Triplophysa dalaica: 130414257
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Entry
130414257 CDS
T09616
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04137
Mitophagy - animal
tdw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130414257 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130414257 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130414257 (amfra)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
130414257 (amfra)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130414257 (amfra)
Multi subunit type E3
ERAD complex
130414257 (amfra)
LMBR1L-GP78-UBAC2 complex
130414257 (amfra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
130414257
NCBI-ProteinID:
XP_056596056
LinkDB
All DBs
Position
24:13940007..13950967
Genome browser
AA seq
621 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSSVLLAGTILSAYSTVRDSQYNTALTEDPQSESHHEEIKL
GNLGNLATNVLLYLITDTMFVWVMVNTACCILMLIAKVIQCIVFGPLRVSEKQHLKDKFW
NFIFYKFIFIFGVLNVQRVDEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMGSH
VRVLALLVSILMCCGGIAVLCGLVGHLHGMHTVAFMAAECLLVTVRTGHVIIRYSIHLWD
LNHQGTWENKSSYIYYTDFIMELAILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH
EFQRRIRRHKNYLRVIDNMESRFAVATPDELVANNDDCAICWDSMTTARKLPCGHLFHNS
CLRSWLEQDTSCPTCRMSLNINEGTRERGEGQREPLDENMAAGPGVDARQHLNQHNHFFH
FDGSRIASWLPSFSVEVMHTTNILGIVHANNSQLNAMAHQIQEMFPQVPYHLILQDLQLT
RSVEVTTDNILEGRIQVPFPTQPVERSTIQVNPAHEESEGPGSSSEVIAEAEDFEVRGSR
FSKSADERQRMLLQRKEELLHRARRRYLNKKPDEEDLSFAVEHEEVQDFVEDEDSDSMIL
RRRRLAAAAERRMQRQSDPPL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagcgcttcccttggcccagcttacagacatacacagctctg
agctcagttctgcttgctgggaccatcttaagtgcctacagcactgtcagagactcgcag
tacaacactgccctgactgaggacccgcaaagtgaatcacatcatgaggagatcaagctg
ggaaatcttggaaacctggccaccaatgtgctactctatctcatcacagacactatgttt
gtctgggtgatggtcaacactgcgtgctgcatcctcatgttgatagctaaagtgatccag
tgcattgtgtttggaccattgagagtcagcgagaaacagcatctgaaagacaagttctgg
aacttcatcttctacaagttcatcttcatctttggtgtgctgaatgtgcagcgggtggat
gaggtggtgctctggtgtctgtggttctccatgctcatcttcctccatctgatggtgcag
ctctgtaaagaccgctttgaatatctgtcattttcccccaccacaccgatggggagtcac
gtacgtgtcttggctctgctggtgtctattctcatgtgctgtggtggtatagcagtactc
tgcggtcttgtcgggcatcttcatgggatgcacacagtggcttttatggcagctgagtgt
ttgctggtgacagtacgcacaggccatgttatcataaggtattccattcacctgtgggac
ctgaaccatcagggcacctgggaaaacaagagctcatatatctattacactgactttatc
atggagttggccattctctgtctggatctgatgcatcacatccacatgctgctctttggt
aacatctggttgtccatggccagtctggtgatcttcatgcagctgcgttatctcttccat
gagttccagaggagaattcgccgccataagaactacttgcgtgttattgacaatatggag
tcaaggtttgccgtggcaacgcccgatgagctggtggccaataatgatgactgtgccatc
tgctgggattcaatgactacagcacgcaagcttccctgtggacacctgtttcacaattcc
tgtctgcgatcttggctcgagcaagacacttcctgtcccacatgccgtatgtcactgaac
atcaatgaaggcacaagggagaggggggagggccagagagagccgctggacgagaacatg
gccgctgggccgggagtggatgcccgacagcatctcaaccaacacaaccacttctttcac
tttgatgggtcccgcattgccagctggctgcccagtttctctgtggaggtcatgcacacc
actaacatcctgggcatcgtgcatgctaacaactcgcagctcaacgccatggcccatcag
atccaggagatgtttccacaggtcccttatcacttaatcctgcaggatttacagctaaca
cgctctgtggaagtcaccaccgataacattctggagggaaggatacaggtgccttttcca
acacagcctgtggagcgctcaaccatacaagtaaaccctgcacatgaagagtcagagggt
cccggcagcagttcagaggtcattgctgaggcagaagacttcgaggtacggggcagccgc
ttttccaaatctgcagatgagaggcaaaggatgctgctgcagagaaaggaggagttactc
cacagagctcgcaggcgttatttaaacaagaagcctgatgaagaagatctctcctttgct
gtcgaacatgaggaggtacaagattttgtagaggatgaagactctgactcgatgatcctg
aggcgcaggaggctggcggctgcagcagagagacgcatgcagaggcagtcagacccacct
ctgtga
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