Triplophysa dalaica: 130414306
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Entry
130414306 CDS
T09616
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tdw
Triplophysa dalaica
Pathway
tdw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130414306 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130414306 (taf5)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130414306 (taf5)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130414306 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
130414306 (taf5)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130414306 (taf5)
STAGA complex
130414306 (taf5)
TFTC complex
130414306 (taf5)
SAGA complex
130414306 (taf5)
SLIK complex
130414306 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
VPS8_N
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
130414306
NCBI-ProteinID:
XP_056596129
LinkDB
All DBs
Position
2:6241380..6246065
Genome browser
AA seq
747 aa
AA seq
DB search
MTSLLRAPGKMAAVQDGSIELDTEKETKPEILSDGSANISGNAGSGVLSSSPPAGGAQKP
EDQQTLIAVLQFLRRNKLTESVDILKREAGLSDDQENSKATDAGGKGDGDAGDTNALLSR
VSITSAAAPQSAPLPLKSGDDQPDVRVILSAYSQQGEPPLYKVYYSDLKKFIESVLDCHR
AELSQLFYPLFVHMYLELVYNNNESEAKAFFDKFSGDQECYYQDDLRVLCGLTKKEHMKG
NETLLDFRTSRFVLRISRDSYQLLKRHLQERQNNQIWTIIQEHLYIDIFDGMPRSKSQID
SMSGSLAGEAKREVNKLKVYYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKAKKDSLGSK
SKKQDPNAPQQNRIPLPELKDSDKLDKIMYLKESTKRIRLSPENLPSICFYTFLNAYQGL
TAVDFTDDSSLLAGGFSDSTVRVWSVTPKKLRRVKSAAELSLIDKESDDVLERIMDEKTA
SESKVLYGHGGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQF
SPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTVRL
WDVLNGNCVRIFTGHKGPIHCLAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDIETDDFTAATGHIHLYDNSQELLLGSY
NSKSTSVVHLHFTRRNLLLAAGMYNSQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctgctccgtgcgccgggcaaaatggcggctgtgcaagatgggtcgatagag
ctggacaccgagaaagaaacaaagcccgaaattctcagcgatggttcggcaaacatctcg
ggaaatgcggggagcggggtgctttcctcgtcgccccccgccggcggagctcagaagccg
gaggaccagcaaactttgattgcggtgctgcagttcctgaggcggaataaattgacggag
tcggtggatattctaaagcgtgaagccggactgtcggacgatcaagagaactcaaaggct
actgatgccggagggaaaggtgatggcgacgctggagatacaaacgctttgctaagccgt
gtgtccatcacatcagcagccgccccccagagcgctcctctgcctcttaaaagtggggat
gaccagccagatgtcagagttatcttgtcagcatacagtcagcaaggagaaccacctctt
tataaggtttactacagtgacctgaagaaattcatagagtcggtccttgactgtcacagg
gccgagctgtcccagctcttctatcctctgtttgttcacatgtacctggagctggtctac
aacaacaacgagagcgaagccaaggctttcttcgacaagtttagcggtgatcaggaatgc
tactatcaggacgacctgcgtgttctctgtggcctcactaaaaaggagcacatgaagggg
aacgagactctgctggactttcgcaccagccgcttcgtgctccggatctcccgtgactcg
taccagctgctcaagaggcacctgcaggagaggcaaaataaccagatatggaccatcatt
caggagcacctgtatattgacatctttgacggcatgccccgcagcaagagtcagatcgac
agcatgtctggtagtctcgccggagaggccaagcgagaggttaacaagctcaaggtatac
tatgggctgctaaaggaaccagagatcgaggtccctctggacgatgaagatgaggaagcg
gagaacgaggaaggaaagcccaagaagaagaaagctaagaaggacagcttgggctcaaag
agcaaaaaacaagatcccaatgcacctcagcagaacaggattcctctgccagagctgaaa
gactcagacaagctggataagatcatgtatttgaaggagagcactaaacgaatccgactc
agtccagagaacctgccttccatttgtttctacacattcctaaatgcctaccagggtttg
acggcagtagacttcacagatgactcaagtctactagcgggagggttttccgattccacc
gtcagagtgtggagtgtcacgcccaaaaagttacgcagggtcaagtctgcagcagaactg
agtctgattgataaggagtcggatgatgttcttgaaaggatcatggatgagaagacagcc
agtgagtctaaggtcctctacggtcacggcgggccggtgtatggtgtcagctttagcccg
gacaggaactatttgttatccagttctgaggatggtacaatcaggctgtggagtctgcag
acgtttacttgtctcgtggggtataaaggacacaattatccagtgtgggatacccagttt
tcaccctttggttattattttgtgtctggaggacatgatagagttgcacgcctctgggcg
acagatcattaccagccactgcggatatttgctggccatctagctgacgtcacctgcaca
cgctttcaccccaacgctaactacgtggcaacaggctccagcgatcgcaccgtgcgcctc
tgggatgtcctgaatgggaactgcgtccgaattttcacaggtcacaaggggcccatccat
tgtcttgctttctcacccaatggaaaattcttggcatctggtgcaacagatggacgagta
ctgttatgggatatcggacacgggctgatgatcggagagctcaagggtcacacagacacg
atttattccctcaggtttagcagagatggagaaattcttgcatcaggctctatggataat
acagtacgcctgtgggatgctatgaaggcttttgacgacatagagacagacgatttcact
gcagcaaccggacacattcacctgtatgataactcgcaggagctcctgctagggtcgtac
aattccaaatccacatctgtcgtccacctgcacttcaccagacgcaacctgttgctggcc
gcagggatgtacaactcccagtga
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