Triplophysa dalaica: 130414321
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Entry
130414321 CDS
T09616
Symbol
bmal1a
Name
(RefSeq) basic helix-loop-helix ARNT like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130414321 (bmal1a)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130414321 (bmal1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
130414321
NCBI-ProteinID:
XP_056596145
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Position
24:complement(6992297..7002257)
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AA seq
626 aa
AA seq
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MADQRMDISSTMNEFMSQSSADLISSSIGSSGMDYNRKRKGSTTEYQIDGFSFDDSMDTD
KDKSLGRDDQPGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLR
MAVQHMKTLRGASNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESV
YKILNYTQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGP
SRLCSGARRSFFCRMKCNRPSVKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKM
GLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNGDIRVKPTEYVSRHAIDGKFVFVDQR
ATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITL
RSRWFSFMNPWTKEVEYIVSTNTVVSGSMVDGADPSFSQSASSPQSMDSVLTSGDGGGRR
ALQIVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCSSSPLNITTTPPPDTCSPG
SKKIQNGGTPDLPSAGIVPGPDSIGYPYSNNSLMSDNSHLSIDIMEEPGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcctccacgatgaacgagttcatgtcccagagctcc
gcagatctcatcagtagttctatcggcagctcgggcatggattacaaccgcaagagaaag
ggcagcaccaccgaatatcaaattgatggcttttcatttgacgatagcatggacacagac
aaagacaagtcgctcggaagagacgaccaaccaggccggatcaaaaacgccagggaagct
cacagtcagatcgagaagagacgcagggataaaatgaacagttttatagatgagctggca
tctttagtgcccacctgtaacgccatgtctcgcaagttagacaaactcactgtacttcgc
atggccgtccaacatatgaagacgttacgaggggcttcaaacccttacacagaagcaaac
tacaaaccagcattcttgtcggacgatgaattaaagcacttaattttaagggctgccgat
ggctttctctttgtagtcggttgtgatcgtggaaagatcctttttgtctcagagtctgtt
tacaaaattctcaattacactcagaatgatctgattggtcagagtttgtttgactacttg
catccgaaagacatcgccaaagtaaaagagcagctgtcgtcgtcagatacagctccacga
gaacgactcattgatgccaaaactggtcttccagtgaagaccgacatcacacccggaccc
tccagactgtgttcaggggctcgccgatccttcttctgtagaatgaaatgcaaccgccct
tctgtcaaaatggaggacaaggattttccctcaacttgctccaaaaagaaagcagaccga
aagagtttctgcactattcacagtaccggctaccttaaaagttggccgcccaccaagatg
ggtttggacgaggacaatgaacctgataatgagggctgtaacctcagctgtctggtggcc
atcggccgtcttcatccgcacatcgtcccgcagcccatgaacggcgacatccgcgtcaaa
cccacggaatacgtctcccgccacgccatcgatggcaagtttgttttcgtggatcagagg
gcgacagccatccttgcgtacttgccccaggagcttctaggaacatcattttacgagtat
ttccatcaggatgacatcggccacctcgcagagtgtcacagacaagtgctacagatgaga
gaaaaaatcaatacaaactgttacaagttcaagataaaggacggttccttcatcaccctg
agaagccgatggttcagcttcatgaacccttggaccaaagaggtggaatatatagtctct
acaaacactgtcgtttcaggcagtatggttgatggagcagaccctagtttttcacagtcc
gcttcgtctcctcagagcatggacagcgttttaacatcaggagatggtggagggagacgt
gcccttcagatcgttcctggtataccaggagggacgagagcaggagctgggaaaattgga
cgcatgatcgcagaggaagtgatggagattcagaggattcgaggctcctccccttccagc
tgtagttccagtcctttgaacatcaccaccacacctccacctgacacctgctctccgggc
agcaaaaagattcagaatggcggtactccagatctgccttcagcaggaatcgtgcctggt
ccagattcaataggatacccatattcaaacaattctttaatgagtgataactcccatctt
agtattgacatcatggaagaaccaggatccagcagccccagcaacgacgaggcagccatg
gccgttatcatgagcctcctggaagctgacgctggcttgggtggacctgtggatttcagc
gacttgccatggcctttgtga
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