Triplophysa dalaica: 130414212
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Entry
130414212 CDS
T09616
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03022
Basal transcription factors
tdw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130414212 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
130414212 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130414212 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130414212 (gtf2h1)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130414212 (gtf2h1)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130414212 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
130414212
NCBI-ProteinID:
XP_056595984
LinkDB
All DBs
Position
24:complement(180802..185627)
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AA seq
549 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFPVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESSTFHFANESTALKDRDATKELLQQLLPRFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLSSVEHSLSNDSKQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPTVKQKYAENVPHNLTEKEFWTHFFQSHYFHRDRLNTGQQ
DIFSECAKQDEKGLKSMVTQGVKNPMVDLLALEDKTLDEGYGTAAAPSTSNVTKTLRENS
NCAIIKRFNHHSAMVLAAGLRRAEPCSDQTSETSSTDGNSRDSDFFQPPLKKVKLQEAIE
YDDLQSDCRRKPISLNLKKSDRYSHGPVPLQSQPYTSSQDILNSIAVIQQEMKSYKPRLT
QVMSSSAASSAITSLSPGGVLMQGGSQQTVNQLVPSDLQSELKHLYTAAGELLRHFWTCF
PVNTLFLEEKVVKMQSNLERFQLTKLRPFQEKIQRQYLSANLTAHLEEMLQAAYSKFQAW
QSRRMMRKT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtcagaggaggtgttgttggtggtgaagagggtccgtcagaggaagcag
gatggaactctatatctgatggctgagcggatcgcctggggtccggaggggaaggaccgc
ttccctgtcagccatctgtacgctgacatccgctgtcagaagatcagtcccgacggcaaa
gcaaagatccagcttcagttggttctgcacacgggcgaaagcagcacttttcattttgcc
aatgagagcacggcactgaaggacagagacgccaccaaagaactcctacagcaactcctg
cccaggttcaagaagaaagccaacaaagagctggaggagaagaataggatgctgcaggaa
gaccccgttctgtttcagctctacaaggatttggtggtgagtcaggtgatcagcgctgag
gagttctgggccaatcggctgagcttgagttctgtagagcactctctttccaacgacagc
aaacaggaagtgggcatctctgctgccttcctggccgacatcagaccgcagacagacggc
tgcaacggtctgcgctacaacctgacgtctgacatcatcgagtcgatctttagaacctat
cctaccgtgaagcagaaatacgccgagaacgttccgcacaacctgaccgagaaagagttc
tggacacacttctttcagtctcattacttccacagagatcgactcaacacgggccagcag
gacatcttctccgagtgtgccaaacaggatgagaaaggtctgaagtcgatggtgactcag
ggtgtgaagaaccccatggtggatctgctcgctctggaggataaaacattagatgagggc
tacggcacagcggcggctccctccacctcaaacgtgaccaaaacactgagagaaaacagc
aactgtgccattatcaaacgcttcaatcatcacagtgccatggtgctcgccgccggcctg
cgcagagcggaaccctgcagtgatcagaccagtgaaaccagcagcactgatggaaactcc
agagactcagatttcttccagcctcctctgaaaaaggtgaaattacaggaagccatcgaa
tatgatgatctgcagagtgactgccgccgcaaacccatttctctgaacctgaagaaatct
gacagatattctcacggtccggttcctctgcagtcacagccgtacaccagcagtcaggac
atcttaaactccatcgctgtcatccagcaagagatgaagagttataaaccccgcctgact
caggtgatgtccagcagtgcggcgagctcggccatcacgtctctctctcctggaggcgtt
ctgatgcaggggggaagtcaacagactgttaaccagttagtgcccagtgaccttcagagc
gagctgaagcatctgtatacagcggctggagaactcctccgacacttctggacatgtttc
cctgtgaacactctgttcctggaggaaaaggttgttaagatgcaatccaacctggaacga
tttcagttgactaaactccgcccctttcaagagaagatccaacggcagtatttgagcgct
aatctcacggctcatctggaggaaatgcttcaggctgcgtacagtaaattccaagcctgg
caaagccgtcgaatgatgaggaagacctga
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