Triplophysa dalaica: 130414172
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Entry
130414172 CDS
T09616
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
tdw
Triplophysa dalaica
Pathway
tdw04620
Toll-like receptor signaling pathway
tdw04621
NOD-like receptor signaling pathway
tdw04622
RIG-I-like receptor signaling pathway
tdw04623
Cytosolic DNA-sensing pathway
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130414172 (irf7)
04621 NOD-like receptor signaling pathway
130414172 (irf7)
04622 RIG-I-like receptor signaling pathway
130414172 (irf7)
04623 Cytosolic DNA-sensing pathway
130414172 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130414172 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130414172 (irf7)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130414172 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Forkhead
Motif
Other DBs
NCBI-GeneID:
130414172
NCBI-ProteinID:
XP_056595894
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All DBs
Position
24:11516623..11521982
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AA seq
414 aa
AA seq
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MTTQWSSTVAKPQFGPWLIQQVESRQYEGLYMMSPDTFRIPWKHNARRNLEDEDVKIFKE
WAIVSGKIKENPANKAKWKTNFRCALEGQKMFKKIADNSKDQDKPHKVYCIISPQGTQNA
EPIQNPIFIPQIYADQTSQNMEQDLYNPMETMCINQQDPVPQILDTLPSPQNGYPVSGAQ
FLQNNTPLPVQPPYTTAYQHNLPSFCNLEITINYRKTEVSKTVLDSHLVQFHYQCNPSEV
RGHPIPFPSIEKLIDHKQIYYTQRLLDSIQRGLLLEVNQYGIYGFRQDMCNVFVCTSDPS
EIQNPEPQKLRQNIREQLFSFEKYISDLREFKGNRRGSPDYTIYLCFGEKLPDGKPLQKK
LIVVKVVPLICRELHARAQLDGASSLQNDNVSLQISHNSLYELINSLGPPSMDI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacagtggagcagcacggttgctaaacctcagtttggcccgtggcttatacag
caggtggaaagcagacagtatgaggggttatacatgatgtcccctgacacattcaggatc
ccatggaaacacaacgcacgcagaaacctcgaagacgaggatgtgaaaatattcaaggaa
tgggctatagttagcggaaaaatcaaagagaaccctgccaacaaagcaaaatggaagact
aatttccgttgtgcgctcgaaggccagaaaatgtttaagaaaatagcggacaactccaaa
gaccaggataaaccacacaaagtctattgcatcatcagtccacaagggactcagaatgca
gagccgattcaaaacccgatatttattcctcagatctacgctgatcaaacgtctcagaac
atggagcaggacttgtacaatccgatggaaactatgtgcataaatcaacaagatccagtg
ccccaaatattggataccttaccgagtccccaaaatggctaccctgtctcaggtgcgcag
ttcttacagaacaacacgcctcttccagttcaaccaccatacactacagcatatcaacat
aaccttccatctttctgcaacctggagatcacaattaactacagaaaaaccgaggtctct
aaaactgtcctggattcacatcttgtacagtttcactaccagtgcaatccctccgaggtg
agaggacatcccatacccttcccgtccatcgagaaactcatcgaccacaaacagatctat
tacactcaacggttacttgacagcattcagagaggcctgcttctggaagtcaaccagtat
ggcatttacggcttccgtcaggacatgtgcaacgtcttcgtctgcaccagcgacccctct
gagatccaaaacccagaaccccaaaaactgcgtcagaacatcagagagcaattgttcagc
ttcgaaaagtacatcagcgatcttagggaattcaaagggaacagaagggggtcgccggat
tacaccatctacctgtgctttggggagaaacttccggacggaaagccattgcagaagaaa
cttatcgtggtcaaagttgtgccgctgatatgccgcgaacttcacgccagagctcagcta
gacggagcgtcgtctcttcaaaacgataacgtcagcctgcagatctcccacaacagcctt
tatgaactgattaattctttgggtccgccttccatggacatatga
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