Triplophysa dalaica: 130414221
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Entry
130414221 CDS
T09616
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130414221 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdw03032
]
130414221 (polg)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130414221 (polg)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130414221 (polg)
DNA replication proteins [BR:
tdw03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
130414221 (polg)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
130414221 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
130414221
NCBI-ProteinID:
XP_056595995
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Position
24:complement(3669254..3677202)
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AA seq
1185 aa
AA seq
DB search
MIHRLISRYRWQTFGQRCSSTSVKPKSHQTRLNPLNIQMLSRNLQEQIFRGQTQEYAEED
IEVSIRHLEKHQLWGKETDLLPDVELKLPHMYGDDIDGHFRTLAQTQSLPYLDAASQLQG
AGLPDMPTEWAWEVGWTRYGVDGKSDRVDFPDEKALVFDVEVCMEEGQCPTLAVAVSPTA
WYSWCSKRLIEERYTWSSHLTLAELIPLETPTNSTRPPGGEWQERLVVGHNVSFDRAHIK
EQYLLKGSKLRFLDTMSLHMAVSGLTGFQRSLWMASKHGKRKGLQEVKEHMKRLGRRSEG
PKIGSWEWVDISSINNLADVHALYVGGEPLKKEARDVFVKGKMSDVRSNFQELMQYCASD
VQATHEVFTQQLPLFLERCPHPVTLAGMLEMGMCYLPVNQSWGRYLEDAQDTYEELQREM
KKSLMILADDACQLLEDDQYKDDPWLWDLDWDVQDFKQKKVPVSKKKAKQEEETTAALVN
NDIPYYWDDDFGPPSEEEENIPHPSGELLKKLKETISCLPKRRQHLPAHPGWYRKLCVKM
SEAKDWSPGASLISLQMRVTPKLMGLTWDGFPLHYTDQHGWGYLVPGRKDNLEISEDNEG
SVCPYREIDKVYKEYCEGKGKGQLECQDGPLSVDLMLTDSTVWQAVEEISRLEVSDDETH
TTGVPSKRSKSVHNGNSDCPYHHGNGPYNDVNIPGCWFFKLPHKDGNDNNVGSPFSKDFL
SKMEDGTLQARRGGTNGTRALEINKMISFWRNAQKRISSQMVVWLRRGEQPRTVSRHEDY
DEEGQYGAILPQVITAGTVTRRAVEPTWLTASNARKDRVGSELKAMVQVPPGYHLVGADV
DSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTAEAVGISREHAKVFNY
GRIYGAGQPFAERLLMQFNHRLSQQEAGSKARQMYALTKGLRRYHLSEEGEWLVKELKLE
VERDDDGTISLQELRRISKLATQSTRRKRKWNLAGKRVWAGGTESEMFNKLENIAHSDQP
ATPVLGCRISRALEPSAVKDEFITSRVNWVVQSSAVDYLHLMLVAMRWLFEEYDIDGRFC
ISIHDEVRYLVRSEDRDRAALALQITNLLIRCMFAYKLGMRDLPQSVAFFSAVDIDQCLR
KEVTMDCVTPSNPSGVERRYGIAQGDALDIYQIIEITKGSLAKGK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatacatcgtctgatatcacgttaccgatggcaaaccttcgggcaaagatgctcttcc
acctcagtaaagcccaaatcccatcagacccgtctgaacccgctcaacattcagatgctg
tccaggaacctgcaggagcagatcttccggggccagacgcaggagtacgcagaagaagac
atcgaggtcagcatcagacacttggaaaaacaccaactctgggggaaagagactgatctg
ttaccagacgtagaactcaaactaccccacatgtacggggatgacatcgacggacacttt
cgcaccctggcccaaacgcagagcctgccttacctggatgcggccagccagcttcagggc
gcagggctgcccgacatgcccacggaatgggcttgggaagtggggtggacgcgttacggg
gtggacggaaaaagcgacagggtggattttccagatgagaaggcgttagtgtttgatgtg
gaagtctgcatggaggaaggacagtgtccgacgctggccgtggcggtttctccaactgcc
tggtactcatggtgtagtaagaggttgatagaagaaagatacacctggtcaagtcacctg
actctggctgaacttattcctttggagacccccacaaactccaccagaccaccgggcggt
gagtggcaggagaggcttgtggttggacacaatgtgagctttgatcgagcgcacattaaa
gagcagtatttgctaaaaggatccaagttgcgtttcctggacaccatgagtctccacatg
gctgtctcggggctgacgggatttcagcggtctctctggatggctagcaagcacggcaag
agaaaaggcctgcaggaggttaaagagcacatgaagcgactcggccgacgctcggaggga
ccgaagattggatcatgggaatgggttgatatcagcagcattaataatcttgctgatgtt
cacgctctgtacgtcggcggagagccgctgaagaaagaagcacgagatgtttttgtgaag
ggaaaaatgtcggatgttcggtccaactttcaggagctgatgcagtattgtgcttcagat
gtacaggccacccatgaggtctttactcagcagctgcctttgtttttagagcggtgtcct
catcccgtgacgctcgcaggtatgctagaaatgggcatgtgctatcttcctgtcaatcag
agctgggggcggtacttggaggacgctcaggacacttatgaggagctgcagagggaaatg
aaaaaatcgttgatgattttggccgacgatgcctgccagttattggaggatgatcagtat
aaagatgacccctggctatgggatttggattgggacgttcaagacttcaaacagaagaaa
gtgcctgtaagtaagaagaaagccaaacaggaggaagagacgacagcagcgctagtgaat
aatgacatcccttattattgggacgatgactttggtcctccttccgaagaggaggagaat
attccacaccccagcggagaactacttaagaaactaaaggagaccatcagttgcctgcca
aagaggagacagcacttaccggcccaccccggatggtaccgtaagctgtgcgtgaagatg
tccgaagccaaggattggtctcctggagccagtctgatcagtctacagatgagggtcaca
cccaaactcatgggactgacttgggacggctttcccctgcactacaccgaccagcacgga
tggggttacctggtaccggggcgcaaagataacctggagatctccgaagacaacgaggga
tctgtatgtccttacagagaaatcgataaagtttataaggaatactgcgaagggaaaggg
aagggacagttggagtgtcaggatggcccgctttctgttgacctcatgttgacggatagc
accgtgtggcaggcggttgaagaaattagtcgtttggaagtgtctgatgatgaaacgcat
actacaggagtcccatccaaaaggtcaaagagtgttcacaatgggaacagtgactgccct
tatcaccatggaaatggaccctacaatgatgtcaacatccctggttgttggttctttaaa
ctgccacacaaggatggaaacgacaacaatgtgggaagcccgttctctaaagacttcttg
tccaaaatggaggacggtacgcttcaggcgaggcgggggggcacgaacggcacgcgggcc
ctggagatcaacaagatgatctcgttctggaggaacgcccaaaaacgcatcagctctcaa
atggtggtatggctgcgaagaggagagcagccacgcactgtcagcagacatgaagactac
gatgaggaaggacagtacggagctattttacctcaggtcatcacggctggaacggtcacg
cgcagagccgtagagccaacgtggcttactgccagcaatgcgcgaaaagatcgagtgggc
agtgaactgaaggccatggtgcaggtgccacctggttatcacctggtgggagcagatgtg
gattcccaagagctgtggatcgctgccgtactgggtgaagcccactttgctgggatgcat
ggctgcactgcgttcgggtggatgacacttcagggaaaaaagagtcaaggcacggatctg
cacagccgtaccgcagaggctgttggaattagccgcgagcatgccaaggtcttcaactac
ggcaggatttatggagccggccagccgtttgccgagcgactgctcatgcagtttaatcat
cgcttgagccaacaggaagcaggcagcaaagctcgacagatgtatgcacttaccaaagga
ctgcgcaggtatcatctgtctgaggaaggtgagtggttggtgaaggagttaaaactggag
gtggaaagagatgatgacggtaccatctcgctgcaggaactccgcaggatctcaaaacta
gcaactcaaagcacccgcaggaagaggaaatggaatctcgcggggaaacgcgtgtgggcg
ggcggcacggagtcggagatgttcaataaactggagaatatcgctcactctgatcaacca
gccactccggtgctaggctgcaggatctccagagccctggaaccttctgctgttaaagat
gagttcataacaagcagggtgaactgggtggtgcagagttctgctgtggattatcttcat
ctgatgttggtggcgatgcggtggttgtttgaggagtacgatatcgacggccgattctgc
atcagcattcacgacgaagtgcgttacctggtgcgcagcgaggatcgcgacagagctgcg
ctggccctacaaataaccaacctgcttatcaggtgtatgttcgcttataaactgggaatg
agagatctaccacagtcagtggctttcttcagcgctgtggatatcgatcagtgcttacgt
aaggaggtcaccatggactgcgtgactccatcgaacccttcaggagttgagcgaagatac
ggcatagcacaaggtgacgccttggatatctaccagattatagagatcaccaaaggatct
ttggctaaagggaaataa
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