Triplophysa dalaica: 130414324
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Entry
130414324 CDS
T09616
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130414324
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130414324
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
130414324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130414324
NCBI-ProteinID:
XP_056596148
LinkDB
All DBs
Position
24:complement(1367702..1391811)
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AA seq
715 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGRDLSRASHEEAVEAFRSAKDPIVVQVLRRTPLPR
GQAQDVQVVDVCTQTEITFEHIMALAKLRPTTPPVPDICPFLLSDSCHSLHSADQENFED
GQYLNTMIVDGERPDDFEYEEVELCRMNSEEKLGLTLCYRTDDEEDIAIYVSEIEPNSIA
ARDGRIREGDRILQINGRDVQDKQESVAVLSNEECRNIVLLVCRPEIQEPWLDDEHSEFL
EELKMEMLEEQRREEEEMDRAAREEEEKAARIQEDITASCSYNQTGQKDGSEKNVLAQIQ
KRLSRCLRQRRDAAGQSRDCPVTGRVSGEGVEDKVTDGDCYQQLLELKCQIRNSGEYDLF
YRRSSTIECSLREQSSGVQHELRLLNEELCSIELECQNIMQAHQLRTQNQGPRSPRHAGK
LADISEHPEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSVQRMITLTNQKNLKSSFLAGR
GSPPCPPVRRAPSGSPDHSNPSESDQTPPADDERSLHSCIPRHQQTDHARHYQSVVHLIQ
QQSAVEYAHSLLSGPQAPLPSEPKMEWKVKVRSDGTRYITKRPVRDRLLRERALKIKEER
SGGMTTDDDAMSEMKMGRYWSKEERKQQLLRAKEQRRRREFMQQSRLECLRENPQSGGEG
RKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPEASKVHNAFLSVTTV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgtagtttacagaagagagaggagcattacaaactactgtatgag
atctcacaggtgaatggcagagatctctcgagagcgagtcatgaagaggcggtcgaggct
ttccgcagcgctaaagaccccatcgtggttcaggtgctccgccggacccctctgccccga
ggtcaagcccaggacgtccaggtggtggacgtgtgcacacaaaccgaaatcaccttcgag
cacatcatggctctggccaaactccgtcctacaacaccgcctgtgccggatatctgtccc
tttctcctgtcagacagctgtcactctctgcattctgctgatcaggagaactttgaggat
ggccagtatcttaacacaatgattgtggacggagagagacctgatgactttgagtatgag
gaggtggaactgtgtcgaatgaacagcgaggagaagctcggcctcacgctgtgttacaga
acggatgatgaagaagatatcgctatatacgtcagcgagatcgaaccgaacagcatcgcc
gcccgagatggtcgcatccgagaaggcgaccgtattttacagattaatgggagggacgtt
caggacaaacaggaatctgtggccgttttgtcaaatgaagaatgcagaaatattgtgctg
ctcgtgtgcaggcctgaaatacaggagccgtggcttgatgatgaacacagcgagttctta
gaagagctgaagatggagatgctggaagaacagagaagagaagaagaggagatggataga
gccgcaagagaagaagaagagaaggccgcaagaatccaagaagacatcacagcctcctgt
tcttataatcagaccggtcaaaaagacggctccgaaaagaatgttctcgcccaaatccaa
aagcgtctctcgcggtgtttacggcagcggcgcgatgctgcgggtcaaagccgtgactgt
ccggtgacgggtcgggtctccggtgagggagtggaagacaaagtcactgatggagattgt
taccagcagctcctcgagctcaagtgtcaaatccgcaacagcggcgagtacgacctcttc
tacagacgcagcagcaccatcgaatgcagtctgcgggagcagagcagtggcgttcaacac
gagctgcgtctgctcaacgaggaactgtgcagcatcgagctggaatgccagaacatcatg
caagcgcatcaactgcgtacgcaaaaccaaggtccccggagccctcggcacgccgggaag
ctggccgacatcagcgagcacccggaaaagtcagacaaggacagttcgagtgcatacaat
acggcggagagctcccgcagtactccgctagccatggaccgctctccagaacattccgtg
cagaggatgatcactttgaccaaccagaagaacctcaagagtagtttccttgccggacgc
ggttcgcccccctgtccgcccgtcaggagagcgccgagcggcagtccggatcacagcaac
ccctcggagtccgaccaaactcctcctgcggacgatgagaggagccttcactcgtgcatc
ccgcgccaccagcaaacggatcatgcccgacattaccagagcgttgtgcacctgatccaa
caacaatccgctgtggagtacgcccacagtctgctgagcggtccgcaggcccctctgccg
tccgaacccaagatggagtggaaggtcaaggtgagaagcgacggcacaaggtacatcacc
aagcggccggtccgagaccgactgctccgcgagcgagccctcaaaatcaaggaggagcgc
agcggaggtatgacgacggacgatgacgccatgagcgagatgaagatgggacgctactgg
agcaaagaggagcggaaacaacagctcctgcgggctaaagagcagcgccggcgacgggag
ttcatgcagcagagtcgactggagtgtctgcgggagaatcctcagagcggcggcgagggc
cgtaaggaggtcagcatcatcgaactcagccatcgtaagatgatgaagaaacgcaacaag
aagattctggacaactggatgaccattcaggaactgatgacgcacggcgccaaagcgcca
gaagcttccaaagtccataacgcctttctttccgttacaactgtatag
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integrated database retrieval system
