcagggtggagtggaagaaggacgggaccttcctgaatctggcagcggat
gaccggagacgacagctgcccgacggctctctcttcatcagcactgtgattcactccaaa
cataataaacctgatgagggcgtctatcagtgtgtggccaccatcttgaatctgggcacc
atcagcagccgaacggccagactcacggtggcaggactgccgcggttcctcagtcagccg
gagggcgtgtccgttcgtgtgggcgggaccgagatgttgaactgtgaggttacggaggag
ctggccccgttcacgcgctgggagaagagcggtggagctgtggatgtggactctagggtc
acacagctgtccggcggagctctggtcatcagtaacgcctctcagagcgacgccggactt
taccgctgcatcattgacggtgtgggagcggccaaaaccagcgaggaggcggagctacag
gtgtcctcagactccactgttgaagaaagactggaggtcctccggggtccggttgccgtg
gcgaaggttgtcggggaggacgtgttgttgccatgcgtgatgaaaggtcatccagttccg
gttattcgctggacttttaacgggaggccggttgatgaaggcagtgaacgctttgctgtg
attggtggaggcagcctgcagattgttaacctgacagaagaggatgctgggatatacagc
tgccaggcagatggaggaaacgccaccaatgagattcaggcagagctgactgtgctggtt
cctccaagcttcctcacgagaccctccaacacttacgctcaagagtctatggacatcgtc
tttgagtgtgatgtcacaggctcaccgccgcccactgtcagatggatgaaagacggagac
acggtcatcccgagcgattatttcagaatagtggagcagcacgatctgcaggtgttgggt
ttggtgaagtcagacgagggcttttatcagtgtttaacagagaatgatgctggaaacatt
caggccagcgcacagctcatcatactggacttagacgttgcccttcattctgctcttcct
tcactgactgatgccactgctgaccatgtagcgtccggtcctgtcgatggccccgtcccg
tctgcgccgcgtgatgtggtggcgtctctggtgtccacgcgcttcatcaaactcacctgg
agacttcctgctgaagctcacggagaaaacatcaccttctccgtcttctacagtctaaac
ggcaccaacagggagcgtgtggagaacaccagcgccccgggagagatgcaggtcaccata
cagaacctcgtccctgacaccaagtacaccttcagggtggtctcctccaatgccaacggc
ccgggagagagctccaccccgcttacagtggccactcaacctgaggttcagctgccggga
ccgcctccaaacgttcaggtgatgtctgtgggctcaacatccgtcacactgagctgggag
agaccgctgacgggcaacggagagatccacacctataaactcttctgcagtgagacgggt
caagactcggagcaggacacagatgtgacgcaggctctgtcttacaccgtgacgggactc
aagaccttcacagaatacaccttcagagttgtggcgtataacagacacgggcctggagtt
tctacagaagacgtgactgtgcggacgctgtctgacgtaccgagcgctgctcctcagaac
gtcacactggaggtcctcaactcaacgagcatcatggtccgctggcagccgcctccgtcg
ggcagtttgaacggagagctgatgggatataaagtacgctatcgtaaaggactgcggagg
gcagattcaatggagatcacaacaacccaactctctcaaatcattgacggtctggagaga
gggaaagtttacaccttcagagtttcagccgctacagaaaacgggtctggaccggcctca
gaatggactgcagcagagacctttgagaacgatctggacgaatcacaggtgccgggcatg
cccagttctcttcacgtccgtccgctggtgaacagaatggtggtgagctggactcctccg
gaggatcaggaggttttagtgcgaggttataagatgggttacggtctgggcagtcctcac
gcacacaccgtcgctctggattataaacagcgcttctacagcatcgacaacctcgatgct
gcttcacattacgtcatcacactgaaggcctttaacaacatgggtgaagggattcccatc
tacaacagcgcaacaaccagaccacaatccgaccccgcagaccccgacattgatttttat
gaactctttaataacccatacaccccagcacctgaccctacacccatgctgcccccggtg
ggcgttcaagcttccgtcctcagtcatgacaccatcaaagtcagctgggccgacaactcg
ctggccaagaaccagaagatcactgactccagatattacaccgtcagatggaagaccaac
atccccgccaacacaaagtataagatggcaaacacaacgtctctgttccacacggtcacg
ggtctgaaggcaaacactctctatgagttctctgtgacggtgacccggagccgcaggagc
agcacgtggagcatgacggcacacgccaccacacttgagaccattcccagctcagcacct
aaagatgtgactgtgatcagtaaagaaggaaacccacgaatcatcaacatcaactggcag
ccgcccactgaagccaacggcaaaatcacagggtacatcatctactacagcactgatgtg
aacgccgaggttcatgattgggtggtggagccggtggtggggaatcgtctcactcatcag
attcaggctctgactctagacaccagatattactttaagatccaggccagaaactccaaa
ggcacgggtccgctgtctgacgcgcttctgttcctcacgcctaaagctgaaccttctgac
aagatgtccagcgatcagggtctgcaggtgaagcccggacatcccgtcccccccggtcac
ggcatcggatccaacatcgataagccgggcatcacaggcagtcatgagaatcacattctg
gtgattgttgtgatagtttcagtgggagtttttagcatcatcgctgtggtcgtgggggcc
gtcctgtgcacgcggcgatctcactcgcaccagaagaaaaaacgtgcggcctgtaaatcc
atcagcagcagcagcggctctcacaaatacaagagttcctctaaagacctgaaacctccg
gatctgtggattcatcacgagcggctggagctcaaacccatggacaaatcacctgagccc
aacacagtcatgactgacacacccattcctcggaccgcccaggacacgcccacagagcct
gcccaccagagacgaggacatgatgtggaggagagtgtgaacacactggctggtcgcaag
gcagcgaaaccaaaaatattgatgccatttgactcggcgccgccccagcctgtgatcacc
gctcaccccatcacttctcttgatcatcttcatcctacaccgtgtggttatcttcatcat
cagatcagtctgagagttcctgccactgcaaaatgtgtgaggaatcaggcatctgtacca
gaaccgccgctcgctcccagtcagcccgccagtgcagctgaactccagaagacagaagcg
ctgatcaaagaggtagacctgcccagcgccaacccaccgaccgctcacgttcggccgaca
caccccctcaagagcttcgccgtgccaacggtcaccgtctccgcccacacctatgacaca
acattacccagcatccctctgctgacacagccggttgctggtgttaaaatgccgtctatc
ggaacactgaaccgagcacgcgcaccagtggcagtaacggtccccagtgcacctgcccaa
tcagaaaccagtaagatgttgttacagacagatatgacgtatgagacagacgagctgtcg
gaggagatggctcatctggagggtttgatgaaggatctgaacaccatcactacgacctga
DBGET
integrated database retrieval system
