Triplophysa dalaica: 130414206
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Entry
130414206 CDS
T09616
Symbol
hcn4l
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130414206 (hcn4l)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
130414206 (hcn4l)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
130414206
NCBI-ProteinID:
XP_056595968
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Position
24:8695672..8716956
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AA seq
1188 aa
AA seq
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MDKVHSSMRERLYSLPHQFGHKGAMTRDGEDGDKDTRRKSVKMKHLPSPSSIGSTKGVSE
AKSGDAETDVGRPFRTNVNGDCRRFRGSLSSITSRHAPDADLAEQRLLITEGDASPEDDG
PLEQPGSGESEGAQGGRSEGVQQAASDEQSSFIKLEGIDEIVPDDERLYQAGFMHRQFGA
MLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLIMLLLMVGNLIII
PVGITFFKDEHTPAWIVFNVVSDTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVKYLRS
WFAVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQ
WEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVARNKMVNDT
WGQQYSYALFKAMSHMLCIGYGMHPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSL
DSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREE
IISFNCRKLVATMPLFANADPNFVTSMLTKLRFEVFQPRDYIIREGTVGKKMYFIQHGVL
TVLTKGSKETKISDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMR
RAFETVALDRLDRIGKRNSVLQHKVQRDLNSGVFNYQENEIIQQIVQHDRDMAHCAHLMK
TPPPAPHLAPAPSSHTPVIWAPLIQAPLQAAAATTSVAIALTRHPHLPHTLFRPPVPLLG
SLKDQPGFVKQFPTSLSGATAFGGTSSASSQFSSCMETPILDTLRTERSSTSTPLPQSSS
SLPSAITTTITTTTSSITESSINPYRSLASDGSKDFSVAQLHPQPHQLPPASFPSFAASL
PRFFQKAAVGGESIQLAIPPISTLTPLIAHSVSPILTQLHSAQTNTQPTKPCQDLTKVTR
TVSQSPIKGSPICSKSILEQVPIVPSQHPQTVLQPDVFYQLSQEPSALASLAQYGSGNAS
PCSTPSAWSPMCQSPMVEKMRISTHSHPASISGSQSSLPTAQTLFLPPSRPRERGGSLVD
LPSQNLSTVSITLPTPGPPEKSKLVGRGPKPPDLSQHRGSASGFSPLHSPPAVIKPFSSI
PGHVVLSRQTSKLSISQTASSGGSPGHESSDASAPSTPTLHPKLPSNL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtgcattcttccatgcgcgaacgactctacagcttgccacatcagtttgga
cacaagggtgctatgactcgagacggcgaagacggcgacaaggacactcggaggaagagt
gtcaaaatgaagcatcttccgtcaccctcttccattgggagcacgaagggtgtcagcgag
gccaagagtggagacgcggagaccgatgtggggagacccttcagaacaaacgtgaacggc
gactgccggaggtttaggggcagtctgtcttccatcaccagccggcatgccccagacgcg
gatctggcggagcaaaggctcctcatcaccgagggggatgccagccccgaggatgacggt
cccttggagcaacctggatctggagagagcgagggcgcacaaggtggtcgtagcgagggg
gtacagcaggcggcctccgatgaacagtcgagtttcataaagttggagggtatcgatgag
atcgtgccggacgatgagaggttgtaccaggctgggtttatgcacaggcagtttggagcg
atgcttcagccaggggtcaacaagttctcgcttcgaatgttcggaagcgaaaaggctgtg
gagcgcgagcaggaacgggtcaaatccgcaggcttttggattattcatccatacagtgac
ttcaggttctactgggatttgatcatgctcctcctgatggtgggcaacttgatcatcatc
ccagtaggcatcacattctttaaagatgaacacacccccgcctggatagtcttcaatgtt
gtctctgacacgttcttcctggtggacctggtgttgaacttccgcacggggatcgtgaag
gaagacagcacggaaatcatcctggaccctcagcagatcaaggtgaagtacctgcggagc
tggttcgccgtggattttatctcttccatccctgtggattacatcttccttatcgtggag
acgcgcatcgactcagacttctacaagacggcgagggcgttgaggattgtgcgttttaca
aaaatactcagtctgctgaggctgctgagattgtcaagactgattcgatacatccaccaa
tgggaggagatatttcacatgacctatgaccttgcgagtgccatggtgcgcattgtgaat
ctgatcggaatgatgctgttgttgtgccactgggacggctgtctgcagttcctcgtgccc
atgctgcaggacttcccctcagactgctgggtggccagaaacaaaatggtgaatgacacg
tggggtcagcagtactcttacgccctctttaaggccatgagccacatgctgtgcatcggc
tatggcatgcaccctcccgtgggcatgacggatgtttggctgaccatcctcagcatgatt
gtgggcgcaacctgctatgccatgtttgtgggccacgcaactgccctcattcaatcactg
gactcctcacgaaggcagtaccaggagaaatacaaacaggtagagcagtatatgtccttc
cacaaacttccagcagacatgcggcagaggatccacgattactatgagcatcgctatcag
gggaagatgtttgatgaggagagcattctgggagaactgaacgagccactcagagaggaa
atcatcagttttaactgtcgaaagcttgtggccaccatgcctttgttcgccaatgcagat
cccaactttgtgacttcaatgctcaccaagttgcgtttcgaagtgttccagccaagagat
tacattatcagagaagggacagtgggaaagaagatgtatttcatccaacacggcgtactt
actgtcctgacaaagggcagcaaagagacaaagatctcggacggttcttactttggagag
atctgcttgctcacccgaggtagaagaacagccagtgtccgagcggacacatactgtcgt
ctttactcgctctctgtggaccatttcaatgaggtgttggaggagtaccccatgatgcga
cgtgccttcgagactgtggctcttgatcgccttgaccgcataggaaagaggaattcggtg
ctccaacacaaggtccaacgggatctgaattccggagtgttcaactatcaagagaacgag
atcatccagcagattgtgcagcacgacagggacatggcccattgtgcccacctgatgaaa
acacctcccccggctccacacctagcacctgcaccatcatcccacactccagtcatctgg
gcgcctcttatccaggctcctcttcaagctgccgcagccacaacttcagtcgccatcgcc
ttgactcgccacccccatctgcctcatacgctcttccgcccccctgtcccgctgcttggc
tctttgaaggaccaaccagggtttgttaaacagttcccgacatctctgtcaggcgcaact
gcatttggtggcacctcatcggctagctcgcagtttagctcttgtatggagaccccaatt
ctggacacgctcaggactgagagatcttctacctccaccccactaccacaatcgtctagt
tctctaccatctgctatcaccacaaccatcaccaccaccacttccagcatcacagagtct
tccattaatccctatagatctcttgcctctgatggctctaaagactttagtgttgcccag
cttcatcctcagccacatcagcttcctccggcctcattccccagctttgctgcatccctt
ccaaggttcttccaaaaagcagccgttggaggagagtccatccagcttgcaattccccct
atatccaccctcacccctttgatagcacattcagtaagtcccatactgacccaactgcat
tcagcacagactaatactcaacctacaaaaccttgtcaggacttgactaaagttactagg
acagtttcccaatctcctataaaagggtcccctatctgctccaagagcatactagaacaa
gtcccaattgtcccatcccagcaccctcaaactgtcctacagcctgacgttttctaccag
ctgtcccaagaaccatctgctcttgcttccttagcacaatatgggtcaggaaatgcatcc
ccgtgtagcaccccttcagcttggagccccatgtgccagagtcctatggtggagaagatg
aggatttccacgcatagccatcctgcaagcatctctgggtcccaaagctctctcccgacc
gctcagacactatttctgccaccgtcccgaccaagagaaaggggtggatcactggttgat
ttaccttcccagaacttaagcaccgtttctattacccttccaactccaggaccgcctgaa
aagtccaagctggttggacgaggacctaaacctccggacttatcacagcatagaggatca
gcttcaggtttttcacctctccactcaccccctgctgttatcaaaccatttagctcaata
cctggtcacgttgttttatcaagacaaacttcaaagttgtctataagtcagactgcgtcc
tcaggtggatcgccgggtcatgaatctagtgatgcatccgcccctagcacaccaactttg
cacccaaaactcccatcgaacttgtga
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